RNA–Protein interactions for RNA: ENST00000592510.1

NEK8-207, Transcript of NIMA related kinase 8, humanhuman

TSL 3

Gene NEK8, Length 782 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK8-207ENST00000592510 NISCHQ9Y2I1 1504 aa49.11■■■■■ 5.45
NEK8-207ENST00000592510 CCDC180Q9P1Z9 1646 aa43.67■■■■■ 4.58
NEK8-207ENST00000592510 ABCC9O60706 1549 aa42.87■■■■■ 4.45
NEK8-207ENST00000592510 DCAF8L2P0C7V8 631 aa41.23■■■■■ 4.19
NEK8-207ENST00000592510 RB1CC1Q8TDY2 1594 aa41.17■■■■■ 4.18
NEK8-207ENST00000592510 NACADO15069 1562 aa41.08■■■■■ 4.17
NEK8-207ENST00000592510 ZCCHC6Q5VYS8 1495 aaKnown RBP40.9■■■■■ 4.14
NEK8-207ENST00000592510 MYO15BQ96JP2 1530 aa40.76■■■■■ 4.12
NEK8-207ENST00000592510 DCAF1Q9Y4B6 1507 aa40.58■■■■■ 4.09
NEK8-207ENST00000592510 UNC13AQ9UPW8 1703 aa40.17■■■■■ 4.02
NEK8-207ENST00000592510 PABPN1Q86U42 306 aaKnown RBP eCLIP40.07■■■■■ 4.01
NEK8-207ENST00000592510 SCRIBQ14160 1630 aa39.92■■■■□ 3.98
NEK8-207ENST00000592510 BICRAQ9NZM4 1560 aa39.86■■■■□ 3.97
NEK8-207ENST00000592510 SHROOM4Q9ULL8 1493 aa39.44■■■■□ 3.9
NEK8-207ENST00000592510 DNAJC5BQ9UF47 199 aa39.44■■■■□ 3.9
NEK8-207ENST00000592510 EIF4G1Q04637 1599 aaKnown RBP38.87■■■■□ 3.81
NEK8-207ENST00000592510 CC2D2AQ9P2K1 1620 aa38.73■■■■□ 3.79
NEK8-207ENST00000592510 CECR2Q9BXF3 1484 aa38.51■■■■□ 3.76
NEK8-207ENST00000592510 SMARCA4P51532 1647 aa38.13■■■■□ 3.69
NEK8-207ENST00000592510 BAZ1AQ9NRL2 1556 aaPredicted RBP38.09■■■■□ 3.69
NEK8-207ENST00000592510 ATAD2BQ9ULI0 1458 aa37.93■■■■□ 3.66
NEK8-207ENST00000592510 SMARCA2P51531 1590 aa37.9■■■■□ 3.66
NEK8-207ENST00000592510 NCAPD3P42695 1498 aa37.89■■■■□ 3.66
NEK8-207ENST00000592510 MROH2BQ7Z745 1585 aa37.85■■■■□ 3.65
NEK8-207ENST00000592510 HMGXB3Q12766 1538 aa37.71■■■■□ 3.63
NEK8-207ENST00000592510 PEG3Q9GZU2 1588 aa37.7■■■■□ 3.63
NEK8-207ENST00000592510 BAZ1BQ9UIG0 1483 aaKnown RBP37.67■■■■□ 3.62
NEK8-207ENST00000592510 WIZO95785 1651 aa37.47■■■■□ 3.59
NEK8-207ENST00000592510 RSF1Q96T23 1441 aaPredicted RBP37.4■■■■□ 3.58
NEK8-207ENST00000592510 TOP2AP11388 1531 aaKnown RBP37.06■■■■□ 3.52
NEK8-207ENST00000592510 NESP48681 1621 aa37.05■■■■□ 3.52
NEK8-207ENST00000592510 ERCC6Q03468 1493 aa37■■■■□ 3.51
NEK8-207ENST00000592510 LAMC3Q9Y6N6 1575 aa36.93■■■■□ 3.5
NEK8-207ENST00000592510 CADPSQ9ULU8 1353 aa36.82■■■■□ 3.49
NEK8-207ENST00000592510 PDS5BQ9NTI5 1447 aa36.72■■■■□ 3.47
NEK8-207ENST00000592510 CCDC88BA6NC98 1476 aa36.62■■■■□ 3.45
NEK8-207ENST00000592510 CUX2O14529 1486 aa36.62■■■■□ 3.45
NEK8-207ENST00000592510 KIF21AQ7Z4S6 1674 aa36.61■■■■□ 3.45
NEK8-207ENST00000592510 CFTRP13569 1480 aa36.56■■■■□ 3.44
NEK8-207ENST00000592510 SUPT5HO00267 1087 aaKnown RBP36.56■■■■□ 3.44
NEK8-207ENST00000592510 THOC2Q8NI27 1593 aaKnown RBP36.47■■■■□ 3.43
NEK8-207ENST00000592510 FANCD2Q9BXW9 1451 aa36.43■■■■□ 3.42
NEK8-207ENST00000592510 CEP164Q9UPV0 1460 aa36.4■■■■□ 3.42
NEK8-207ENST00000592510 MRC2Q9UBG0 1479 aa36.34■■■■□ 3.41
NEK8-207ENST00000592510 PRDM2Q13029 1718 aa36.28■■■■□ 3.4
NEK8-207ENST00000592510 WDR62O43379 1518 aa36.18■■■■□ 3.38
NEK8-207ENST00000592510 URB2Q14146 1524 aaKnown RBP36.03■■■■□ 3.36
NEK8-207ENST00000592510 TOPBP1Q92547 1522 aa35.82■■■■□ 3.32
NEK8-207ENST00000592510 ABCC8Q09428 1581 aa35.81■■■■□ 3.32
NEK8-207ENST00000592510 DNMBPQ6XZF7 1577 aa35.78■■■■□ 3.32
NEK8-207ENST00000592510 DNAJC5Q9H3Z4 198 aa35.75■■■■□ 3.31
NEK8-207ENST00000592510 IFT140Q96RY7 1462 aa35.61■■■■□ 3.29
NEK8-207ENST00000592510 CUX1P39880 1505 aa35.52■■■■□ 3.28
NEK8-207ENST00000592510 POLA1P09884 1462 aaPredicted RBP35.51■■■■□ 3.28
NEK8-207ENST00000592510 ZNF608Q9ULD9 1512 aaPredicted RBP35.45■■■■□ 3.27
NEK8-207ENST00000592510 FGD5Q6ZNL6 1462 aa35.44■■■■□ 3.26
NEK8-207ENST00000592510 SOGA1O94964 1423 aa35.4■■■■□ 3.26
NEK8-207ENST00000592510 TARBP1Q13395 1621 aaKnown RBP35.39■■■■□ 3.26
NEK8-207ENST00000592510 RAD54L2Q9Y4B4 1467 aa35.39■■■■□ 3.26
NEK8-207ENST00000592510 EIF4G3O43432 1585 aaKnown RBP35.32■■■■□ 3.24
NEK8-207ENST00000592510 WRNQ14191 1432 aaPredicted RBP eCLIP35.32■■■■□ 3.24
NEK8-207ENST00000592510 AQRO60306 1485 aaKnown RBP eCLIP35.27■■■■□ 3.247e-7■■■□□ 15.5
NEK8-207ENST00000592510 TDRD9Q8NDG6 1382 aaKnown RBP35.21■■■■□ 3.23
NEK8-207ENST00000592510 TOP2BQ02880 1626 aa35.21■■■■□ 3.23
NEK8-207ENST00000592510 SYNJ1O43426 1573 aa35.2■■■■□ 3.23
NEK8-207ENST00000592510 BIVM-ERCC5R4GMW8 1640 aa35.19■■■■□ 3.22
NEK8-207ENST00000592510 WDR97A6NE52 1622 aa35.11■■■■□ 3.21
NEK8-207ENST00000592510 ABCA10Q8WWZ4 1543 aa35.06■■■■□ 3.2
NEK8-207ENST00000592510 OSCARQ8IYS5 282 aa35.05■■■■□ 3.2
NEK8-207ENST00000592510 GRIN2BQ13224 1484 aa34.97■■■■□ 3.19
NEK8-207ENST00000592510 GAPVD1Q14C86 1478 aa34.97■■■■□ 3.19
NEK8-207ENST00000592510 FBLN2P98095 1184 aa34.96■■■■□ 3.19
NEK8-207ENST00000592510 SNAPC4Q5SXM2 1469 aa34.95■■■■□ 3.19
NEK8-207ENST00000592510 ABCA5Q8WWZ7 1642 aa34.92■■■■□ 3.18
NEK8-207ENST00000592510 PBRM1Q86U86 1689 aa34.89■■■■□ 3.18
NEK8-207ENST00000592510 CHD1O14646 1710 aa34.88■■■■□ 3.17
NEK8-207ENST00000592510 MAGI1Q96QZ7 1491 aaPredicted RBP34.87■■■■□ 3.17
NEK8-207ENST00000592510 CHMP7Q8WUX9 453 aaPredicted RBP34.81■■■■□ 3.16
NEK8-207ENST00000592510 SYNJ2O15056 1496 aa34.75■■■■□ 3.15
NEK8-207ENST00000592510 ERICH3Q5RHP9 1530 aa34.65■■■■□ 3.14
NEK8-207ENST00000592510 ADAMTS12P58397 1594 aa34.61■■■■□ 3.13
NEK8-207ENST00000592510 KIF27Q86VH2 1401 aa34.59■■■■□ 3.13
NEK8-207ENST00000592510 FHAD1B1AJZ9 1412 aa34.56■■■■□ 3.12
NEK8-207ENST00000592510 TRIM41Q8WV44 630 aa34.52■■■■□ 3.12
NEK8-207ENST00000592510 GRIN2AQ12879 1464 aa34.52■■■■□ 3.12
NEK8-207ENST00000592510 RIMBP3CA6NJZ7 1639 aa34.49■■■■□ 3.11
NEK8-207ENST00000592510 RIMBP3BA6NNM3 1639 aa34.49■■■■□ 3.11
NEK8-207ENST00000592510 RIMBP3Q9UFD9 1639 aa34.49■■■■□ 3.11
NEK8-207ENST00000592510 ARHGEF11O15085 1522 aa34.47■■■■□ 3.11
NEK8-207ENST00000592510 CLASP1Q7Z460 1538 aa34.47■■■■□ 3.11
NEK8-207ENST00000592510 IGF1RP08069 1367 aa34.4■■■■□ 3.1
NEK8-207ENST00000592510 CEP170Q5SW79 1584 aa34.34■■■■□ 3.09
NEK8-207ENST00000592510 CUL7Q14999 1698 aa34.34■■■■□ 3.09
NEK8-207ENST00000592510 NUP160Q12769 1436 aa34.33■■■■□ 3.09
NEK8-207ENST00000592510 CARMIL1Q5VZK9 1371 aa34.24■■■■□ 3.07
NEK8-207ENST00000592510 RUSC2Q8N2Y8 1516 aa34.24■■■■□ 3.07
NEK8-207ENST00000592510 CYB5RLQ6IPT4 315 aa34.21■■■■□ 3.07
NEK8-207ENST00000592510 ARAP1Q96P48 1450 aa34.17■■■■□ 3.06
NEK8-207ENST00000592510 SHROOM2Q13796 1616 aa34.06■■■■□ 3.04
NEK8-207ENST00000592510 RAPGEF2Q9Y4G8 1499 aa34.03■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms