RNA–Protein interactions for RNA: ENST00000592207.5

MARK4-208, Transcript of microtubule affinity regulating kinase 4, humanhuman

TSL 3

Gene MARK4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK4-208ENST00000592207 NISCHQ9Y2I1 1504 aa48.83■■■■■ 5.41
MARK4-208ENST00000592207 CCDC180Q9P1Z9 1646 aa43.66■■■■■ 4.58
MARK4-208ENST00000592207 ABCC9O60706 1549 aa43.13■■■■■ 4.5
MARK4-208ENST00000592207 RB1CC1Q8TDY2 1594 aa41.35■■■■■ 4.21
MARK4-208ENST00000592207 NACADO15069 1562 aa41.19■■■■■ 4.18
MARK4-208ENST00000592207 DCAF8L2P0C7V8 631 aa41.02■■■■■ 4.16
MARK4-208ENST00000592207 MYO15BQ96JP2 1530 aa40.8■■■■■ 4.12
MARK4-208ENST00000592207 ZCCHC6Q5VYS8 1495 aaKnown RBP40.58■■■■■ 4.09
MARK4-208ENST00000592207 DCAF1Q9Y4B6 1507 aa40.42■■■■■ 4.06
MARK4-208ENST00000592207 UNC13AQ9UPW8 1703 aa40.3■■■■■ 4.04
MARK4-208ENST00000592207 PABPN1Q86U42 306 aaKnown RBP eCLIP40.21■■■■■ 4.03
MARK4-208ENST00000592207 BICRAQ9NZM4 1560 aa40.01■■■■■ 4
MARK4-208ENST00000592207 DNAJC5BQ9UF47 199 aa39.97■■■■□ 3.99
MARK4-208ENST00000592207 SCRIBQ14160 1630 aa39.74■■■■□ 3.95
MARK4-208ENST00000592207 SHROOM4Q9ULL8 1493 aa39.7■■■■□ 3.95
MARK4-208ENST00000592207 EIF4G1Q04637 1599 aaKnown RBP39.05■■■■□ 3.84
MARK4-208ENST00000592207 CC2D2AQ9P2K1 1620 aa39■■■■□ 3.83
MARK4-208ENST00000592207 CECR2Q9BXF3 1484 aa38.85■■■■□ 3.81
MARK4-208ENST00000592207 SMARCA4P51532 1647 aa37.99■■■■□ 3.67
MARK4-208ENST00000592207 NCAPD3P42695 1498 aa37.99■■■■□ 3.67
MARK4-208ENST00000592207 ATAD2BQ9ULI0 1458 aa37.92■■■■□ 3.66
MARK4-208ENST00000592207 BAZ1AQ9NRL2 1556 aaPredicted RBP37.92■■■■□ 3.66
MARK4-208ENST00000592207 SMARCA2P51531 1590 aa37.89■■■■□ 3.66
MARK4-208ENST00000592207 HMGXB3Q12766 1538 aa37.77■■■■□ 3.64
MARK4-208ENST00000592207 PEG3Q9GZU2 1588 aa37.64■■■■□ 3.62
MARK4-208ENST00000592207 BAZ1BQ9UIG0 1483 aaKnown RBP37.6■■■■□ 3.61
MARK4-208ENST00000592207 MROH2BQ7Z745 1585 aa37.59■■■■□ 3.61
MARK4-208ENST00000592207 ERCC6Q03468 1493 aa37.28■■■■□ 3.56
MARK4-208ENST00000592207 WIZO95785 1651 aa37.15■■■■□ 3.54
MARK4-208ENST00000592207 NESP48681 1621 aa37.14■■■■□ 3.54
MARK4-208ENST00000592207 LAMC3Q9Y6N6 1575 aa37.08■■■■□ 3.53
MARK4-208ENST00000592207 CUX2O14529 1486 aa37.08■■■■□ 3.53
MARK4-208ENST00000592207 RSF1Q96T23 1441 aaPredicted RBP37■■■■□ 3.51
MARK4-208ENST00000592207 PDS5BQ9NTI5 1447 aa36.88■■■■□ 3.49
MARK4-208ENST00000592207 CADPSQ9ULU8 1353 aa36.87■■■■□ 3.49
MARK4-208ENST00000592207 TOP2AP11388 1531 aaKnown RBP36.78■■■■□ 3.48
MARK4-208ENST00000592207 THOC2Q8NI27 1593 aaKnown RBP36.73■■■■□ 3.47
MARK4-208ENST00000592207 KIF21AQ7Z4S6 1674 aa36.71■■■■□ 3.47
MARK4-208ENST00000592207 CFTRP13569 1480 aa36.53■■■■□ 3.44
MARK4-208ENST00000592207 MRC2Q9UBG0 1479 aa36.49■■■■□ 3.43
MARK4-208ENST00000592207 DNAJC5Q9H3Z4 198 aa36.47■■■■□ 3.43
MARK4-208ENST00000592207 CEP164Q9UPV0 1460 aa36.45■■■■□ 3.43
MARK4-208ENST00000592207 FANCD2Q9BXW9 1451 aa36.43■■■■□ 3.42
MARK4-208ENST00000592207 WDR62O43379 1518 aa36.37■■■■□ 3.41
MARK4-208ENST00000592207 CCDC88BA6NC98 1476 aa36.32■■■■□ 3.41
MARK4-208ENST00000592207 PRDM2Q13029 1718 aa36.21■■■■□ 3.39
MARK4-208ENST00000592207 URB2Q14146 1524 aaKnown RBP36.05■■■■□ 3.36
MARK4-208ENST00000592207 ABCC8Q09428 1581 aa35.84■■■■□ 3.33
MARK4-208ENST00000592207 TOPBP1Q92547 1522 aa35.78■■■■□ 3.32
MARK4-208ENST00000592207 SUPT5HO00267 1087 aaKnown RBP35.71■■■■□ 3.31
MARK4-208ENST00000592207 IFT140Q96RY7 1462 aa35.71■■■■□ 3.31
MARK4-208ENST00000592207 DNMBPQ6XZF7 1577 aa35.71■■■■□ 3.31
MARK4-208ENST00000592207 ZNF608Q9ULD9 1512 aaPredicted RBP35.51■■■■□ 3.27
MARK4-208ENST00000592207 OSCARQ8IYS5 282 aa35.46■■■■□ 3.27
MARK4-208ENST00000592207 POLA1P09884 1462 aaPredicted RBP35.44■■■■□ 3.26
MARK4-208ENST00000592207 TARBP1Q13395 1621 aaKnown RBP35.39■■■■□ 3.26
MARK4-208ENST00000592207 EIF4G3O43432 1585 aaKnown RBP35.38■■■■□ 3.25
MARK4-208ENST00000592207 SOGA1O94964 1423 aa35.31■■■■□ 3.24
MARK4-208ENST00000592207 CUX1P39880 1505 aa35.3■■■■□ 3.24
MARK4-208ENST00000592207 FGD5Q6ZNL6 1462 aa35.29■■■■□ 3.24
MARK4-208ENST00000592207 AQRO60306 1485 aaKnown RBP eCLIP35.27■■■■□ 3.242e-8■■■■□ 23.2
MARK4-208ENST00000592207 RAD54L2Q9Y4B4 1467 aa35.26■■■■□ 3.23
MARK4-208ENST00000592207 WDR97A6NE52 1622 aa35.19■■■■□ 3.22
MARK4-208ENST00000592207 TDRD9Q8NDG6 1382 aaKnown RBP35.13■■■■□ 3.21
MARK4-208ENST00000592207 TRIM41Q8WV44 630 aa35.05■■■■□ 3.2
MARK4-208ENST00000592207 CHD1O14646 1710 aa35.01■■■■□ 3.2
MARK4-208ENST00000592207 FBLN2P98095 1184 aa34.99■■■■□ 3.19
MARK4-208ENST00000592207 GRIN2BQ13224 1484 aa34.97■■■■□ 3.19
MARK4-208ENST00000592207 SNAPC4Q5SXM2 1469 aa34.96■■■■□ 3.19
MARK4-208ENST00000592207 WRNQ14191 1432 aaPredicted RBP eCLIP34.94■■■■□ 3.18
MARK4-208ENST00000592207 MAGI1Q96QZ7 1491 aaPredicted RBP34.94■■■■□ 3.18
MARK4-208ENST00000592207 ABCA10Q8WWZ4 1543 aa34.94■■■■□ 3.18
MARK4-208ENST00000592207 TOP2BQ02880 1626 aa34.9■■■■□ 3.18
MARK4-208ENST00000592207 GAPVD1Q14C86 1478 aa34.9■■■■□ 3.18
MARK4-208ENST00000592207 BIVM-ERCC5R4GMW8 1640 aa34.89■■■■□ 3.18
MARK4-208ENST00000592207 RIMBP3CA6NJZ7 1639 aa34.87■■■■□ 3.17
MARK4-208ENST00000592207 RIMBP3BA6NNM3 1639 aa34.87■■■■□ 3.17
MARK4-208ENST00000592207 RIMBP3Q9UFD9 1639 aa34.87■■■■□ 3.17
MARK4-208ENST00000592207 CHMP7Q8WUX9 453 aaPredicted RBP34.85■■■■□ 3.17
MARK4-208ENST00000592207 ARHGEF11O15085 1522 aa34.83■■■■□ 3.17
MARK4-208ENST00000592207 SYNJ1O43426 1573 aa34.82■■■■□ 3.16
MARK4-208ENST00000592207 PBRM1Q86U86 1689 aa34.82■■■■□ 3.16
MARK4-208ENST00000592207 ABCA5Q8WWZ7 1642 aa34.81■■■■□ 3.16
MARK4-208ENST00000592207 SYNJ2O15056 1496 aa34.79■■■■□ 3.16
MARK4-208ENST00000592207 CLASP1Q7Z460 1538 aa34.64■■■■□ 3.14
MARK4-208ENST00000592207 CYB5RLQ6IPT4 315 aa34.55■■■■□ 3.12
MARK4-208ENST00000592207 ERICH3Q5RHP9 1530 aa34.53■■■■□ 3.12
MARK4-208ENST00000592207 ADAMTS12P58397 1594 aa34.53■■■■□ 3.12
MARK4-208ENST00000592207 GRIN2AQ12879 1464 aa34.5■■■■□ 3.11
MARK4-208ENST00000592207 ARAP1Q96P48 1450 aa34.5■■■■□ 3.11
MARK4-208ENST00000592207 FHAD1B1AJZ9 1412 aa34.49■■■■□ 3.11
MARK4-208ENST00000592207 NUP160Q12769 1436 aa34.37■■■■□ 3.09
MARK4-208ENST00000592207 CEP170Q5SW79 1584 aa34.3■■■■□ 3.08
MARK4-208ENST00000592207 KIF27Q86VH2 1401 aa34.29■■■■□ 3.08
MARK4-208ENST00000592207 IGF1RP08069 1367 aa34.15■■■■□ 3.06
MARK4-208ENST00000592207 SHROOM2Q13796 1616 aa34.14■■■■□ 3.06
MARK4-208ENST00000592207 CUL7Q14999 1698 aa34.12■■■■□ 3.05
MARK4-208ENST00000592207 ERCC6L2Q5T890 1561 aa34.06■■■■□ 3.04
MARK4-208ENST00000592207 TRHP20396 242 aaPredicted RBP34.05■■■■□ 3.04
MARK4-208ENST00000592207 JPH4Q96JJ6 628 aa34.03■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms