RNA–Protein interactions for RNA: ENST00000592253.5

ITGA2B-208, Transcript of integrin subunit alpha 2b, humanhuman

TSL 4

Gene ITGA2B, Length 462 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA2B-208ENST00000592253 NISCHQ9Y2I1 1504 aa29.33■■■□□ 2.29
ITGA2B-208ENST00000592253 CCDC180Q9P1Z9 1646 aa26.05■■□□□ 1.76
ITGA2B-208ENST00000592253 ABCC9O60706 1549 aa25.46■■□□□ 1.67
ITGA2B-208ENST00000592253 DCAF8L2P0C7V8 631 aa24.54■■□□□ 1.52
ITGA2B-208ENST00000592253 RB1CC1Q8TDY2 1594 aa24.5■■□□□ 1.51
ITGA2B-208ENST00000592253 NACADO15069 1562 aa24.47■■□□□ 1.51
ITGA2B-208ENST00000592253 ZCCHC6Q5VYS8 1495 aaKnown RBP24.45■■□□□ 1.51
ITGA2B-208ENST00000592253 MYO15BQ96JP2 1530 aa24.3■■□□□ 1.48
ITGA2B-208ENST00000592253 DCAF1Q9Y4B6 1507 aa24.25■■□□□ 1.47
ITGA2B-208ENST00000592253 UNC13AQ9UPW8 1703 aa23.92■■□□□ 1.42
ITGA2B-208ENST00000592253 SCRIBQ14160 1630 aa23.83■■□□□ 1.41
ITGA2B-208ENST00000592253 PABPN1Q86U42 306 aaKnown RBP eCLIP23.79■■□□□ 1.4
ITGA2B-208ENST00000592253 BICRAQ9NZM4 1560 aa23.73■■□□□ 1.39
ITGA2B-208ENST00000592253 SHROOM4Q9ULL8 1493 aa23.49■■□□□ 1.35
ITGA2B-208ENST00000592253 DNAJC5BQ9UF47 199 aa23.23■■□□□ 1.31
ITGA2B-208ENST00000592253 EIF4G1Q04637 1599 aaKnown RBP23.12■■□□□ 1.29
ITGA2B-208ENST00000592253 CC2D2AQ9P2K1 1620 aa23.01■■□□□ 1.27
ITGA2B-208ENST00000592253 CECR2Q9BXF3 1484 aa22.85■■□□□ 1.25
ITGA2B-208ENST00000592253 SMARCA4P51532 1647 aa22.75■■□□□ 1.23
ITGA2B-208ENST00000592253 BAZ1AQ9NRL2 1556 aaPredicted RBP22.75■■□□□ 1.23
ITGA2B-208ENST00000592253 MROH2BQ7Z745 1585 aa22.61■■□□□ 1.21
ITGA2B-208ENST00000592253 ATAD2BQ9ULI0 1458 aa22.6■■□□□ 1.21
ITGA2B-208ENST00000592253 SMARCA2P51531 1590 aa22.59■■□□□ 1.21
ITGA2B-208ENST00000592253 NCAPD3P42695 1498 aa22.55■■□□□ 1.2
ITGA2B-208ENST00000592253 PEG3Q9GZU2 1588 aa22.5■■□□□ 1.19
ITGA2B-208ENST00000592253 HMGXB3Q12766 1538 aa22.48■■□□□ 1.19
ITGA2B-208ENST00000592253 BAZ1BQ9UIG0 1483 aaKnown RBP22.46■■□□□ 1.19
ITGA2B-208ENST00000592253 WIZO95785 1651 aa22.39■■□□□ 1.17
ITGA2B-208ENST00000592253 RSF1Q96T23 1441 aaPredicted RBP22.37■■□□□ 1.17
ITGA2B-208ENST00000592253 TOP2AP11388 1531 aaKnown RBP22.16■■□□□ 1.14
ITGA2B-208ENST00000592253 NESP48681 1621 aa22.03■■□□□ 1.12
ITGA2B-208ENST00000592253 LAMC3Q9Y6N6 1575 aa21.99■■□□□ 1.11
ITGA2B-208ENST00000592253 ERCC6Q03468 1493 aa21.96■■□□□ 1.11
ITGA2B-208ENST00000592253 CADPSQ9ULU8 1353 aa21.92■■□□□ 1.1
ITGA2B-208ENST00000592253 SUPT5HO00267 1087 aaKnown RBP21.91■■□□□ 1.1
ITGA2B-208ENST00000592253 CCDC88BA6NC98 1476 aa21.88■■□□□ 1.09
ITGA2B-208ENST00000592253 PDS5BQ9NTI5 1447 aa21.84■■□□□ 1.09
ITGA2B-208ENST00000592253 CFTRP13569 1480 aa21.8■■□□□ 1.08
ITGA2B-208ENST00000592253 KIF21AQ7Z4S6 1674 aa21.79■■□□□ 1.08
ITGA2B-208ENST00000592253 FANCD2Q9BXW9 1451 aa21.7■■□□□ 1.06
ITGA2B-208ENST00000592253 THOC2Q8NI27 1593 aaKnown RBP21.69■■□□□ 1.06
ITGA2B-208ENST00000592253 CEP164Q9UPV0 1460 aa21.68■■□□□ 1.06
ITGA2B-208ENST00000592253 PRDM2Q13029 1718 aa21.66■■□□□ 1.06
ITGA2B-208ENST00000592253 CUX2O14529 1486 aa21.65■■□□□ 1.06
ITGA2B-208ENST00000592253 MRC2Q9UBG0 1479 aa21.62■■□□□ 1.05
ITGA2B-208ENST00000592253 WDR62O43379 1518 aa21.54■■□□□ 1.04
ITGA2B-208ENST00000592253 URB2Q14146 1524 aaKnown RBP21.46■■□□□ 1.03
ITGA2B-208ENST00000592253 TOPBP1Q92547 1522 aa21.35■■□□□ 1.01
ITGA2B-208ENST00000592253 ABCC8Q09428 1581 aa21.34■■□□□ 1.01
ITGA2B-208ENST00000592253 DNMBPQ6XZF7 1577 aa21.34■■□□□ 1.01
ITGA2B-208ENST00000592253 CUX1P39880 1505 aa21.22■□□□□ 0.99
ITGA2B-208ENST00000592253 IFT140Q96RY7 1462 aa21.2■□□□□ 0.98
ITGA2B-208ENST00000592253 POLA1P09884 1462 aaPredicted RBP21.17■□□□□ 0.98
ITGA2B-208ENST00000592253 FGD5Q6ZNL6 1462 aa21.14■□□□□ 0.98
ITGA2B-208ENST00000592253 WRNQ14191 1432 aaPredicted RBP eCLIP21.12■□□□□ 0.97
ITGA2B-208ENST00000592253 ZNF608Q9ULD9 1512 aaPredicted RBP21.1■□□□□ 0.97
ITGA2B-208ENST00000592253 RAD54L2Q9Y4B4 1467 aa21.09■□□□□ 0.97
ITGA2B-208ENST00000592253 TARBP1Q13395 1621 aaKnown RBP21.09■□□□□ 0.97
ITGA2B-208ENST00000592253 SOGA1O94964 1423 aa21.09■□□□□ 0.97
ITGA2B-208ENST00000592253 SYNJ1O43426 1573 aa21.06■□□□□ 0.96
ITGA2B-208ENST00000592253 TOP2BQ02880 1626 aa21.05■□□□□ 0.96
ITGA2B-208ENST00000592253 BIVM-ERCC5R4GMW8 1640 aa21.05■□□□□ 0.96
ITGA2B-208ENST00000592253 EIF4G3O43432 1585 aaKnown RBP21.05■□□□□ 0.96
ITGA2B-208ENST00000592253 AQRO60306 1485 aaKnown RBP eCLIP20.99■□□□□ 0.952e-7■■■■■ 43.2
ITGA2B-208ENST00000592253 TDRD9Q8NDG6 1382 aaKnown RBP20.97■□□□□ 0.95
ITGA2B-208ENST00000592253 WDR97A6NE52 1622 aa20.96■□□□□ 0.95
ITGA2B-208ENST00000592253 ABCA10Q8WWZ4 1543 aa20.92■□□□□ 0.94
ITGA2B-208ENST00000592253 DNAJC5Q9H3Z4 198 aa20.87■□□□□ 0.93
ITGA2B-208ENST00000592253 GAPVD1Q14C86 1478 aa20.86■□□□□ 0.93
ITGA2B-208ENST00000592253 GRIN2BQ13224 1484 aa20.84■□□□□ 0.93
ITGA2B-208ENST00000592253 ABCA5Q8WWZ7 1642 aa20.84■□□□□ 0.93
ITGA2B-208ENST00000592253 SNAPC4Q5SXM2 1469 aa20.83■□□□□ 0.93
ITGA2B-208ENST00000592253 PBRM1Q86U86 1689 aa20.83■□□□□ 0.92
ITGA2B-208ENST00000592253 MAGI1Q96QZ7 1491 aaPredicted RBP20.77■□□□□ 0.92
ITGA2B-208ENST00000592253 FBLN2P98095 1184 aa20.77■□□□□ 0.92
ITGA2B-208ENST00000592253 OSCARQ8IYS5 282 aa20.76■□□□□ 0.91
ITGA2B-208ENST00000592253 CHD1O14646 1710 aa20.75■□□□□ 0.91
ITGA2B-208ENST00000592253 CHMP7Q8WUX9 453 aaPredicted RBP20.7■□□□□ 0.9
ITGA2B-208ENST00000592253 SYNJ2O15056 1496 aa20.69■□□□□ 0.9
ITGA2B-208ENST00000592253 ERICH3Q5RHP9 1530 aa20.68■□□□□ 0.9
ITGA2B-208ENST00000592253 TRIM41Q8WV44 630 aa20.68■□□□□ 0.9
ITGA2B-208ENST00000592253 KIF27Q86VH2 1401 aa20.67■□□□□ 0.9
ITGA2B-208ENST00000592253 ADAMTS12P58397 1594 aa20.66■□□□□ 0.9
ITGA2B-208ENST00000592253 FHAD1B1AJZ9 1412 aa20.61■□□□□ 0.89
ITGA2B-208ENST00000592253 GRIN2AQ12879 1464 aa20.57■□□□□ 0.88
ITGA2B-208ENST00000592253 IGF1RP08069 1367 aa20.53■□□□□ 0.88
ITGA2B-208ENST00000592253 CUL7Q14999 1698 aa20.53■□□□□ 0.88
ITGA2B-208ENST00000592253 CLASP1Q7Z460 1538 aa20.52■□□□□ 0.87
ITGA2B-208ENST00000592253 RUSC2Q8N2Y8 1516 aa20.49■□□□□ 0.87
ITGA2B-208ENST00000592253 CEP170Q5SW79 1584 aa20.47■□□□□ 0.87
ITGA2B-208ENST00000592253 RIMBP3CA6NJZ7 1639 aa20.45■□□□□ 0.87
ITGA2B-208ENST00000592253 RIMBP3BA6NNM3 1639 aa20.45■□□□□ 0.87
ITGA2B-208ENST00000592253 RIMBP3Q9UFD9 1639 aa20.45■□□□□ 0.87
ITGA2B-208ENST00000592253 NUP160Q12769 1436 aa20.45■□□□□ 0.86
ITGA2B-208ENST00000592253 ARHGEF11O15085 1522 aa20.45■□□□□ 0.86
ITGA2B-208ENST00000592253 CARMIL1Q5VZK9 1371 aa20.45■□□□□ 0.86
ITGA2B-208ENST00000592253 CHIC1Q5VXU3 224 aa20.43■□□□□ 0.86
ITGA2B-208ENST00000592253 RAPGEF2Q9Y4G8 1499 aa20.35■□□□□ 0.85
ITGA2B-208ENST00000592253 EEA1Q15075 1411 aa20.31■□□□□ 0.84
ITGA2B-208ENST00000592253 SHROOM2Q13796 1616 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms