RNA–Protein interactions for RNA: ENST00000592484.5

LRP3-204, Transcript of LDL receptor related protein 3, humanhuman

TSL 4

Gene LRP3, Length 575 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-204ENST00000592484 NISCHQ9Y2I1 1504 aa39.7■■■■□ 3.95
LRP3-204ENST00000592484 CCDC180Q9P1Z9 1646 aa35.65■■■■□ 3.3
LRP3-204ENST00000592484 ABCC9O60706 1549 aa35.42■■■■□ 3.26
LRP3-204ENST00000592484 RB1CC1Q8TDY2 1594 aa33.85■■■■□ 3.01
LRP3-204ENST00000592484 NACADO15069 1562 aa33.65■■■□□ 2.98
LRP3-204ENST00000592484 DCAF8L2P0C7V8 631 aa33.35■■■□□ 2.93
LRP3-204ENST00000592484 MYO15BQ96JP2 1530 aa33.27■■■□□ 2.92
LRP3-204ENST00000592484 DNAJC5BQ9UF47 199 aa33.08■■■□□ 2.89
LRP3-204ENST00000592484 UNC13AQ9UPW8 1703 aa33.05■■■□□ 2.88
LRP3-204ENST00000592484 PABPN1Q86U42 306 aaKnown RBP eCLIP32.95■■■□□ 2.87
LRP3-204ENST00000592484 ZCCHC6Q5VYS8 1495 aaKnown RBP32.94■■■□□ 2.86
LRP3-204ENST00000592484 DCAF1Q9Y4B6 1507 aa32.87■■■□□ 2.85
LRP3-204ENST00000592484 BICRAQ9NZM4 1560 aa32.82■■■□□ 2.84
LRP3-204ENST00000592484 SHROOM4Q9ULL8 1493 aa32.5■■■□□ 2.79
LRP3-204ENST00000592484 SCRIBQ14160 1630 aa32.39■■■□□ 2.78
LRP3-204ENST00000592484 CC2D2AQ9P2K1 1620 aa32.04■■■□□ 2.72
LRP3-204ENST00000592484 EIF4G1Q04637 1599 aaKnown RBP32.02■■■□□ 2.72
LRP3-204ENST00000592484 CECR2Q9BXF3 1484 aa31.93■■■□□ 2.7
LRP3-204ENST00000592484 NCAPD3P42695 1498 aa31.05■■■□□ 2.56
LRP3-204ENST00000592484 SMARCA4P51532 1647 aa30.95■■■□□ 2.55
LRP3-204ENST00000592484 ATAD2BQ9ULI0 1458 aa30.95■■■□□ 2.54
LRP3-204ENST00000592484 SMARCA2P51531 1590 aa30.91■■■□□ 2.54
LRP3-204ENST00000592484 HMGXB3Q12766 1538 aa30.85■■■□□ 2.53
LRP3-204ENST00000592484 BAZ1AQ9NRL2 1556 aaPredicted RBP30.84■■■□□ 2.53
LRP3-204ENST00000592484 PEG3Q9GZU2 1588 aa30.7■■■□□ 2.5
LRP3-204ENST00000592484 BAZ1BQ9UIG0 1483 aaKnown RBP30.66■■■□□ 2.5
LRP3-204ENST00000592484 ERCC6Q03468 1493 aa30.61■■■□□ 2.49
LRP3-204ENST00000592484 CUX2O14529 1486 aa30.57■■■□□ 2.48
LRP3-204ENST00000592484 MROH2BQ7Z745 1585 aa30.56■■■□□ 2.48
LRP3-204ENST00000592484 NESP48681 1621 aa30.45■■■□□ 2.47
LRP3-204ENST00000592484 DNAJC5Q9H3Z4 198 aa30.37■■■□□ 2.45
LRP3-204ENST00000592484 LAMC3Q9Y6N6 1575 aa30.36■■■□□ 2.45
LRP3-204ENST00000592484 WIZO95785 1651 aa30.2■■■□□ 2.42
LRP3-204ENST00000592484 THOC2Q8NI27 1593 aaKnown RBP30.19■■■□□ 2.42
LRP3-204ENST00000592484 PDS5BQ9NTI5 1447 aa30.15■■■□□ 2.42
LRP3-204ENST00000592484 KIF21AQ7Z4S6 1674 aa30.11■■■□□ 2.41
LRP3-204ENST00000592484 CADPSQ9ULU8 1353 aa30.09■■■□□ 2.41
LRP3-204ENST00000592484 RSF1Q96T23 1441 aaPredicted RBP29.97■■■□□ 2.39
LRP3-204ENST00000592484 MRC2Q9UBG0 1479 aa29.87■■■□□ 2.37
LRP3-204ENST00000592484 TOP2AP11388 1531 aaKnown RBP29.86■■■□□ 2.37
LRP3-204ENST00000592484 WDR62O43379 1518 aa29.81■■■□□ 2.36
LRP3-204ENST00000592484 CFTRP13569 1480 aa29.79■■■□□ 2.36
LRP3-204ENST00000592484 CEP164Q9UPV0 1460 aa29.78■■■□□ 2.36
LRP3-204ENST00000592484 FANCD2Q9BXW9 1451 aa29.74■■■□□ 2.35
LRP3-204ENST00000592484 PRDM2Q13029 1718 aa29.54■■■□□ 2.32
LRP3-204ENST00000592484 CCDC88BA6NC98 1476 aa29.48■■■□□ 2.31
LRP3-204ENST00000592484 URB2Q14146 1524 aaKnown RBP29.47■■■□□ 2.31
LRP3-204ENST00000592484 ABCC8Q09428 1581 aa29.19■■■□□ 2.26
LRP3-204ENST00000592484 TOPBP1Q92547 1522 aa29.19■■■□□ 2.26
LRP3-204ENST00000592484 IFT140Q96RY7 1462 aa29.18■■■□□ 2.26
LRP3-204ENST00000592484 OSCARQ8IYS5 282 aa29.14■■■□□ 2.26
LRP3-204ENST00000592484 DNMBPQ6XZF7 1577 aa29.12■■■□□ 2.25
LRP3-204ENST00000592484 ZNF608Q9ULD9 1512 aaPredicted RBP29.07■■■□□ 2.24
LRP3-204ENST00000592484 TRIM41Q8WV44 630 aa29.02■■■□□ 2.24
LRP3-204ENST00000592484 EIF4G3O43432 1585 aaKnown RBP28.96■■■□□ 2.23
LRP3-204ENST00000592484 TARBP1Q13395 1621 aaKnown RBP28.94■■■□□ 2.22
LRP3-204ENST00000592484 POLA1P09884 1462 aaPredicted RBP28.9■■■□□ 2.22
LRP3-204ENST00000592484 AQRO60306 1485 aaKnown RBP eCLIP28.82■■■□□ 2.2
LRP3-204ENST00000592484 SOGA1O94964 1423 aa28.76■■■□□ 2.19
LRP3-204ENST00000592484 RIMBP3CA6NJZ7 1639 aa28.76■■■□□ 2.19
LRP3-204ENST00000592484 RIMBP3BA6NNM3 1639 aa28.76■■■□□ 2.19
LRP3-204ENST00000592484 RIMBP3Q9UFD9 1639 aa28.76■■■□□ 2.19
LRP3-204ENST00000592484 RAD54L2Q9Y4B4 1467 aa28.75■■■□□ 2.19
LRP3-204ENST00000592484 WDR97A6NE52 1622 aa28.73■■■□□ 2.19
LRP3-204ENST00000592484 FGD5Q6ZNL6 1462 aa28.72■■■□□ 2.19
LRP3-204ENST00000592484 CHD1O14646 1710 aa28.72■■■□□ 2.19
LRP3-204ENST00000592484 CUX1P39880 1505 aa28.72■■■□□ 2.19
LRP3-204ENST00000592484 ARHGEF11O15085 1522 aa28.69■■■□□ 2.18
LRP3-204ENST00000592484 TDRD9Q8NDG6 1382 aaKnown RBP28.65■■■□□ 2.18
LRP3-204ENST00000592484 SUPT5HO00267 1087 aaKnown RBP28.64■■■□□ 2.18
LRP3-204ENST00000592484 FBLN2P98095 1184 aa28.58■■■□□ 2.17
LRP3-204ENST00000592484 SNAPC4Q5SXM2 1469 aa28.56■■■□□ 2.16
LRP3-204ENST00000592484 MAGI1Q96QZ7 1491 aaPredicted RBP28.53■■■□□ 2.16
LRP3-204ENST00000592484 GRIN2BQ13224 1484 aa28.53■■■□□ 2.16
LRP3-204ENST00000592484 ABCA10Q8WWZ4 1543 aa28.43■■■□□ 2.14
LRP3-204ENST00000592484 GAPVD1Q14C86 1478 aa28.43■■■□□ 2.14
LRP3-204ENST00000592484 CHMP7Q8WUX9 453 aaPredicted RBP28.43■■■□□ 2.14
LRP3-204ENST00000592484 PBRM1Q86U86 1689 aa28.42■■■□□ 2.14
LRP3-204ENST00000592484 SYNJ1O43426 1573 aa28.42■■■□□ 2.14
LRP3-204ENST00000592484 SYNJ2O15056 1496 aa28.42■■■□□ 2.14
LRP3-204ENST00000592484 CYB5RLQ6IPT4 315 aa28.41■■■□□ 2.14
LRP3-204ENST00000592484 CLASP1Q7Z460 1538 aa28.41■■■□□ 2.14
LRP3-204ENST00000592484 ARAP1Q96P48 1450 aa28.4■■■□□ 2.14
LRP3-204ENST00000592484 ABCA5Q8WWZ7 1642 aa28.39■■■□□ 2.13
LRP3-204ENST00000592484 WRNQ14191 1432 aaPredicted RBP eCLIP28.34■■■□□ 2.13
LRP3-204ENST00000592484 BIVM-ERCC5R4GMW8 1640 aa28.33■■■□□ 2.13
LRP3-204ENST00000592484 TOP2BQ02880 1626 aa28.32■■■□□ 2.12
LRP3-204ENST00000592484 ADAMTS12P58397 1594 aa28.16■■■□□ 2.1
LRP3-204ENST00000592484 GRIN2AQ12879 1464 aa28.15■■■□□ 2.1
LRP3-204ENST00000592484 ERICH3Q5RHP9 1530 aa28.1■■■□□ 2.09
LRP3-204ENST00000592484 FHAD1B1AJZ9 1412 aa28.08■■■□□ 2.09
LRP3-204ENST00000592484 NUP160Q12769 1436 aa28.07■■■□□ 2.08
LRP3-204ENST00000592484 TRHP20396 242 aaPredicted RBP28.05■■■□□ 2.08
LRP3-204ENST00000592484 CEP170Q5SW79 1584 aa28.03■■■□□ 2.08
LRP3-204ENST00000592484 SHROOM2Q13796 1616 aa27.94■■■□□ 2.06
LRP3-204ENST00000592484 ERCC6L2Q5T890 1561 aa27.91■■■□□ 2.06
LRP3-204ENST00000592484 RUSC2Q8N2Y8 1516 aa27.77■■■□□ 2.04
LRP3-204ENST00000592484 KIF27Q86VH2 1401 aa27.76■■■□□ 2.04
LRP3-204ENST00000592484 PRG4Q92954 1404 aaPredicted RBP27.75■■■□□ 2.03
LRP3-204ENST00000592484 JPH4Q96JJ6 628 aa27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms