RNA–Protein interactions for RNA: ENST00000592826.1

APBA3-208, Transcript of amyloid beta precursor protein binding family A member 3, humanhuman

TSL 2

Gene APBA3, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBA3-208ENST00000592826 NISCHQ9Y2I1 1504 aa54.34■■■■■ 6.29
APBA3-208ENST00000592826 CCDC180Q9P1Z9 1646 aa48.3■■■■■ 5.32
APBA3-208ENST00000592826 ABCC9O60706 1549 aa47.96■■■■■ 5.27
APBA3-208ENST00000592826 RB1CC1Q8TDY2 1594 aa45.65■■■■■ 4.9
APBA3-208ENST00000592826 NACADO15069 1562 aa45.45■■■■■ 4.87
APBA3-208ENST00000592826 DCAF8L2P0C7V8 631 aa45.38■■■■■ 4.86
APBA3-208ENST00000592826 ZCCHC6Q5VYS8 1495 aaKnown RBP45.26■■■■■ 4.84
APBA3-208ENST00000592826 MYO15BQ96JP2 1530 aa45.26■■■■■ 4.84
APBA3-208ENST00000592826 DNAJC5BQ9UF47 199 aa45.09■■■■■ 4.81
APBA3-208ENST00000592826 DCAF1Q9Y4B6 1507 aa45.06■■■■■ 4.8
APBA3-208ENST00000592826 PABPN1Q86U42 306 aaKnown RBP eCLIP44.6■■■■■ 4.73
APBA3-208ENST00000592826 UNC13AQ9UPW8 1703 aa44.55■■■■■ 4.72
APBA3-208ENST00000592826 BICRAQ9NZM4 1560 aa44.26■■■■■ 4.68
APBA3-208ENST00000592826 SCRIBQ14160 1630 aa43.96■■■■■ 4.63
APBA3-208ENST00000592826 SHROOM4Q9ULL8 1493 aa43.77■■■■■ 4.6
APBA3-208ENST00000592826 CC2D2AQ9P2K1 1620 aa43.33■■■■■ 4.53
APBA3-208ENST00000592826 CECR2Q9BXF3 1484 aa43.25■■■■■ 4.51
APBA3-208ENST00000592826 EIF4G1Q04637 1599 aaKnown RBP43.21■■■■■ 4.51
APBA3-208ENST00000592826 BAZ1AQ9NRL2 1556 aaPredicted RBP42.14■■■■■ 4.34
APBA3-208ENST00000592826 SMARCA4P51532 1647 aa42.12■■■■■ 4.33
APBA3-208ENST00000592826 NCAPD3P42695 1498 aa41.95■■■■■ 4.31
APBA3-208ENST00000592826 SMARCA2P51531 1590 aa41.92■■■■■ 4.3
APBA3-208ENST00000592826 ATAD2BQ9ULI0 1458 aa41.92■■■■■ 4.3
APBA3-208ENST00000592826 MROH2BQ7Z745 1585 aa41.81■■■■■ 4.28
APBA3-208ENST00000592826 PEG3Q9GZU2 1588 aa41.77■■■■■ 4.28
APBA3-208ENST00000592826 HMGXB3Q12766 1538 aa41.71■■■■■ 4.27
APBA3-208ENST00000592826 DNAJC5Q9H3Z4 198 aa41.63■■■■■ 4.25
APBA3-208ENST00000592826 BAZ1BQ9UIG0 1483 aaKnown RBP41.58■■■■■ 4.25
APBA3-208ENST00000592826 CUX2O14529 1486 aa41.48■■■■■ 4.23
APBA3-208ENST00000592826 ERCC6Q03468 1493 aa41.47■■■■■ 4.23
APBA3-208ENST00000592826 RSF1Q96T23 1441 aaPredicted RBP41.42■■■■■ 4.22
APBA3-208ENST00000592826 WIZO95785 1651 aa41.34■■■■■ 4.21
APBA3-208ENST00000592826 NESP48681 1621 aa41.12■■■■■ 4.17
APBA3-208ENST00000592826 TOP2AP11388 1531 aaKnown RBP40.98■■■■■ 4.15
APBA3-208ENST00000592826 LAMC3Q9Y6N6 1575 aa40.91■■■■■ 4.14
APBA3-208ENST00000592826 THOC2Q8NI27 1593 aaKnown RBP40.78■■■■■ 4.12
APBA3-208ENST00000592826 CADPSQ9ULU8 1353 aa40.73■■■■■ 4.11
APBA3-208ENST00000592826 PDS5BQ9NTI5 1447 aa40.68■■■■■ 4.1
APBA3-208ENST00000592826 KIF21AQ7Z4S6 1674 aa40.62■■■■■ 4.09
APBA3-208ENST00000592826 CCDC88BA6NC98 1476 aa40.5■■■■■ 4.07
APBA3-208ENST00000592826 CFTRP13569 1480 aa40.47■■■■■ 4.07
APBA3-208ENST00000592826 SUPT5HO00267 1087 aaKnown RBP40.38■■■■■ 4.05
APBA3-208ENST00000592826 MRC2Q9UBG0 1479 aa40.32■■■■■ 4.04
APBA3-208ENST00000592826 WDR62O43379 1518 aa40.21■■■■■ 4.03
APBA3-208ENST00000592826 FANCD2Q9BXW9 1451 aa40.19■■■■■ 4.03
APBA3-208ENST00000592826 CEP164Q9UPV0 1460 aa40.15■■■■■ 4.02
APBA3-208ENST00000592826 PRDM2Q13029 1718 aa40.09■■■■■ 4.01
APBA3-208ENST00000592826 URB2Q14146 1524 aaKnown RBP39.74■■■■□ 3.95
APBA3-208ENST00000592826 ABCC8Q09428 1581 aa39.69■■■■□ 3.94
APBA3-208ENST00000592826 TRIM41Q8WV44 630 aa39.68■■■■□ 3.94
APBA3-208ENST00000592826 OSCARQ8IYS5 282 aa39.56■■■■□ 3.92
APBA3-208ENST00000592826 TOPBP1Q92547 1522 aa39.55■■■■□ 3.92
APBA3-208ENST00000592826 DNMBPQ6XZF7 1577 aa39.51■■■■□ 3.92
APBA3-208ENST00000592826 IFT140Q96RY7 1462 aa39.35■■■■□ 3.89
APBA3-208ENST00000592826 CUX1P39880 1505 aa39.23■■■■□ 3.87
APBA3-208ENST00000592826 ZNF608Q9ULD9 1512 aaPredicted RBP39.22■■■■□ 3.87
APBA3-208ENST00000592826 POLA1P09884 1462 aaPredicted RBP39.21■■■■□ 3.87
APBA3-208ENST00000592826 FGD5Q6ZNL6 1462 aa39.11■■■■□ 3.85
APBA3-208ENST00000592826 SOGA1O94964 1423 aa39.11■■■■□ 3.85
APBA3-208ENST00000592826 TARBP1Q13395 1621 aaKnown RBP39.08■■■■□ 3.85
APBA3-208ENST00000592826 WRNQ14191 1432 aaPredicted RBP eCLIP39.07■■■■□ 3.85
APBA3-208ENST00000592826 EIF4G3O43432 1585 aaKnown RBP39.03■■■■□ 3.84
APBA3-208ENST00000592826 RIMBP3CA6NJZ7 1639 aa39.01■■■■□ 3.84
APBA3-208ENST00000592826 RIMBP3BA6NNM3 1639 aa39.01■■■■□ 3.84
APBA3-208ENST00000592826 RIMBP3Q9UFD9 1639 aa39.01■■■■□ 3.84
APBA3-208ENST00000592826 RAD54L2Q9Y4B4 1467 aa39■■■■□ 3.83
APBA3-208ENST00000592826 TOP2BQ02880 1626 aa38.96■■■■□ 3.83
APBA3-208ENST00000592826 BIVM-ERCC5R4GMW8 1640 aa38.93■■■■□ 3.82
APBA3-208ENST00000592826 WDR97A6NE52 1622 aa38.92■■■■□ 3.82
APBA3-208ENST00000592826 ARHGEF11O15085 1522 aa38.88■■■■□ 3.81
APBA3-208ENST00000592826 AQRO60306 1485 aaKnown RBP eCLIP38.87■■■■□ 3.81
APBA3-208ENST00000592826 SYNJ1O43426 1573 aa38.87■■■■□ 3.81
APBA3-208ENST00000592826 TDRD9Q8NDG6 1382 aaKnown RBP38.82■■■■□ 3.81
APBA3-208ENST00000592826 ABCA10Q8WWZ4 1543 aa38.8■■■■□ 3.8
APBA3-208ENST00000592826 CHD1O14646 1710 aa38.77■■■■□ 3.8
APBA3-208ENST00000592826 FBLN2P98095 1184 aa38.66■■■■□ 3.78
APBA3-208ENST00000592826 GRIN2BQ13224 1484 aa38.65■■■■□ 3.78
APBA3-208ENST00000592826 GAPVD1Q14C86 1478 aa38.64■■■■□ 3.78
APBA3-208ENST00000592826 CYB5RLQ6IPT4 315 aa38.6■■■■□ 3.77
APBA3-208ENST00000592826 ABCA5Q8WWZ7 1642 aa38.57■■■■□ 3.77
APBA3-208ENST00000592826 MAGI1Q96QZ7 1491 aaPredicted RBP38.55■■■■□ 3.76
APBA3-208ENST00000592826 SNAPC4Q5SXM2 1469 aa38.51■■■■□ 3.76
APBA3-208ENST00000592826 ARAP1Q96P48 1450 aa38.47■■■■□ 3.75
APBA3-208ENST00000592826 PBRM1Q86U86 1689 aa38.46■■■■□ 3.75
APBA3-208ENST00000592826 CHMP7Q8WUX9 453 aaPredicted RBP38.41■■■■□ 3.74
APBA3-208ENST00000592826 SYNJ2O15056 1496 aa38.39■■■■□ 3.74
APBA3-208ENST00000592826 ERICH3Q5RHP9 1530 aa38.35■■■■□ 3.73
APBA3-208ENST00000592826 CLASP1Q7Z460 1538 aa38.33■■■■□ 3.73
APBA3-208ENST00000592826 KIF27Q86VH2 1401 aa38.3■■■■□ 3.72
APBA3-208ENST00000592826 TRHP20396 242 aaPredicted RBP38.24■■■■□ 3.71
APBA3-208ENST00000592826 FHAD1B1AJZ9 1412 aa38.22■■■■□ 3.71
APBA3-208ENST00000592826 ADAMTS12P58397 1594 aa38.19■■■■□ 3.7
APBA3-208ENST00000592826 GRIN2AQ12879 1464 aa38.11■■■■□ 3.69
APBA3-208ENST00000592826 IGF1RP08069 1367 aa38.11■■■■□ 3.69
APBA3-208ENST00000592826 CUL7Q14999 1698 aa37.98■■■■□ 3.67
APBA3-208ENST00000592826 NUP160Q12769 1436 aa37.96■■■■□ 3.67
APBA3-208ENST00000592826 CARMIL1Q5VZK9 1371 aa37.9■■■■□ 3.66
APBA3-208ENST00000592826 CEP170Q5SW79 1584 aa37.85■■■■□ 3.65
APBA3-208ENST00000592826 RUSC2Q8N2Y8 1516 aa37.8■■■■□ 3.64
APBA3-208ENST00000592826 CHIC1Q5VXU3 224 aa37.74■■■■□ 3.63
Retrieved 100 of 20,778 RNA–protein pairs in 188.5 ms