RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 NISCHQ9Y2I1 1504 aa50.04■■■■■ 5.6
CIRBP-239ENST00000592467 CCDC180Q9P1Z9 1646 aa44.68■■■■■ 4.74
CIRBP-239ENST00000592467 ABCC9O60706 1549 aa44.02■■■■■ 4.64
CIRBP-239ENST00000592467 RB1CC1Q8TDY2 1594 aa42.18■■■■■ 4.34
CIRBP-239ENST00000592467 NACADO15069 1562 aa42.05■■■■■ 4.32
CIRBP-239ENST00000592467 DCAF8L2P0C7V8 631 aa41.75■■■■■ 4.27
CIRBP-239ENST00000592467 MYO15BQ96JP2 1530 aa41.72■■■■■ 4.27
CIRBP-239ENST00000592467 ZCCHC6Q5VYS8 1495 aaKnown RBP41.61■■■■■ 4.25
CIRBP-239ENST00000592467 DCAF1Q9Y4B6 1507 aa41.4■■■■■ 4.22
CIRBP-239ENST00000592467 UNC13AQ9UPW8 1703 aa41.37■■■■■ 4.21
CIRBP-239ENST00000592467 BICRAQ9NZM4 1560 aa41.05■■■■■ 4.16
CIRBP-239ENST00000592467 PABPN1Q86U42 306 aaKnown RBP eCLIP41.04■■■■■ 4.16
CIRBP-239ENST00000592467 DNAJC5BQ9UF47 199 aa40.86■■■■■ 4.13
CIRBP-239ENST00000592467 SCRIBQ14160 1630 aa40.69■■■■■ 4.1
CIRBP-239ENST00000592467 SHROOM4Q9ULL8 1493 aa40.47■■■■■ 4.07
CIRBP-239ENST00000592467 EIF4G1Q04637 1599 aaKnown RBP39.92■■■■□ 3.98
CIRBP-239ENST00000592467 CC2D2AQ9P2K1 1620 aa39.86■■■■□ 3.97
CIRBP-239ENST00000592467 CECR2Q9BXF3 1484 aa39.59■■■■□ 3.93
CIRBP-239ENST00000592467 SMARCA4P51532 1647 aa38.92■■■■□ 3.82
CIRBP-239ENST00000592467 NCAPD3P42695 1498 aa38.83■■■■□ 3.81
CIRBP-239ENST00000592467 ATAD2BQ9ULI0 1458 aa38.79■■■■□ 3.8
CIRBP-239ENST00000592467 BAZ1AQ9NRL2 1556 aaPredicted RBP38.77■■■■□ 3.8
CIRBP-239ENST00000592467 SMARCA2P51531 1590 aa38.68■■■■□ 3.78
CIRBP-239ENST00000592467 HMGXB3Q12766 1538 aa38.6■■■■□ 3.77
CIRBP-239ENST00000592467 MROH2BQ7Z745 1585 aa38.58■■■■□ 3.77
CIRBP-239ENST00000592467 PEG3Q9GZU2 1588 aa38.58■■■■□ 3.77
CIRBP-239ENST00000592467 BAZ1BQ9UIG0 1483 aaKnown RBP38.39■■■■□ 3.74
CIRBP-239ENST00000592467 WIZO95785 1651 aa38.15■■■■□ 3.7
CIRBP-239ENST00000592467 NESP48681 1621 aa38.04■■■■□ 3.68
CIRBP-239ENST00000592467 RSF1Q96T23 1441 aaPredicted RBP37.97■■■■□ 3.67
CIRBP-239ENST00000592467 ERCC6Q03468 1493 aa37.89■■■■□ 3.66
CIRBP-239ENST00000592467 LAMC3Q9Y6N6 1575 aa37.85■■■■□ 3.65
CIRBP-239ENST00000592467 CUX2O14529 1486 aa37.71■■■■□ 3.63
CIRBP-239ENST00000592467 TOP2AP11388 1531 aaKnown RBP37.68■■■■□ 3.62
CIRBP-239ENST00000592467 CADPSQ9ULU8 1353 aa37.64■■■■□ 3.62
CIRBP-239ENST00000592467 KIF21AQ7Z4S6 1674 aa37.6■■■■□ 3.61
CIRBP-239ENST00000592467 THOC2Q8NI27 1593 aaKnown RBP37.58■■■■□ 3.61
CIRBP-239ENST00000592467 PDS5BQ9NTI5 1447 aa37.54■■■■□ 3.6
CIRBP-239ENST00000592467 CFTRP13569 1480 aa37.37■■■■□ 3.57
CIRBP-239ENST00000592467 CCDC88BA6NC98 1476 aa37.25■■■■□ 3.55
CIRBP-239ENST00000592467 MRC2Q9UBG0 1479 aa37.22■■■■□ 3.55
CIRBP-239ENST00000592467 FANCD2Q9BXW9 1451 aa37.2■■■■□ 3.55
CIRBP-239ENST00000592467 WDR62O43379 1518 aa37.17■■■■□ 3.54
CIRBP-239ENST00000592467 CEP164Q9UPV0 1460 aa37.17■■■■□ 3.54
CIRBP-239ENST00000592467 PRDM2Q13029 1718 aa37.1■■■■□ 3.53
CIRBP-239ENST00000592467 DNAJC5Q9H3Z4 198 aa37.02■■■■□ 3.52
CIRBP-239ENST00000592467 URB2Q14146 1524 aaKnown RBP36.92■■■■□ 3.5
CIRBP-239ENST00000592467 TOPBP1Q92547 1522 aa36.59■■■■□ 3.45
CIRBP-239ENST00000592467 SUPT5HO00267 1087 aaKnown RBP36.56■■■■□ 3.44
CIRBP-239ENST00000592467 DNMBPQ6XZF7 1577 aa36.52■■■■□ 3.44
CIRBP-239ENST00000592467 ABCC8Q09428 1581 aa36.5■■■■□ 3.43
CIRBP-239ENST00000592467 IFT140Q96RY7 1462 aa36.43■■■■□ 3.42
CIRBP-239ENST00000592467 ZNF608Q9ULD9 1512 aaPredicted RBP36.36■■■■□ 3.41
CIRBP-239ENST00000592467 TARBP1Q13395 1621 aaKnown RBP36.29■■■■□ 3.4
CIRBP-239ENST00000592467 POLA1P09884 1462 aaPredicted RBP36.26■■■■□ 3.4
CIRBP-239ENST00000592467 CUX1P39880 1505 aa36.21■■■■□ 3.39
CIRBP-239ENST00000592467 EIF4G3O43432 1585 aaKnown RBP36.19■■■■□ 3.38
CIRBP-239ENST00000592467 FGD5Q6ZNL6 1462 aa36.11■■■■□ 3.37
CIRBP-239ENST00000592467 RAD54L2Q9Y4B4 1467 aa36.11■■■■□ 3.37
CIRBP-239ENST00000592467 AQRO60306 1485 aaKnown RBP eCLIP36.06■■■■□ 3.36
CIRBP-239ENST00000592467 SOGA1O94964 1423 aa36.05■■■■□ 3.36
CIRBP-239ENST00000592467 OSCARQ8IYS5 282 aa36.01■■■■□ 3.36
CIRBP-239ENST00000592467 WDR97A6NE52 1622 aa35.92■■■■□ 3.34
CIRBP-239ENST00000592467 TDRD9Q8NDG6 1382 aaKnown RBP35.9■■■■□ 3.34
CIRBP-239ENST00000592467 CHD1O14646 1710 aa35.83■■■■□ 3.33
CIRBP-239ENST00000592467 BIVM-ERCC5R4GMW8 1640 aa35.81■■■■□ 3.32
CIRBP-239ENST00000592467 TOP2BQ02880 1626 aa35.78■■■■□ 3.32
CIRBP-239ENST00000592467 SYNJ1O43426 1573 aa35.77■■■■□ 3.32
CIRBP-239ENST00000592467 WRNQ14191 1432 aaPredicted RBP eCLIP35.75■■■■□ 3.31
CIRBP-239ENST00000592467 ABCA10Q8WWZ4 1543 aa35.75■■■■□ 3.31
CIRBP-239ENST00000592467 SNAPC4Q5SXM2 1469 aa35.72■■■■□ 3.31
CIRBP-239ENST00000592467 ABCA5Q8WWZ7 1642 aa35.68■■■■□ 3.3
CIRBP-239ENST00000592467 GRIN2BQ13224 1484 aa35.68■■■■□ 3.3
CIRBP-239ENST00000592467 PBRM1Q86U86 1689 aa35.66■■■■□ 3.3
CIRBP-239ENST00000592467 MAGI1Q96QZ7 1491 aaPredicted RBP35.65■■■■□ 3.3
CIRBP-239ENST00000592467 GAPVD1Q14C86 1478 aa35.64■■■■□ 3.3
CIRBP-239ENST00000592467 RIMBP3CA6NJZ7 1639 aa35.6■■■■□ 3.29
CIRBP-239ENST00000592467 RIMBP3BA6NNM3 1639 aa35.6■■■■□ 3.29
CIRBP-239ENST00000592467 RIMBP3Q9UFD9 1639 aa35.6■■■■□ 3.29
CIRBP-239ENST00000592467 FBLN2P98095 1184 aa35.56■■■■□ 3.28
CIRBP-239ENST00000592467 ARHGEF11O15085 1522 aa35.52■■■■□ 3.28
CIRBP-239ENST00000592467 TRIM41Q8WV44 630 aa35.52■■■■□ 3.28
CIRBP-239ENST00000592467 SYNJ2O15056 1496 aa35.51■■■■□ 3.28
CIRBP-239ENST00000592467 CLASP1Q7Z460 1538 aa35.45■■■■□ 3.27
CIRBP-239ENST00000592467 CHMP7Q8WUX9 453 aaPredicted RBP35.43■■■■□ 3.26
CIRBP-239ENST00000592467 ADAMTS12P58397 1594 aa35.35■■■■□ 3.25
CIRBP-239ENST00000592467 ERICH3Q5RHP9 1530 aa35.3■■■■□ 3.24
CIRBP-239ENST00000592467 GRIN2AQ12879 1464 aa35.25■■■■□ 3.23
CIRBP-239ENST00000592467 ARAP1Q96P48 1450 aa35.23■■■■□ 3.23
CIRBP-239ENST00000592467 FHAD1B1AJZ9 1412 aa35.22■■■■□ 3.23
CIRBP-239ENST00000592467 CEP170Q5SW79 1584 aa35.15■■■■□ 3.22
CIRBP-239ENST00000592467 NUP160Q12769 1436 aa35.15■■■■□ 3.22
CIRBP-239ENST00000592467 CYB5RLQ6IPT4 315 aa35.12■■■■□ 3.21
CIRBP-239ENST00000592467 KIF27Q86VH2 1401 aa35■■■■□ 3.19
CIRBP-239ENST00000592467 IGF1RP08069 1367 aa34.98■■■■□ 3.19
CIRBP-239ENST00000592467 SHROOM2Q13796 1616 aa34.97■■■■□ 3.19
CIRBP-239ENST00000592467 ERCC6L2Q5T890 1561 aa34.95■■■■□ 3.18
CIRBP-239ENST00000592467 CUL7Q14999 1698 aa34.9■■■■□ 3.18
CIRBP-239ENST00000592467 RUSC2Q8N2Y8 1516 aa34.85■■■■□ 3.17
CIRBP-239ENST00000592467 CARMIL1Q5VZK9 1371 aa34.71■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms