RNA–Protein interactions for RNA: ENST00000592783.5

GRN-220, Transcript of granulin precursor, humanhuman

TSL 4

Gene GRN, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-220ENST00000592783 NISCHQ9Y2I1 1504 aa36.28■■■■□ 3.4
GRN-220ENST00000592783 CCDC180Q9P1Z9 1646 aa32.1■■■□□ 2.73
GRN-220ENST00000592783 ABCC9O60706 1549 aa30.69■■■□□ 2.5
GRN-220ENST00000592783 ZCCHC6Q5VYS8 1495 aaKnown RBP30.36■■■□□ 2.45
GRN-220ENST00000592783 DCAF1Q9Y4B6 1507 aa30.08■■■□□ 2.41
GRN-220ENST00000592783 DCAF8L2P0C7V8 631 aa30.03■■■□□ 2.4
GRN-220ENST00000592783 MYO15BQ96JP2 1530 aa29.99■■■□□ 2.39
GRN-220ENST00000592783 NACADO15069 1562 aa29.98■■■□□ 2.39
GRN-220ENST00000592783 RB1CC1Q8TDY2 1594 aa29.89■■■□□ 2.38
GRN-220ENST00000592783 SCRIBQ14160 1630 aa29.27■■■□□ 2.28
GRN-220ENST00000592783 UNC13AQ9UPW8 1703 aa29.24■■■□□ 2.27
GRN-220ENST00000592783 SHROOM4Q9ULL8 1493 aa28.98■■■□□ 2.23
GRN-220ENST00000592783 BICRAQ9NZM4 1560 aa28.87■■■□□ 2.21
GRN-220ENST00000592783 PABPN1Q86U42 306 aaKnown RBP eCLIP28.72■■■□□ 2.19
GRN-220ENST00000592783 BAZ1AQ9NRL2 1556 aaPredicted RBP28.13■■■□□ 2.09
GRN-220ENST00000592783 CECR2Q9BXF3 1484 aa28.13■■■□□ 2.09
GRN-220ENST00000592783 EIF4G1Q04637 1599 aaKnown RBP28.09■■■□□ 2.09
GRN-220ENST00000592783 SMARCA4P51532 1647 aa28.07■■■□□ 2.08
GRN-220ENST00000592783 MROH2BQ7Z745 1585 aa27.94■■■□□ 2.06
GRN-220ENST00000592783 CC2D2AQ9P2K1 1620 aa27.83■■■□□ 2.05
GRN-220ENST00000592783 RSF1Q96T23 1441 aaPredicted RBP27.83■■■□□ 2.05
GRN-220ENST00000592783 SMARCA2P51531 1590 aa27.77■■■□□ 2.04
GRN-220ENST00000592783 DNAJC5BQ9UF47 199 aa27.77■■■□□ 2.04
GRN-220ENST00000592783 PEG3Q9GZU2 1588 aa27.77■■■□□ 2.04
GRN-220ENST00000592783 WIZO95785 1651 aa27.72■■■□□ 2.03
GRN-220ENST00000592783 ATAD2BQ9ULI0 1458 aa27.69■■■□□ 2.02
GRN-220ENST00000592783 SUPT5HO00267 1087 aaKnown RBP27.59■■■□□ 2.01
GRN-220ENST00000592783 NCAPD3P42695 1498 aa27.58■■■□□ 2.01
GRN-220ENST00000592783 HMGXB3Q12766 1538 aa27.58■■■□□ 2.01
GRN-220ENST00000592783 BAZ1BQ9UIG0 1483 aaKnown RBP27.56■■■□□ 2
GRN-220ENST00000592783 TOP2AP11388 1531 aaKnown RBP27.48■■□□□ 1.99
GRN-220ENST00000592783 CCDC88BA6NC98 1476 aa27.09■■□□□ 1.93
GRN-220ENST00000592783 LAMC3Q9Y6N6 1575 aa26.84■■□□□ 1.89
GRN-220ENST00000592783 PRDM2Q13029 1718 aa26.83■■□□□ 1.89
GRN-220ENST00000592783 CADPSQ9ULU8 1353 aa26.82■■□□□ 1.88
GRN-220ENST00000592783 CFTRP13569 1480 aa26.8■■□□□ 1.88
GRN-220ENST00000592783 NESP48681 1621 aa26.72■■□□□ 1.87
GRN-220ENST00000592783 PDS5BQ9NTI5 1447 aa26.61■■□□□ 1.85
GRN-220ENST00000592783 FANCD2Q9BXW9 1451 aa26.54■■□□□ 1.84
GRN-220ENST00000592783 KIF21AQ7Z4S6 1674 aa26.54■■□□□ 1.84
GRN-220ENST00000592783 ERCC6Q03468 1493 aa26.48■■□□□ 1.83
GRN-220ENST00000592783 CEP164Q9UPV0 1460 aa26.48■■□□□ 1.83
GRN-220ENST00000592783 ABCC8Q09428 1581 aa26.31■■□□□ 1.8
GRN-220ENST00000592783 MRC2Q9UBG0 1479 aa26.3■■□□□ 1.8
GRN-220ENST00000592783 WRNQ14191 1432 aaPredicted RBP eCLIP26.27■■□□□ 1.8
GRN-220ENST00000592783 DNMBPQ6XZF7 1577 aa26.25■■□□□ 1.79
GRN-220ENST00000592783 THOC2Q8NI27 1593 aaKnown RBP26.25■■□□□ 1.79
GRN-220ENST00000592783 URB2Q14146 1524 aaKnown RBP26.2■■□□□ 1.79
GRN-220ENST00000592783 BIVM-ERCC5R4GMW8 1640 aa26.2■■□□□ 1.78
GRN-220ENST00000592783 CUX1P39880 1505 aa26.19■■□□□ 1.78
GRN-220ENST00000592783 WDR62O43379 1518 aa26.19■■□□□ 1.78
GRN-220ENST00000592783 TOPBP1Q92547 1522 aa26.19■■□□□ 1.78
GRN-220ENST00000592783 TOP2BQ02880 1626 aa26.18■■□□□ 1.78
GRN-220ENST00000592783 SYNJ1O43426 1573 aa26.17■■□□□ 1.78
GRN-220ENST00000592783 CHIC1Q5VXU3 224 aa26.09■■□□□ 1.77
GRN-220ENST00000592783 TRIM41Q8WV44 630 aa26.06■■□□□ 1.76
GRN-220ENST00000592783 FGD5Q6ZNL6 1462 aa26.03■■□□□ 1.76
GRN-220ENST00000592783 POLA1P09884 1462 aaPredicted RBP25.98■■□□□ 1.75
GRN-220ENST00000592783 CUX2O14529 1486 aa25.97■■□□□ 1.75
GRN-220ENST00000592783 IFT140Q96RY7 1462 aa25.89■■□□□ 1.73
GRN-220ENST00000592783 SOGA1O94964 1423 aa25.88■■□□□ 1.73
GRN-220ENST00000592783 TARBP1Q13395 1621 aaKnown RBP25.86■■□□□ 1.73
GRN-220ENST00000592783 WDR97A6NE52 1622 aa25.85■■□□□ 1.73
GRN-220ENST00000592783 RAD54L2Q9Y4B4 1467 aa25.83■■□□□ 1.73
GRN-220ENST00000592783 ABCA10Q8WWZ4 1543 aa25.81■■□□□ 1.72
GRN-220ENST00000592783 KIF27Q86VH2 1401 aa25.69■■□□□ 1.7
GRN-220ENST00000592783 ABCA5Q8WWZ7 1642 aa25.68■■□□□ 1.7
GRN-220ENST00000592783 EIF4G3O43432 1585 aaKnown RBP25.66■■□□□ 1.7
GRN-220ENST00000592783 EEA1Q15075 1411 aa25.65■■□□□ 1.7
GRN-220ENST00000592783 ZNF608Q9ULD9 1512 aaPredicted RBP25.64■■□□□ 1.7
GRN-220ENST00000592783 TDRD9Q8NDG6 1382 aaKnown RBP25.63■■□□□ 1.69
GRN-220ENST00000592783 PBRM1Q86U86 1689 aa25.62■■□□□ 1.69
GRN-220ENST00000592783 GAPVD1Q14C86 1478 aa25.62■■□□□ 1.69
GRN-220ENST00000592783 AQRO60306 1485 aaKnown RBP eCLIP25.59■■□□□ 1.699e-10■■■■■ 33.9
GRN-220ENST00000592783 DNAJC5Q9H3Z4 198 aa25.58■■□□□ 1.69
GRN-220ENST00000592783 GRIN2BQ13224 1484 aa25.55■■□□□ 1.68
GRN-220ENST00000592783 ERICH3Q5RHP9 1530 aa25.54■■□□□ 1.68
GRN-220ENST00000592783 RUSC2Q8N2Y8 1516 aa25.54■■□□□ 1.68
GRN-220ENST00000592783 CUL7Q14999 1698 aa25.49■■□□□ 1.67
GRN-220ENST00000592783 FAM9AQ8IZU1 332 aaPredicted RBP25.47■■□□□ 1.67
GRN-220ENST00000592783 MAGI1Q96QZ7 1491 aaPredicted RBP25.44■■□□□ 1.66
GRN-220ENST00000592783 CSRNP3Q8WYN3 585 aa25.43■■□□□ 1.66
GRN-220ENST00000592783 IGF1RP08069 1367 aa25.43■■□□□ 1.66
GRN-220ENST00000592783 SNAPC4Q5SXM2 1469 aa25.4■■□□□ 1.66
GRN-220ENST00000592783 ADAMTS12P58397 1594 aa25.39■■□□□ 1.66
GRN-220ENST00000592783 FHAD1B1AJZ9 1412 aa25.35■■□□□ 1.65
GRN-220ENST00000592783 CARMIL1Q5VZK9 1371 aa25.34■■□□□ 1.65
GRN-220ENST00000592783 KIF21BO75037 1637 aa25.34■■□□□ 1.65
GRN-220ENST00000592783 SYNJ2O15056 1496 aa25.31■■□□□ 1.64
GRN-220ENST00000592783 PRXQ9BXM0 1461 aa25.31■■□□□ 1.64
GRN-220ENST00000592783 RAPGEF2Q9Y4G8 1499 aa25.29■■□□□ 1.64
GRN-220ENST00000592783 CHD1O14646 1710 aa25.27■■□□□ 1.64
GRN-220ENST00000592783 CHMP7Q8WUX9 453 aaPredicted RBP25.23■■□□□ 1.63
GRN-220ENST00000592783 GOLGA3Q08378 1498 aa25.21■■□□□ 1.63
GRN-220ENST00000592783 GRIN2AQ12879 1464 aa25.21■■□□□ 1.63
GRN-220ENST00000592783 FBLN2P98095 1184 aa25.19■■□□□ 1.62
GRN-220ENST00000592783 CTTNBP2Q8WZ74 1663 aa25.13■■□□□ 1.61
GRN-220ENST00000592783 EHMT2Q96KQ7 1210 aa25.07■■□□□ 1.6
GRN-220ENST00000592783 UBTFP17480 764 aaKnown RBP25.06■■□□□ 1.6
GRN-220ENST00000592783 CEP170Q5SW79 1584 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms