RNA–Protein interactions for RNA: ENST00000592323.5

GRN-219, Transcript of granulin precursor, humanhuman

TSL 4

Gene GRN, Length 550 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-219ENST00000592323 NISCHQ9Y2I1 1504 aa36.64■■■■□ 3.46
GRN-219ENST00000592323 ABCC9O60706 1549 aa32.75■■■□□ 2.83
GRN-219ENST00000592323 CCDC180Q9P1Z9 1646 aa32.44■■■□□ 2.78
GRN-219ENST00000592323 DNAJC5BQ9UF47 199 aa31.15■■■□□ 2.58
GRN-219ENST00000592323 RB1CC1Q8TDY2 1594 aa31.04■■■□□ 2.56
GRN-219ENST00000592323 NACADO15069 1562 aa30.74■■■□□ 2.51
GRN-219ENST00000592323 ZCCHC6Q5VYS8 1495 aaKnown RBP30.67■■■□□ 2.5
GRN-219ENST00000592323 UNC13AQ9UPW8 1703 aa30.41■■■□□ 2.46
GRN-219ENST00000592323 DCAF1Q9Y4B6 1507 aa30.41■■■□□ 2.46
GRN-219ENST00000592323 PABPN1Q86U42 306 aaKnown RBP eCLIP30.38■■■□□ 2.45
GRN-219ENST00000592323 MYO15BQ96JP2 1530 aa30.32■■■□□ 2.44
GRN-219ENST00000592323 DCAF8L2P0C7V8 631 aa30.28■■■□□ 2.44
GRN-219ENST00000592323 BICRAQ9NZM4 1560 aa30.2■■■□□ 2.42
GRN-219ENST00000592323 SHROOM4Q9ULL8 1493 aa29.76■■■□□ 2.35
GRN-219ENST00000592323 CC2D2AQ9P2K1 1620 aa29.62■■■□□ 2.33
GRN-219ENST00000592323 CECR2Q9BXF3 1484 aa29.57■■■□□ 2.32
GRN-219ENST00000592323 EIF4G1Q04637 1599 aaKnown RBP29.46■■■□□ 2.31
GRN-219ENST00000592323 SCRIBQ14160 1630 aa29.45■■■□□ 2.31
GRN-219ENST00000592323 DNAJC5Q9H3Z4 198 aa28.95■■■□□ 2.22
GRN-219ENST00000592323 CUX2O14529 1486 aa28.47■■■□□ 2.15
GRN-219ENST00000592323 NCAPD3P42695 1498 aa28.39■■■□□ 2.13
GRN-219ENST00000592323 BAZ1AQ9NRL2 1556 aaPredicted RBP28.35■■■□□ 2.13
GRN-219ENST00000592323 SMARCA4P51532 1647 aa28.29■■■□□ 2.12
GRN-219ENST00000592323 ERCC6Q03468 1493 aa28.28■■■□□ 2.12
GRN-219ENST00000592323 MROH2BQ7Z745 1585 aa28.23■■■□□ 2.11
GRN-219ENST00000592323 ATAD2BQ9ULI0 1458 aa28.21■■■□□ 2.11
GRN-219ENST00000592323 HMGXB3Q12766 1538 aa28.14■■■□□ 2.1
GRN-219ENST00000592323 RSF1Q96T23 1441 aaPredicted RBP28.14■■■□□ 2.1
GRN-219ENST00000592323 SMARCA2P51531 1590 aa28.11■■■□□ 2.09
GRN-219ENST00000592323 PEG3Q9GZU2 1588 aa28.06■■■□□ 2.08
GRN-219ENST00000592323 NESP48681 1621 aa28.03■■■□□ 2.08
GRN-219ENST00000592323 WIZO95785 1651 aa27.92■■■□□ 2.06
GRN-219ENST00000592323 THOC2Q8NI27 1593 aaKnown RBP27.9■■■□□ 2.06
GRN-219ENST00000592323 BAZ1BQ9UIG0 1483 aaKnown RBP27.88■■■□□ 2.05
GRN-219ENST00000592323 LAMC3Q9Y6N6 1575 aa27.82■■■□□ 2.04
GRN-219ENST00000592323 SUPT5HO00267 1087 aaKnown RBP27.76■■■□□ 2.03
GRN-219ENST00000592323 TOP2AP11388 1531 aaKnown RBP27.71■■■□□ 2.03
GRN-219ENST00000592323 KIF21AQ7Z4S6 1674 aa27.7■■■□□ 2.02
GRN-219ENST00000592323 PDS5BQ9NTI5 1447 aa27.62■■■□□ 2.01
GRN-219ENST00000592323 CADPSQ9ULU8 1353 aa27.46■■□□□ 1.99
GRN-219ENST00000592323 MRC2Q9UBG0 1479 aa27.41■■□□□ 1.98
GRN-219ENST00000592323 WDR62O43379 1518 aa27.4■■□□□ 1.98
GRN-219ENST00000592323 TRIM41Q8WV44 630 aa27.37■■□□□ 1.97
GRN-219ENST00000592323 CCDC88BA6NC98 1476 aa27.37■■□□□ 1.97
GRN-219ENST00000592323 CEP164Q9UPV0 1460 aa27.2■■□□□ 1.95
GRN-219ENST00000592323 FANCD2Q9BXW9 1451 aa27.13■■□□□ 1.93
GRN-219ENST00000592323 CFTRP13569 1480 aa27.09■■□□□ 1.93
GRN-219ENST00000592323 OSCARQ8IYS5 282 aa27.04■■□□□ 1.92
GRN-219ENST00000592323 URB2Q14146 1524 aaKnown RBP26.96■■□□□ 1.91
GRN-219ENST00000592323 PRDM2Q13029 1718 aa26.9■■□□□ 1.9
GRN-219ENST00000592323 RIMBP3CA6NJZ7 1639 aa26.79■■□□□ 1.88
GRN-219ENST00000592323 RIMBP3BA6NNM3 1639 aa26.79■■□□□ 1.88
GRN-219ENST00000592323 RIMBP3Q9UFD9 1639 aa26.79■■□□□ 1.88
GRN-219ENST00000592323 IFT140Q96RY7 1462 aa26.69■■□□□ 1.86
GRN-219ENST00000592323 ZNF608Q9ULD9 1512 aaPredicted RBP26.69■■□□□ 1.86
GRN-219ENST00000592323 ARHGEF11O15085 1522 aa26.65■■□□□ 1.86
GRN-219ENST00000592323 TOPBP1Q92547 1522 aa26.59■■□□□ 1.85
GRN-219ENST00000592323 EIF4G3O43432 1585 aaKnown RBP26.54■■□□□ 1.84
GRN-219ENST00000592323 ABCC8Q09428 1581 aa26.52■■□□□ 1.84
GRN-219ENST00000592323 WRNQ14191 1432 aaPredicted RBP eCLIP26.49■■□□□ 1.83
GRN-219ENST00000592323 DNMBPQ6XZF7 1577 aa26.46■■□□□ 1.83
GRN-219ENST00000592323 CUX1P39880 1505 aa26.44■■□□□ 1.82
GRN-219ENST00000592323 TARBP1Q13395 1621 aaKnown RBP26.44■■□□□ 1.82
GRN-219ENST00000592323 CHD1O14646 1710 aa26.44■■□□□ 1.82
GRN-219ENST00000592323 CYB5RLQ6IPT4 315 aa26.41■■□□□ 1.82
GRN-219ENST00000592323 SYNJ1O43426 1573 aa26.4■■□□□ 1.82
GRN-219ENST00000592323 TOP2BQ02880 1626 aa26.39■■□□□ 1.81
GRN-219ENST00000592323 BIVM-ERCC5R4GMW8 1640 aa26.39■■□□□ 1.81
GRN-219ENST00000592323 AQRO60306 1485 aaKnown RBP eCLIP26.37■■□□□ 1.812e-10■■■■■ 44.6
GRN-219ENST00000592323 CHIC1Q5VXU3 224 aa26.36■■□□□ 1.81
GRN-219ENST00000592323 ARAP1Q96P48 1450 aa26.36■■□□□ 1.81
GRN-219ENST00000592323 POLA1P09884 1462 aaPredicted RBP26.3■■□□□ 1.8
GRN-219ENST00000592323 FGD5Q6ZNL6 1462 aa26.24■■□□□ 1.79
GRN-219ENST00000592323 TRHP20396 242 aaPredicted RBP26.21■■□□□ 1.79
GRN-219ENST00000592323 FBLN2P98095 1184 aa26.19■■□□□ 1.78
GRN-219ENST00000592323 RAD54L2Q9Y4B4 1467 aa26.17■■□□□ 1.78
GRN-219ENST00000592323 WDR97A6NE52 1622 aa26.15■■□□□ 1.78
GRN-219ENST00000592323 CLASP1Q7Z460 1538 aa26.14■■□□□ 1.77
GRN-219ENST00000592323 SOGA1O94964 1423 aa26.13■■□□□ 1.77
GRN-219ENST00000592323 TDRD9Q8NDG6 1382 aaKnown RBP26.12■■□□□ 1.77
GRN-219ENST00000592323 SNAPC4Q5SXM2 1469 aa26.09■■□□□ 1.77
GRN-219ENST00000592323 ABCA10Q8WWZ4 1543 aa26.06■■□□□ 1.76
GRN-219ENST00000592323 MAGI1Q96QZ7 1491 aaPredicted RBP26.04■■□□□ 1.76
GRN-219ENST00000592323 CHMP7Q8WUX9 453 aaPredicted RBP25.98■■□□□ 1.75
GRN-219ENST00000592323 GRIN2BQ13224 1484 aa25.98■■□□□ 1.75
GRN-219ENST00000592323 SYNJ2O15056 1496 aa25.95■■□□□ 1.74
GRN-219ENST00000592323 KIF27Q86VH2 1401 aa25.89■■□□□ 1.74
GRN-219ENST00000592323 ABCA5Q8WWZ7 1642 aa25.89■■□□□ 1.74
GRN-219ENST00000592323 PBRM1Q86U86 1689 aa25.87■■□□□ 1.73
GRN-219ENST00000592323 EEA1Q15075 1411 aa25.84■■□□□ 1.73
GRN-219ENST00000592323 GAPVD1Q14C86 1478 aa25.84■■□□□ 1.73
GRN-219ENST00000592323 RUSC2Q8N2Y8 1516 aa25.83■■□□□ 1.72
GRN-219ENST00000592323 AEBP2Q6ZN18 517 aaPredicted RBP25.77■■□□□ 1.72
GRN-219ENST00000592323 ERICH3Q5RHP9 1530 aa25.75■■□□□ 1.71
GRN-219ENST00000592323 IGF1RP08069 1367 aa25.73■■□□□ 1.71
GRN-219ENST00000592323 CSRNP3Q8WYN3 585 aa25.67■■□□□ 1.7
GRN-219ENST00000592323 ERCC6L2Q5T890 1561 aa25.66■■□□□ 1.7
GRN-219ENST00000592323 GRIN2AQ12879 1464 aa25.65■■□□□ 1.7
GRN-219ENST00000592323 CUL7Q14999 1698 aa25.62■■□□□ 1.69
GRN-219ENST00000592323 FAM9AQ8IZU1 332 aaPredicted RBP25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms