RNA–Protein interactions for RNA: ENST00000592794.1

PKN1-214, Transcript of protein kinase N1, humanhuman

TSL 4

Gene PKN1, Length 322 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-214ENST00000592794 NISCHQ9Y2I1 1504 aa42.4■■■■■ 4.38
PKN1-214ENST00000592794 CCDC180Q9P1Z9 1646 aa37.96■■■■□ 3.67
PKN1-214ENST00000592794 ABCC9O60706 1549 aa37.44■■■■□ 3.58
PKN1-214ENST00000592794 RB1CC1Q8TDY2 1594 aa35.85■■■■□ 3.33
PKN1-214ENST00000592794 NACADO15069 1562 aa35.72■■■■□ 3.31
PKN1-214ENST00000592794 MYO15BQ96JP2 1530 aa35.4■■■■□ 3.26
PKN1-214ENST00000592794 DCAF8L2P0C7V8 631 aa35.3■■■■□ 3.24
PKN1-214ENST00000592794 ZCCHC6Q5VYS8 1495 aaKnown RBP35.27■■■■□ 3.24
PKN1-214ENST00000592794 UNC13AQ9UPW8 1703 aa35.2■■■■□ 3.23
PKN1-214ENST00000592794 DCAF1Q9Y4B6 1507 aa35.09■■■■□ 3.21
PKN1-214ENST00000592794 BICRAQ9NZM4 1560 aa34.9■■■■□ 3.18
PKN1-214ENST00000592794 PABPN1Q86U42 306 aaKnown RBP eCLIP34.83■■■■□ 3.17
PKN1-214ENST00000592794 DNAJC5BQ9UF47 199 aa34.77■■■■□ 3.16
PKN1-214ENST00000592794 SCRIBQ14160 1630 aa34.54■■■■□ 3.12
PKN1-214ENST00000592794 SHROOM4Q9ULL8 1493 aa34.42■■■■□ 3.1
PKN1-214ENST00000592794 EIF4G1Q04637 1599 aaKnown RBP33.95■■■■□ 3.03
PKN1-214ENST00000592794 CC2D2AQ9P2K1 1620 aa33.91■■■■□ 3.02
PKN1-214ENST00000592794 CECR2Q9BXF3 1484 aa33.69■■■□□ 2.98
PKN1-214ENST00000592794 SMARCA4P51532 1647 aa33.02■■■□□ 2.88
PKN1-214ENST00000592794 NCAPD3P42695 1498 aa32.95■■■□□ 2.87
PKN1-214ENST00000592794 ATAD2BQ9ULI0 1458 aa32.92■■■□□ 2.86
PKN1-214ENST00000592794 BAZ1AQ9NRL2 1556 aaPredicted RBP32.87■■■□□ 2.85
PKN1-214ENST00000592794 SMARCA2P51531 1590 aa32.83■■■□□ 2.85
PKN1-214ENST00000592794 HMGXB3Q12766 1538 aa32.8■■■□□ 2.84
PKN1-214ENST00000592794 PEG3Q9GZU2 1588 aa32.75■■■□□ 2.83
PKN1-214ENST00000592794 MROH2BQ7Z745 1585 aa32.68■■■□□ 2.82
PKN1-214ENST00000592794 BAZ1BQ9UIG0 1483 aaKnown RBP32.57■■■□□ 2.8
PKN1-214ENST00000592794 WIZO95785 1651 aa32.32■■■□□ 2.76
PKN1-214ENST00000592794 NESP48681 1621 aa32.32■■■□□ 2.76
PKN1-214ENST00000592794 ERCC6Q03468 1493 aa32.23■■■□□ 2.75
PKN1-214ENST00000592794 LAMC3Q9Y6N6 1575 aa32.17■■■□□ 2.74
PKN1-214ENST00000592794 CUX2O14529 1486 aa32.14■■■□□ 2.74
PKN1-214ENST00000592794 RSF1Q96T23 1441 aaPredicted RBP32.1■■■□□ 2.73
PKN1-214ENST00000592794 THOC2Q8NI27 1593 aaKnown RBP32.02■■■□□ 2.72
PKN1-214ENST00000592794 KIF21AQ7Z4S6 1674 aa31.99■■■□□ 2.71
PKN1-214ENST00000592794 TOP2AP11388 1531 aaKnown RBP31.94■■■□□ 2.7
PKN1-214ENST00000592794 CADPSQ9ULU8 1353 aa31.92■■■□□ 2.7
PKN1-214ENST00000592794 PDS5BQ9NTI5 1447 aa31.87■■■□□ 2.69
PKN1-214ENST00000592794 CFTRP13569 1480 aa31.7■■■□□ 2.66
PKN1-214ENST00000592794 MRC2Q9UBG0 1479 aa31.64■■■□□ 2.66
PKN1-214ENST00000592794 WDR62O43379 1518 aa31.62■■■□□ 2.65
PKN1-214ENST00000592794 DNAJC5Q9H3Z4 198 aa31.59■■■□□ 2.65
PKN1-214ENST00000592794 FANCD2Q9BXW9 1451 aa31.58■■■□□ 2.65
PKN1-214ENST00000592794 CEP164Q9UPV0 1460 aa31.58■■■□□ 2.65
PKN1-214ENST00000592794 PRDM2Q13029 1718 aa31.54■■■□□ 2.64
PKN1-214ENST00000592794 CCDC88BA6NC98 1476 aa31.52■■■□□ 2.64
PKN1-214ENST00000592794 URB2Q14146 1524 aaKnown RBP31.35■■■□□ 2.61
PKN1-214ENST00000592794 TOPBP1Q92547 1522 aa31.06■■■□□ 2.56
PKN1-214ENST00000592794 DNMBPQ6XZF7 1577 aa31■■■□□ 2.55
PKN1-214ENST00000592794 ABCC8Q09428 1581 aa30.95■■■□□ 2.54
PKN1-214ENST00000592794 IFT140Q96RY7 1462 aa30.93■■■□□ 2.54
PKN1-214ENST00000592794 ZNF608Q9ULD9 1512 aaPredicted RBP30.88■■■□□ 2.53
PKN1-214ENST00000592794 TARBP1Q13395 1621 aaKnown RBP30.81■■■□□ 2.52
PKN1-214ENST00000592794 EIF4G3O43432 1585 aaKnown RBP30.79■■■□□ 2.52
PKN1-214ENST00000592794 POLA1P09884 1462 aaPredicted RBP30.77■■■□□ 2.52
PKN1-214ENST00000592794 SUPT5HO00267 1087 aaKnown RBP30.77■■■□□ 2.52
PKN1-214ENST00000592794 CUX1P39880 1505 aa30.69■■■□□ 2.5
PKN1-214ENST00000592794 FGD5Q6ZNL6 1462 aa30.62■■■□□ 2.49
PKN1-214ENST00000592794 RAD54L2Q9Y4B4 1467 aa30.62■■■□□ 2.49
PKN1-214ENST00000592794 AQRO60306 1485 aaKnown RBP eCLIP30.58■■■□□ 2.49
PKN1-214ENST00000592794 OSCARQ8IYS5 282 aa30.58■■■□□ 2.49
PKN1-214ENST00000592794 SOGA1O94964 1423 aa30.54■■■□□ 2.48
PKN1-214ENST00000592794 WDR97A6NE52 1622 aa30.52■■■□□ 2.48
PKN1-214ENST00000592794 CHD1O14646 1710 aa30.5■■■□□ 2.47
PKN1-214ENST00000592794 TDRD9Q8NDG6 1382 aaKnown RBP30.42■■■□□ 2.46
PKN1-214ENST00000592794 BIVM-ERCC5R4GMW8 1640 aa30.35■■■□□ 2.45
PKN1-214ENST00000592794 RIMBP3CA6NJZ7 1639 aa30.34■■■□□ 2.45
PKN1-214ENST00000592794 RIMBP3BA6NNM3 1639 aa30.34■■■□□ 2.45
PKN1-214ENST00000592794 RIMBP3Q9UFD9 1639 aa30.34■■■□□ 2.45
PKN1-214ENST00000592794 SNAPC4Q5SXM2 1469 aa30.33■■■□□ 2.45
PKN1-214ENST00000592794 ABCA10Q8WWZ4 1543 aa30.31■■■□□ 2.44
PKN1-214ENST00000592794 PBRM1Q86U86 1689 aa30.3■■■□□ 2.44
PKN1-214ENST00000592794 TOP2BQ02880 1626 aa30.3■■■□□ 2.44
PKN1-214ENST00000592794 SYNJ1O43426 1573 aa30.3■■■□□ 2.44
PKN1-214ENST00000592794 ABCA5Q8WWZ7 1642 aa30.29■■■□□ 2.44
PKN1-214ENST00000592794 GRIN2BQ13224 1484 aa30.28■■■□□ 2.44
PKN1-214ENST00000592794 MAGI1Q96QZ7 1491 aaPredicted RBP30.27■■■□□ 2.44
PKN1-214ENST00000592794 TRIM41Q8WV44 630 aa30.27■■■□□ 2.44
PKN1-214ENST00000592794 ARHGEF11O15085 1522 aa30.27■■■□□ 2.44
PKN1-214ENST00000592794 WRNQ14191 1432 aaPredicted RBP eCLIP30.24■■■□□ 2.43
PKN1-214ENST00000592794 GAPVD1Q14C86 1478 aa30.22■■■□□ 2.43
PKN1-214ENST00000592794 CLASP1Q7Z460 1538 aa30.16■■■□□ 2.42
PKN1-214ENST00000592794 SYNJ2O15056 1496 aa30.15■■■□□ 2.42
PKN1-214ENST00000592794 FBLN2P98095 1184 aa30.14■■■□□ 2.42
PKN1-214ENST00000592794 CHMP7Q8WUX9 453 aaPredicted RBP30.03■■■□□ 2.4
PKN1-214ENST00000592794 ADAMTS12P58397 1594 aa30.03■■■□□ 2.4
PKN1-214ENST00000592794 ARAP1Q96P48 1450 aa30.01■■■□□ 2.4
PKN1-214ENST00000592794 ERICH3Q5RHP9 1530 aa29.93■■■□□ 2.38
PKN1-214ENST00000592794 GRIN2AQ12879 1464 aa29.93■■■□□ 2.38
PKN1-214ENST00000592794 CEP170Q5SW79 1584 aa29.86■■■□□ 2.37
PKN1-214ENST00000592794 FHAD1B1AJZ9 1412 aa29.85■■■□□ 2.37
PKN1-214ENST00000592794 NUP160Q12769 1436 aa29.84■■■□□ 2.37
PKN1-214ENST00000592794 CYB5RLQ6IPT4 315 aa29.83■■■□□ 2.37
PKN1-214ENST00000592794 SHROOM2Q13796 1616 aa29.72■■■□□ 2.35
PKN1-214ENST00000592794 ERCC6L2Q5T890 1561 aa29.7■■■□□ 2.35
PKN1-214ENST00000592794 KIF27Q86VH2 1401 aa29.62■■■□□ 2.33
PKN1-214ENST00000592794 RUSC2Q8N2Y8 1516 aa29.61■■■□□ 2.33
PKN1-214ENST00000592794 CUL7Q14999 1698 aa29.6■■■□□ 2.33
PKN1-214ENST00000592794 IGF1RP08069 1367 aa29.57■■■□□ 2.32
PKN1-214ENST00000592794 PRG4Q92954 1404 aaPredicted RBP29.42■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms