RNA–Protein interactions for RNA: ENST00000592327.1

KDSR-212, Transcript of 3-ketodihydrosphingosine reductase, humanhuman

TSL 4

Gene KDSR, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDSR-212ENST00000592327 NISCHQ9Y2I1 1504 aa48.66■■■■■ 5.38
KDSR-212ENST00000592327 CCDC180Q9P1Z9 1646 aa43.58■■■■■ 4.57
KDSR-212ENST00000592327 ABCC9O60706 1549 aa43■■■■■ 4.47
KDSR-212ENST00000592327 RB1CC1Q8TDY2 1594 aa41.21■■■■■ 4.19
KDSR-212ENST00000592327 NACADO15069 1562 aa40.99■■■■■ 4.15
KDSR-212ENST00000592327 DCAF8L2P0C7V8 631 aa40.89■■■■■ 4.14
KDSR-212ENST00000592327 MYO15BQ96JP2 1530 aa40.52■■■■■ 4.08
KDSR-212ENST00000592327 ZCCHC6Q5VYS8 1495 aaKnown RBP40.47■■■■■ 4.07
KDSR-212ENST00000592327 UNC13AQ9UPW8 1703 aa40.3■■■■■ 4.04
KDSR-212ENST00000592327 DCAF1Q9Y4B6 1507 aa40.21■■■■■ 4.03
KDSR-212ENST00000592327 PABPN1Q86U42 306 aaKnown RBP eCLIP40.03■■■■■ 4
KDSR-212ENST00000592327 BICRAQ9NZM4 1560 aa39.87■■■■□ 3.97
KDSR-212ENST00000592327 SCRIBQ14160 1630 aa39.77■■■■□ 3.96
KDSR-212ENST00000592327 DNAJC5BQ9UF47 199 aa39.63■■■■□ 3.93
KDSR-212ENST00000592327 SHROOM4Q9ULL8 1493 aa39.46■■■■□ 3.91
KDSR-212ENST00000592327 EIF4G1Q04637 1599 aaKnown RBP38.92■■■■□ 3.82
KDSR-212ENST00000592327 CC2D2AQ9P2K1 1620 aa38.89■■■■□ 3.82
KDSR-212ENST00000592327 CECR2Q9BXF3 1484 aa38.67■■■■□ 3.78
KDSR-212ENST00000592327 SMARCA4P51532 1647 aa37.93■■■■□ 3.66
KDSR-212ENST00000592327 BAZ1AQ9NRL2 1556 aaPredicted RBP37.82■■■■□ 3.65
KDSR-212ENST00000592327 SMARCA2P51531 1590 aa37.76■■■■□ 3.64
KDSR-212ENST00000592327 NCAPD3P42695 1498 aa37.73■■■■□ 3.63
KDSR-212ENST00000592327 ATAD2BQ9ULI0 1458 aa37.73■■■■□ 3.63
KDSR-212ENST00000592327 HMGXB3Q12766 1538 aa37.63■■■■□ 3.61
KDSR-212ENST00000592327 BAZ1BQ9UIG0 1483 aaKnown RBP37.52■■■■□ 3.6
KDSR-212ENST00000592327 MROH2BQ7Z745 1585 aa37.5■■■■□ 3.59
KDSR-212ENST00000592327 PEG3Q9GZU2 1588 aa37.48■■■■□ 3.59
KDSR-212ENST00000592327 ERCC6Q03468 1493 aa37.19■■■■□ 3.54
KDSR-212ENST00000592327 WIZO95785 1651 aa37.15■■■■□ 3.54
KDSR-212ENST00000592327 NESP48681 1621 aa37.05■■■■□ 3.52
KDSR-212ENST00000592327 LAMC3Q9Y6N6 1575 aa36.95■■■■□ 3.51
KDSR-212ENST00000592327 RSF1Q96T23 1441 aaPredicted RBP36.86■■■■□ 3.49
KDSR-212ENST00000592327 CUX2O14529 1486 aa36.85■■■■□ 3.49
KDSR-212ENST00000592327 TOP2AP11388 1531 aaKnown RBP36.73■■■■□ 3.47
KDSR-212ENST00000592327 KIF21AQ7Z4S6 1674 aa36.71■■■■□ 3.47
KDSR-212ENST00000592327 PDS5BQ9NTI5 1447 aa36.68■■■■□ 3.46
KDSR-212ENST00000592327 THOC2Q8NI27 1593 aaKnown RBP36.65■■■■□ 3.46
KDSR-212ENST00000592327 CADPSQ9ULU8 1353 aa36.64■■■■□ 3.46
KDSR-212ENST00000592327 MRC2Q9UBG0 1479 aa36.36■■■■□ 3.41
KDSR-212ENST00000592327 CEP164Q9UPV0 1460 aa36.35■■■■□ 3.41
KDSR-212ENST00000592327 CFTRP13569 1480 aa36.34■■■■□ 3.41
KDSR-212ENST00000592327 FANCD2Q9BXW9 1451 aa36.31■■■■□ 3.4
KDSR-212ENST00000592327 PRDM2Q13029 1718 aa36.25■■■■□ 3.39
KDSR-212ENST00000592327 WDR62O43379 1518 aa36.24■■■■□ 3.39
KDSR-212ENST00000592327 CCDC88BA6NC98 1476 aa36.2■■■■□ 3.39
KDSR-212ENST00000592327 DNAJC5Q9H3Z4 198 aa36.07■■■■□ 3.36
KDSR-212ENST00000592327 URB2Q14146 1524 aaKnown RBP35.93■■■■□ 3.34
KDSR-212ENST00000592327 SUPT5HO00267 1087 aaKnown RBP35.71■■■■□ 3.31
KDSR-212ENST00000592327 TOPBP1Q92547 1522 aa35.67■■■■□ 3.3
KDSR-212ENST00000592327 ABCC8Q09428 1581 aa35.64■■■■□ 3.3
KDSR-212ENST00000592327 DNMBPQ6XZF7 1577 aa35.64■■■■□ 3.3
KDSR-212ENST00000592327 IFT140Q96RY7 1462 aa35.55■■■■□ 3.28
KDSR-212ENST00000592327 ZNF608Q9ULD9 1512 aaPredicted RBP35.4■■■■□ 3.26
KDSR-212ENST00000592327 EIF4G3O43432 1585 aaKnown RBP35.36■■■■□ 3.25
KDSR-212ENST00000592327 POLA1P09884 1462 aaPredicted RBP35.33■■■■□ 3.25
KDSR-212ENST00000592327 TARBP1Q13395 1621 aaKnown RBP35.3■■■■□ 3.24
KDSR-212ENST00000592327 CUX1P39880 1505 aa35.23■■■■□ 3.23
KDSR-212ENST00000592327 FGD5Q6ZNL6 1462 aa35.22■■■■□ 3.23
KDSR-212ENST00000592327 OSCARQ8IYS5 282 aa35.17■■■■□ 3.22
KDSR-212ENST00000592327 RAD54L2Q9Y4B4 1467 aa35.16■■■■□ 3.22
KDSR-212ENST00000592327 SOGA1O94964 1423 aa35.15■■■■□ 3.22
KDSR-212ENST00000592327 AQRO60306 1485 aaKnown RBP eCLIP35.13■■■■□ 3.21
KDSR-212ENST00000592327 WDR97A6NE52 1622 aa35.06■■■■□ 3.2
KDSR-212ENST00000592327 CHD1O14646 1710 aa35.03■■■■□ 3.2
KDSR-212ENST00000592327 TDRD9Q8NDG6 1382 aaKnown RBP35■■■■□ 3.19
KDSR-212ENST00000592327 TRIM41Q8WV44 630 aa34.89■■■■□ 3.18
KDSR-212ENST00000592327 SNAPC4Q5SXM2 1469 aa34.89■■■■□ 3.18
KDSR-212ENST00000592327 FBLN2P98095 1184 aa34.88■■■■□ 3.17
KDSR-212ENST00000592327 PBRM1Q86U86 1689 aa34.87■■■■□ 3.17
KDSR-212ENST00000592327 BIVM-ERCC5R4GMW8 1640 aa34.87■■■■□ 3.17
KDSR-212ENST00000592327 WRNQ14191 1432 aaPredicted RBP eCLIP34.86■■■■□ 3.17
KDSR-212ENST00000592327 TOP2BQ02880 1626 aa34.84■■■■□ 3.17
KDSR-212ENST00000592327 GRIN2BQ13224 1484 aa34.84■■■■□ 3.17
KDSR-212ENST00000592327 SYNJ1O43426 1573 aa34.83■■■■□ 3.17
KDSR-212ENST00000592327 MAGI1Q96QZ7 1491 aaPredicted RBP34.8■■■■□ 3.16
KDSR-212ENST00000592327 ABCA10Q8WWZ4 1543 aa34.8■■■■□ 3.16
KDSR-212ENST00000592327 RIMBP3CA6NJZ7 1639 aa34.78■■■■□ 3.16
KDSR-212ENST00000592327 RIMBP3BA6NNM3 1639 aa34.78■■■■□ 3.16
KDSR-212ENST00000592327 RIMBP3Q9UFD9 1639 aa34.78■■■■□ 3.16
KDSR-212ENST00000592327 GAPVD1Q14C86 1478 aa34.78■■■■□ 3.16
KDSR-212ENST00000592327 ABCA5Q8WWZ7 1642 aa34.77■■■■□ 3.16
KDSR-212ENST00000592327 ARHGEF11O15085 1522 aa34.7■■■■□ 3.14
KDSR-212ENST00000592327 CHMP7Q8WUX9 453 aaPredicted RBP34.67■■■■□ 3.14
KDSR-212ENST00000592327 SYNJ2O15056 1496 aa34.65■■■■□ 3.14
KDSR-212ENST00000592327 CLASP1Q7Z460 1538 aa34.53■■■■□ 3.12
KDSR-212ENST00000592327 ADAMTS12P58397 1594 aa34.5■■■■□ 3.11
KDSR-212ENST00000592327 ERICH3Q5RHP9 1530 aa34.41■■■■□ 3.1
KDSR-212ENST00000592327 GRIN2AQ12879 1464 aa34.39■■■■□ 3.1
KDSR-212ENST00000592327 ARAP1Q96P48 1450 aa34.36■■■■□ 3.09
KDSR-212ENST00000592327 FHAD1B1AJZ9 1412 aa34.34■■■■□ 3.09
KDSR-212ENST00000592327 CYB5RLQ6IPT4 315 aa34.33■■■■□ 3.09
KDSR-212ENST00000592327 CEP170Q5SW79 1584 aa34.26■■■■□ 3.07
KDSR-212ENST00000592327 NUP160Q12769 1436 aa34.19■■■■□ 3.06
KDSR-212ENST00000592327 KIF27Q86VH2 1401 aa34.17■■■■□ 3.06
KDSR-212ENST00000592327 CUL7Q14999 1698 aa34.11■■■■□ 3.05
KDSR-212ENST00000592327 SHROOM2Q13796 1616 aa34.04■■■■□ 3.04
KDSR-212ENST00000592327 RUSC2Q8N2Y8 1516 aa34.01■■■■□ 3.04
KDSR-212ENST00000592327 ERCC6L2Q5T890 1561 aa34.01■■■■□ 3.03
KDSR-212ENST00000592327 IGF1RP08069 1367 aa33.95■■■■□ 3.02
KDSR-212ENST00000592327 TRHP20396 242 aaPredicted RBP33.89■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 174.1 ms