RNA–Protein interactions for RNA: ENST00000592338.5

CNN1-209, Transcript of calponin 1, humanhuman

TSL 5

Gene CNN1, Length 525 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-209ENST00000592338 NISCHQ9Y2I1 1504 aa39.8■■■■□ 3.96
CNN1-209ENST00000592338 CCDC180Q9P1Z9 1646 aa35.59■■■■□ 3.29
CNN1-209ENST00000592338 ABCC9O60706 1549 aa34.98■■■■□ 3.19
CNN1-209ENST00000592338 RB1CC1Q8TDY2 1594 aa33.54■■■□□ 2.96
CNN1-209ENST00000592338 NACADO15069 1562 aa33.41■■■□□ 2.94
CNN1-209ENST00000592338 DCAF8L2P0C7V8 631 aa33.26■■■□□ 2.91
CNN1-209ENST00000592338 ZCCHC6Q5VYS8 1495 aaKnown RBP33.12■■■□□ 2.89
CNN1-209ENST00000592338 MYO15BQ96JP2 1530 aa33.07■■■□□ 2.89
CNN1-209ENST00000592338 UNC13AQ9UPW8 1703 aa33.02■■■□□ 2.88
CNN1-209ENST00000592338 DCAF1Q9Y4B6 1507 aa32.87■■■□□ 2.85
CNN1-209ENST00000592338 BICRAQ9NZM4 1560 aa32.6■■■□□ 2.81
CNN1-209ENST00000592338 PABPN1Q86U42 306 aaKnown RBP eCLIP32.58■■■□□ 2.81
CNN1-209ENST00000592338 SCRIBQ14160 1630 aa32.48■■■□□ 2.79
CNN1-209ENST00000592338 DNAJC5BQ9UF47 199 aa32.26■■■□□ 2.75
CNN1-209ENST00000592338 SHROOM4Q9ULL8 1493 aa32.09■■■□□ 2.73
CNN1-209ENST00000592338 EIF4G1Q04637 1599 aaKnown RBP31.72■■■□□ 2.67
CNN1-209ENST00000592338 CC2D2AQ9P2K1 1620 aa31.67■■■□□ 2.66
CNN1-209ENST00000592338 CECR2Q9BXF3 1484 aa31.41■■■□□ 2.62
CNN1-209ENST00000592338 SMARCA4P51532 1647 aa31.01■■■□□ 2.55
CNN1-209ENST00000592338 BAZ1AQ9NRL2 1556 aaPredicted RBP30.87■■■□□ 2.53
CNN1-209ENST00000592338 ATAD2BQ9ULI0 1458 aa30.81■■■□□ 2.52
CNN1-209ENST00000592338 NCAPD3P42695 1498 aa30.77■■■□□ 2.52
CNN1-209ENST00000592338 SMARCA2P51531 1590 aa30.76■■■□□ 2.52
CNN1-209ENST00000592338 MROH2BQ7Z745 1585 aa30.71■■■□□ 2.51
CNN1-209ENST00000592338 HMGXB3Q12766 1538 aa30.68■■■□□ 2.5
CNN1-209ENST00000592338 PEG3Q9GZU2 1588 aa30.65■■■□□ 2.5
CNN1-209ENST00000592338 BAZ1BQ9UIG0 1483 aaKnown RBP30.56■■■□□ 2.48
CNN1-209ENST00000592338 WIZO95785 1651 aa30.46■■■□□ 2.47
CNN1-209ENST00000592338 NESP48681 1621 aa30.23■■■□□ 2.43
CNN1-209ENST00000592338 RSF1Q96T23 1441 aaPredicted RBP30.21■■■□□ 2.43
CNN1-209ENST00000592338 ERCC6Q03468 1493 aa30.12■■■□□ 2.41
CNN1-209ENST00000592338 LAMC3Q9Y6N6 1575 aa30.08■■■□□ 2.41
CNN1-209ENST00000592338 TOP2AP11388 1531 aaKnown RBP30.03■■■□□ 2.4
CNN1-209ENST00000592338 KIF21AQ7Z4S6 1674 aa29.99■■■□□ 2.39
CNN1-209ENST00000592338 THOC2Q8NI27 1593 aaKnown RBP29.88■■■□□ 2.37
CNN1-209ENST00000592338 CUX2O14529 1486 aa29.87■■■□□ 2.37
CNN1-209ENST00000592338 CADPSQ9ULU8 1353 aa29.86■■■□□ 2.37
CNN1-209ENST00000592338 PDS5BQ9NTI5 1447 aa29.79■■■□□ 2.36
CNN1-209ENST00000592338 PRDM2Q13029 1718 aa29.68■■■□□ 2.34
CNN1-209ENST00000592338 CFTRP13569 1480 aa29.66■■■□□ 2.34
CNN1-209ENST00000592338 CCDC88BA6NC98 1476 aa29.64■■■□□ 2.34
CNN1-209ENST00000592338 FANCD2Q9BXW9 1451 aa29.58■■■□□ 2.33
CNN1-209ENST00000592338 MRC2Q9UBG0 1479 aa29.57■■■□□ 2.32
CNN1-209ENST00000592338 CEP164Q9UPV0 1460 aa29.57■■■□□ 2.32
CNN1-209ENST00000592338 WDR62O43379 1518 aa29.52■■■□□ 2.32
CNN1-209ENST00000592338 URB2Q14146 1524 aaKnown RBP29.35■■■□□ 2.29
CNN1-209ENST00000592338 SUPT5HO00267 1087 aaKnown RBP29.25■■■□□ 2.27
CNN1-209ENST00000592338 DNAJC5Q9H3Z4 198 aa29.15■■■□□ 2.26
CNN1-209ENST00000592338 TOPBP1Q92547 1522 aa29.11■■■□□ 2.25
CNN1-209ENST00000592338 DNMBPQ6XZF7 1577 aa29.08■■■□□ 2.25
CNN1-209ENST00000592338 ABCC8Q09428 1581 aa29■■■□□ 2.23
CNN1-209ENST00000592338 IFT140Q96RY7 1462 aa28.92■■■□□ 2.22
CNN1-209ENST00000592338 ZNF608Q9ULD9 1512 aaPredicted RBP28.89■■■□□ 2.21
CNN1-209ENST00000592338 TARBP1Q13395 1621 aaKnown RBP28.87■■■□□ 2.21
CNN1-209ENST00000592338 POLA1P09884 1462 aaPredicted RBP28.84■■■□□ 2.21
CNN1-209ENST00000592338 CUX1P39880 1505 aa28.84■■■□□ 2.21
CNN1-209ENST00000592338 EIF4G3O43432 1585 aaKnown RBP28.84■■■□□ 2.21
CNN1-209ENST00000592338 FGD5Q6ZNL6 1462 aa28.75■■■□□ 2.19
CNN1-209ENST00000592338 RAD54L2Q9Y4B4 1467 aa28.73■■■□□ 2.19
CNN1-209ENST00000592338 WDR97A6NE52 1622 aa28.66■■■□□ 2.18
CNN1-209ENST00000592338 AQRO60306 1485 aaKnown RBP eCLIP28.66■■■□□ 2.18
CNN1-209ENST00000592338 SOGA1O94964 1423 aa28.65■■■□□ 2.18
CNN1-209ENST00000592338 CHD1O14646 1710 aa28.6■■■□□ 2.17
CNN1-209ENST00000592338 BIVM-ERCC5R4GMW8 1640 aa28.58■■■□□ 2.17
CNN1-209ENST00000592338 SYNJ1O43426 1573 aa28.55■■■□□ 2.16
CNN1-209ENST00000592338 TDRD9Q8NDG6 1382 aaKnown RBP28.54■■■□□ 2.16
CNN1-209ENST00000592338 TOP2BQ02880 1626 aa28.53■■■□□ 2.16
CNN1-209ENST00000592338 PBRM1Q86U86 1689 aa28.51■■■□□ 2.15
CNN1-209ENST00000592338 OSCARQ8IYS5 282 aa28.5■■■□□ 2.15
CNN1-209ENST00000592338 WRNQ14191 1432 aaPredicted RBP eCLIP28.48■■■□□ 2.15
CNN1-209ENST00000592338 ABCA5Q8WWZ7 1642 aa28.43■■■□□ 2.14
CNN1-209ENST00000592338 ABCA10Q8WWZ4 1543 aa28.43■■■□□ 2.14
CNN1-209ENST00000592338 SNAPC4Q5SXM2 1469 aa28.42■■■□□ 2.14
CNN1-209ENST00000592338 GRIN2BQ13224 1484 aa28.36■■■□□ 2.13
CNN1-209ENST00000592338 GAPVD1Q14C86 1478 aa28.34■■■□□ 2.13
CNN1-209ENST00000592338 MAGI1Q96QZ7 1491 aaPredicted RBP28.32■■■□□ 2.12
CNN1-209ENST00000592338 FBLN2P98095 1184 aa28.3■■■□□ 2.12
CNN1-209ENST00000592338 RIMBP3CA6NJZ7 1639 aa28.29■■■□□ 2.12
CNN1-209ENST00000592338 RIMBP3BA6NNM3 1639 aa28.29■■■□□ 2.12
CNN1-209ENST00000592338 RIMBP3Q9UFD9 1639 aa28.29■■■□□ 2.12
CNN1-209ENST00000592338 SYNJ2O15056 1496 aa28.21■■■□□ 2.11
CNN1-209ENST00000592338 ARHGEF11O15085 1522 aa28.19■■■□□ 2.1
CNN1-209ENST00000592338 ADAMTS12P58397 1594 aa28.17■■■□□ 2.1
CNN1-209ENST00000592338 TRIM41Q8WV44 630 aa28.17■■■□□ 2.1
CNN1-209ENST00000592338 CLASP1Q7Z460 1538 aa28.16■■■□□ 2.1
CNN1-209ENST00000592338 CHMP7Q8WUX9 453 aaPredicted RBP28.14■■■□□ 2.1
CNN1-209ENST00000592338 ERICH3Q5RHP9 1530 aa28.08■■■□□ 2.09
CNN1-209ENST00000592338 GRIN2AQ12879 1464 aa28.03■■■□□ 2.08
CNN1-209ENST00000592338 FHAD1B1AJZ9 1412 aa27.98■■■□□ 2.07
CNN1-209ENST00000592338 CEP170Q5SW79 1584 aa27.98■■■□□ 2.07
CNN1-209ENST00000592338 ARAP1Q96P48 1450 aa27.95■■■□□ 2.07
CNN1-209ENST00000592338 NUP160Q12769 1436 aa27.89■■■□□ 2.06
CNN1-209ENST00000592338 KIF27Q86VH2 1401 aa27.87■■■□□ 2.05
CNN1-209ENST00000592338 CUL7Q14999 1698 aa27.86■■■□□ 2.05
CNN1-209ENST00000592338 CYB5RLQ6IPT4 315 aa27.83■■■□□ 2.05
CNN1-209ENST00000592338 SHROOM2Q13796 1616 aa27.81■■■□□ 2.04
CNN1-209ENST00000592338 ERCC6L2Q5T890 1561 aa27.8■■■□□ 2.04
CNN1-209ENST00000592338 IGF1RP08069 1367 aa27.77■■■□□ 2.04
CNN1-209ENST00000592338 RUSC2Q8N2Y8 1516 aa27.77■■■□□ 2.04
CNN1-209ENST00000592338 CARMIL1Q5VZK9 1371 aa27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms