RNA–Protein interactions for RNA: ENST00000592337.1

RFX2-220, Transcript of regulatory factor X2, humanhuman

TSL 4

Gene RFX2, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX2-220ENST00000592337 NISCHQ9Y2I1 1504 aa25.63■■□□□ 1.69
RFX2-220ENST00000592337 CCDC180Q9P1Z9 1646 aa22.85■■□□□ 1.25
RFX2-220ENST00000592337 ABCC9O60706 1549 aa22.49■■□□□ 1.19
RFX2-220ENST00000592337 DCAF8L2P0C7V8 631 aa21.58■■□□□ 1.05
RFX2-220ENST00000592337 RB1CC1Q8TDY2 1594 aa21.52■■□□□ 1.04
RFX2-220ENST00000592337 NACADO15069 1562 aa21.43■■□□□ 1.02
RFX2-220ENST00000592337 ZCCHC6Q5VYS8 1495 aaKnown RBP21.32■■□□□ 1
RFX2-220ENST00000592337 UNC13AQ9UPW8 1703 aa21.26■□□□□ 0.99
RFX2-220ENST00000592337 MYO15BQ96JP2 1530 aa21.15■□□□□ 0.98
RFX2-220ENST00000592337 DCAF1Q9Y4B6 1507 aa21.09■□□□□ 0.97
RFX2-220ENST00000592337 PABPN1Q86U42 306 aaKnown RBP eCLIP21■□□□□ 0.95
RFX2-220ENST00000592337 SCRIBQ14160 1630 aa20.96■□□□□ 0.95
RFX2-220ENST00000592337 BICRAQ9NZM4 1560 aa20.92■□□□□ 0.94
RFX2-220ENST00000592337 DNAJC5BQ9UF47 199 aa20.67■□□□□ 0.9
RFX2-220ENST00000592337 SHROOM4Q9ULL8 1493 aa20.46■□□□□ 0.87
RFX2-220ENST00000592337 EIF4G1Q04637 1599 aaKnown RBP20.34■□□□□ 0.85
RFX2-220ENST00000592337 CC2D2AQ9P2K1 1620 aa20.33■□□□□ 0.84
RFX2-220ENST00000592337 CECR2Q9BXF3 1484 aa20.14■□□□□ 0.81
RFX2-220ENST00000592337 SMARCA4P51532 1647 aa19.96■□□□□ 0.79
RFX2-220ENST00000592337 BAZ1AQ9NRL2 1556 aaPredicted RBP19.86■□□□□ 0.77
RFX2-220ENST00000592337 MROH2BQ7Z745 1585 aa19.82■□□□□ 0.76
RFX2-220ENST00000592337 ATAD2BQ9ULI0 1458 aa19.79■□□□□ 0.76
RFX2-220ENST00000592337 SMARCA2P51531 1590 aa19.76■□□□□ 0.75
RFX2-220ENST00000592337 NCAPD3P42695 1498 aa19.73■□□□□ 0.75
RFX2-220ENST00000592337 WIZO95785 1651 aa19.69■□□□□ 0.74
RFX2-220ENST00000592337 HMGXB3Q12766 1538 aa19.66■□□□□ 0.74
RFX2-220ENST00000592337 BAZ1BQ9UIG0 1483 aaKnown RBP19.66■□□□□ 0.74
RFX2-220ENST00000592337 PEG3Q9GZU2 1588 aa19.66■□□□□ 0.74
RFX2-220ENST00000592337 RSF1Q96T23 1441 aaPredicted RBP19.5■□□□□ 0.71
RFX2-220ENST00000592337 NESP48681 1621 aa19.46■□□□□ 0.71
RFX2-220ENST00000592337 TOP2AP11388 1531 aaKnown RBP19.35■□□□□ 0.69
RFX2-220ENST00000592337 ERCC6Q03468 1493 aa19.35■□□□□ 0.69
RFX2-220ENST00000592337 KIF21AQ7Z4S6 1674 aa19.3■□□□□ 0.68
RFX2-220ENST00000592337 LAMC3Q9Y6N6 1575 aa19.29■□□□□ 0.68
RFX2-220ENST00000592337 CADPSQ9ULU8 1353 aa19.18■□□□□ 0.66
RFX2-220ENST00000592337 THOC2Q8NI27 1593 aaKnown RBP19.15■□□□□ 0.66
RFX2-220ENST00000592337 CCDC88BA6NC98 1476 aa19.13■□□□□ 0.65
RFX2-220ENST00000592337 PRDM2Q13029 1718 aa19.12■□□□□ 0.65
RFX2-220ENST00000592337 PDS5BQ9NTI5 1447 aa19.1■□□□□ 0.65
RFX2-220ENST00000592337 SUPT5HO00267 1087 aaKnown RBP19.1■□□□□ 0.65
RFX2-220ENST00000592337 CUX2O14529 1486 aa19.06■□□□□ 0.64
RFX2-220ENST00000592337 CFTRP13569 1480 aa19.05■□□□□ 0.64
RFX2-220ENST00000592337 FANCD2Q9BXW9 1451 aa19.03■□□□□ 0.64
RFX2-220ENST00000592337 CEP164Q9UPV0 1460 aa19■□□□□ 0.63
RFX2-220ENST00000592337 MRC2Q9UBG0 1479 aa18.97■□□□□ 0.63
RFX2-220ENST00000592337 WDR62O43379 1518 aa18.91■□□□□ 0.62
RFX2-220ENST00000592337 URB2Q14146 1524 aaKnown RBP18.87■□□□□ 0.61
RFX2-220ENST00000592337 TOPBP1Q92547 1522 aa18.73■□□□□ 0.59
RFX2-220ENST00000592337 DNMBPQ6XZF7 1577 aa18.69■□□□□ 0.58
RFX2-220ENST00000592337 ABCC8Q09428 1581 aa18.61■□□□□ 0.57
RFX2-220ENST00000592337 DNAJC5Q9H3Z4 198 aa18.61■□□□□ 0.57
RFX2-220ENST00000592337 CUX1P39880 1505 aa18.59■□□□□ 0.57
RFX2-220ENST00000592337 ZNF608Q9ULD9 1512 aaPredicted RBP18.59■□□□□ 0.57
RFX2-220ENST00000592337 IFT140Q96RY7 1462 aa18.56■□□□□ 0.56
RFX2-220ENST00000592337 TARBP1Q13395 1621 aaKnown RBP18.56■□□□□ 0.56
RFX2-220ENST00000592337 POLA1P09884 1462 aaPredicted RBP18.55■□□□□ 0.56
RFX2-220ENST00000592337 RAD54L2Q9Y4B4 1467 aa18.53■□□□□ 0.56
RFX2-220ENST00000592337 EIF4G3O43432 1585 aaKnown RBP18.53■□□□□ 0.56
RFX2-220ENST00000592337 FGD5Q6ZNL6 1462 aa18.52■□□□□ 0.56
RFX2-220ENST00000592337 SOGA1O94964 1423 aa18.46■□□□□ 0.55
RFX2-220ENST00000592337 AQRO60306 1485 aaKnown RBP eCLIP18.46■□□□□ 0.54
RFX2-220ENST00000592337 SYNJ1O43426 1573 aa18.45■□□□□ 0.54
RFX2-220ENST00000592337 WDR97A6NE52 1622 aa18.44■□□□□ 0.54
RFX2-220ENST00000592337 BIVM-ERCC5R4GMW8 1640 aa18.43■□□□□ 0.54
RFX2-220ENST00000592337 CHD1O14646 1710 aa18.41■□□□□ 0.54
RFX2-220ENST00000592337 TDRD9Q8NDG6 1382 aaKnown RBP18.41■□□□□ 0.54
RFX2-220ENST00000592337 WRNQ14191 1432 aaPredicted RBP eCLIP18.4■□□□□ 0.54
RFX2-220ENST00000592337 TOP2BQ02880 1626 aa18.39■□□□□ 0.53
RFX2-220ENST00000592337 PBRM1Q86U86 1689 aa18.38■□□□□ 0.53
RFX2-220ENST00000592337 FBLN2P98095 1184 aa18.29■□□□□ 0.52
RFX2-220ENST00000592337 SNAPC4Q5SXM2 1469 aa18.28■□□□□ 0.52
RFX2-220ENST00000592337 ABCA5Q8WWZ7 1642 aa18.28■□□□□ 0.52
RFX2-220ENST00000592337 ABCA10Q8WWZ4 1543 aa18.28■□□□□ 0.52
RFX2-220ENST00000592337 OSCARQ8IYS5 282 aa18.27■□□□□ 0.52
RFX2-220ENST00000592337 GAPVD1Q14C86 1478 aa18.26■□□□□ 0.51
RFX2-220ENST00000592337 GRIN2BQ13224 1484 aa18.23■□□□□ 0.51
RFX2-220ENST00000592337 MAGI1Q96QZ7 1491 aaPredicted RBP18.17■□□□□ 0.5
RFX2-220ENST00000592337 RIMBP3CA6NJZ7 1639 aa18.13■□□□□ 0.49
RFX2-220ENST00000592337 RIMBP3BA6NNM3 1639 aa18.13■□□□□ 0.49
RFX2-220ENST00000592337 RIMBP3Q9UFD9 1639 aa18.13■□□□□ 0.49
RFX2-220ENST00000592337 CHMP7Q8WUX9 453 aaPredicted RBP18.13■□□□□ 0.49
RFX2-220ENST00000592337 SYNJ2O15056 1496 aa18.12■□□□□ 0.49
RFX2-220ENST00000592337 ADAMTS12P58397 1594 aa18.12■□□□□ 0.49
RFX2-220ENST00000592337 TRIM41Q8WV44 630 aa18.09■□□□□ 0.49
RFX2-220ENST00000592337 ARHGEF11O15085 1522 aa18.05■□□□□ 0.48
RFX2-220ENST00000592337 ERICH3Q5RHP9 1530 aa18.05■□□□□ 0.48
RFX2-220ENST00000592337 CLASP1Q7Z460 1538 aa18.04■□□□□ 0.48
RFX2-220ENST00000592337 GRIN2AQ12879 1464 aa18.02■□□□□ 0.48
RFX2-220ENST00000592337 CEP170Q5SW79 1584 aa18■□□□□ 0.47
RFX2-220ENST00000592337 FHAD1B1AJZ9 1412 aa17.99■□□□□ 0.47
RFX2-220ENST00000592337 KIF27Q86VH2 1401 aa17.98■□□□□ 0.47
RFX2-220ENST00000592337 RUSC2Q8N2Y8 1516 aa17.96■□□□□ 0.47
RFX2-220ENST00000592337 CUL7Q14999 1698 aa17.94■□□□□ 0.46
RFX2-220ENST00000592337 IGF1RP08069 1367 aa17.92■□□□□ 0.46
RFX2-220ENST00000592337 ARAP1Q96P48 1450 aa17.91■□□□□ 0.46
RFX2-220ENST00000592337 CYB5RLQ6IPT4 315 aa17.91■□□□□ 0.46
RFX2-220ENST00000592337 ERCC6L2Q5T890 1561 aa17.9■□□□□ 0.46
RFX2-220ENST00000592337 NUP160Q12769 1436 aa17.89■□□□□ 0.46
RFX2-220ENST00000592337 SHROOM2Q13796 1616 aa17.84■□□□□ 0.45
RFX2-220ENST00000592337 CARMIL1Q5VZK9 1371 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms