RNA–Protein interactions for RNA: ENST00000592065.2

GFAP-221, Transcript of glial fibrillary acidic protein, humanhuman

TSL 3

Gene GFAP, Length 2,539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-221ENST00000592065 NISCHQ9Y2I1 1504 aa31.02■■■□□ 2.56
GFAP-221ENST00000592065 CCDC180Q9P1Z9 1646 aa27.45■■□□□ 1.98
GFAP-221ENST00000592065 ABCC9O60706 1549 aa27.28■■□□□ 1.96
GFAP-221ENST00000592065 DCAF8L2P0C7V8 631 aa26.28■■□□□ 1.8
GFAP-221ENST00000592065 RB1CC1Q8TDY2 1594 aa25.94■■□□□ 1.74
GFAP-221ENST00000592065 NACADO15069 1562 aa25.83■■□□□ 1.73
GFAP-221ENST00000592065 ZCCHC6Q5VYS8 1495 aaKnown RBP25.82■■□□□ 1.72
GFAP-221ENST00000592065 PABPN1Q86U42 306 aaKnown RBP eCLIP25.56■■□□□ 1.68
GFAP-221ENST00000592065 MYO15BQ96JP2 1530 aa25.53■■□□□ 1.68
GFAP-221ENST00000592065 UNC13AQ9UPW8 1703 aa25.51■■□□□ 1.67
GFAP-221ENST00000592065 DCAF1Q9Y4B6 1507 aa25.45■■□□□ 1.67
GFAP-221ENST00000592065 SCRIBQ14160 1630 aa25.35■■□□□ 1.65
GFAP-221ENST00000592065 BICRAQ9NZM4 1560 aa25.29■■□□□ 1.64
GFAP-221ENST00000592065 DNAJC5BQ9UF47 199 aa25.17■■□□□ 1.62
GFAP-221ENST00000592065 SHROOM4Q9ULL8 1493 aa24.85■■□□□ 1.57
GFAP-221ENST00000592065 EIF4G1Q04637 1599 aaKnown RBP24.61■■□□□ 1.53
GFAP-221ENST00000592065 CC2D2AQ9P2K1 1620 aa24.56■■□□□ 1.52
GFAP-221ENST00000592065 CECR2Q9BXF3 1484 aa24.4■■□□□ 1.5
GFAP-221ENST00000592065 SMARCA4P51532 1647 aa24.1■■□□□ 1.45
GFAP-221ENST00000592065 MROH2BQ7Z745 1585 aa24.03■■□□□ 1.44
GFAP-221ENST00000592065 BAZ1AQ9NRL2 1556 aaPredicted RBP23.99■■□□□ 1.43
GFAP-221ENST00000592065 ATAD2BQ9ULI0 1458 aa23.99■■□□□ 1.43
GFAP-221ENST00000592065 NCAPD3P42695 1498 aa23.89■■□□□ 1.41
GFAP-221ENST00000592065 SMARCA2P51531 1590 aa23.85■■□□□ 1.41
GFAP-221ENST00000592065 BAZ1BQ9UIG0 1483 aaKnown RBP23.8■■□□□ 1.4
GFAP-221ENST00000592065 WIZO95785 1651 aa23.8■■□□□ 1.4
GFAP-221ENST00000592065 HMGXB3Q12766 1538 aa23.74■■□□□ 1.39
GFAP-221ENST00000592065 PEG3Q9GZU2 1588 aa23.73■■□□□ 1.39
GFAP-221ENST00000592065 RSF1Q96T23 1441 aaPredicted RBP23.68■■□□□ 1.38
GFAP-221ENST00000592065 NESP48681 1621 aa23.62■■□□□ 1.37
GFAP-221ENST00000592065 ERCC6Q03468 1493 aa23.42■■□□□ 1.34
GFAP-221ENST00000592065 TOP2AP11388 1531 aaKnown RBP23.37■■□□□ 1.33
GFAP-221ENST00000592065 SUPT5HO00267 1087 aaKnown RBP23.28■■□□□ 1.32
GFAP-221ENST00000592065 LAMC3Q9Y6N6 1575 aa23.25■■□□□ 1.31
GFAP-221ENST00000592065 CADPSQ9ULU8 1353 aa23.25■■□□□ 1.31
GFAP-221ENST00000592065 KIF21AQ7Z4S6 1674 aa23.24■■□□□ 1.31
GFAP-221ENST00000592065 CCDC88BA6NC98 1476 aa23.19■■□□□ 1.3
GFAP-221ENST00000592065 PDS5BQ9NTI5 1447 aa23.12■■□□□ 1.29
GFAP-221ENST00000592065 THOC2Q8NI27 1593 aaKnown RBP23.1■■□□□ 1.29
GFAP-221ENST00000592065 CFTRP13569 1480 aa23.09■■□□□ 1.29
GFAP-221ENST00000592065 FANCD2Q9BXW9 1451 aa23.04■■□□□ 1.28
GFAP-221ENST00000592065 CUX2O14529 1486 aa22.99■■□□□ 1.27
GFAP-221ENST00000592065 CEP164Q9UPV0 1460 aa22.99■■□□□ 1.27
GFAP-221ENST00000592065 MRC2Q9UBG0 1479 aa22.94■■□□□ 1.26
GFAP-221ENST00000592065 URB2Q14146 1524 aaKnown RBP22.86■■□□□ 1.25
GFAP-221ENST00000592065 WDR62O43379 1518 aa22.85■■□□□ 1.25
GFAP-221ENST00000592065 PRDM2Q13029 1718 aa22.84■■□□□ 1.25
GFAP-221ENST00000592065 TOPBP1Q92547 1522 aa22.66■■□□□ 1.22
GFAP-221ENST00000592065 ZNF608Q9ULD9 1512 aaPredicted RBP22.57■■□□□ 1.2
GFAP-221ENST00000592065 DNMBPQ6XZF7 1577 aa22.56■■□□□ 1.2
GFAP-221ENST00000592065 CUX1P39880 1505 aa22.52■■□□□ 1.2
GFAP-221ENST00000592065 DNAJC5Q9H3Z4 198 aa22.51■■□□□ 1.19
GFAP-221ENST00000592065 RAD54L2Q9Y4B4 1467 aa22.5■■□□□ 1.19
GFAP-221ENST00000592065 POLA1P09884 1462 aaPredicted RBP22.5■■□□□ 1.19
GFAP-221ENST00000592065 ABCC8Q09428 1581 aa22.49■■□□□ 1.19
GFAP-221ENST00000592065 FGD5Q6ZNL6 1462 aa22.45■■□□□ 1.18
GFAP-221ENST00000592065 IFT140Q96RY7 1462 aa22.44■■□□□ 1.18
GFAP-221ENST00000592065 AQRO60306 1485 aaKnown RBP eCLIP22.42■■□□□ 1.18
GFAP-221ENST00000592065 TARBP1Q13395 1621 aaKnown RBP22.4■■□□□ 1.18
GFAP-221ENST00000592065 TDRD9Q8NDG6 1382 aaKnown RBP22.39■■□□□ 1.17
GFAP-221ENST00000592065 EIF4G3O43432 1585 aaKnown RBP22.38■■□□□ 1.17
GFAP-221ENST00000592065 SOGA1O94964 1423 aa22.37■■□□□ 1.17
GFAP-221ENST00000592065 SYNJ1O43426 1573 aa22.34■■□□□ 1.17
GFAP-221ENST00000592065 WRNQ14191 1432 aaPredicted RBP eCLIP22.31■■□□□ 1.16
GFAP-221ENST00000592065 FBLN2P98095 1184 aa22.24■■□□□ 1.15
GFAP-221ENST00000592065 TOP2BQ02880 1626 aa22.21■■□□□ 1.15
GFAP-221ENST00000592065 CHIC1Q5VXU3 224 aa22.21■■□□□ 1.15
GFAP-221ENST00000592065 BIVM-ERCC5R4GMW8 1640 aa22.19■■□□□ 1.14
GFAP-221ENST00000592065 WDR97A6NE52 1622 aa22.18■■□□□ 1.14
GFAP-221ENST00000592065 OSCARQ8IYS5 282 aa22.16■■□□□ 1.14
GFAP-221ENST00000592065 SNAPC4Q5SXM2 1469 aa22.15■■□□□ 1.14
GFAP-221ENST00000592065 CHD1O14646 1710 aa22.13■■□□□ 1.13
GFAP-221ENST00000592065 ABCA10Q8WWZ4 1543 aa22.11■■□□□ 1.13
GFAP-221ENST00000592065 GAPVD1Q14C86 1478 aa22.1■■□□□ 1.13
GFAP-221ENST00000592065 ABCA5Q8WWZ7 1642 aa22.07■■□□□ 1.12
GFAP-221ENST00000592065 PBRM1Q86U86 1689 aa22.07■■□□□ 1.12
GFAP-221ENST00000592065 GRIN2BQ13224 1484 aa22.06■■□□□ 1.12
GFAP-221ENST00000592065 CHMP7Q8WUX9 453 aaPredicted RBP22.02■■□□□ 1.11
GFAP-221ENST00000592065 TRIM41Q8WV44 630 aa21.99■■□□□ 1.11
GFAP-221ENST00000592065 MAGI1Q96QZ7 1491 aaPredicted RBP21.96■■□□□ 1.11
GFAP-221ENST00000592065 SYNJ2O15056 1496 aa21.93■■□□□ 1.1
GFAP-221ENST00000592065 ADAMTS12P58397 1594 aa21.87■■□□□ 1.09
GFAP-221ENST00000592065 RIMBP3CA6NJZ7 1639 aa21.87■■□□□ 1.09
GFAP-221ENST00000592065 RIMBP3BA6NNM3 1639 aa21.87■■□□□ 1.09
GFAP-221ENST00000592065 RIMBP3Q9UFD9 1639 aa21.87■■□□□ 1.09
GFAP-221ENST00000592065 ARHGEF11O15085 1522 aa21.86■■□□□ 1.09
GFAP-221ENST00000592065 HRCP23327 699 aa21.85■■□□□ 1.09
GFAP-221ENST00000592065 RUSC2Q8N2Y8 1516 aa21.83■■□□□ 1.09
GFAP-221ENST00000592065 GRIN2AQ12879 1464 aa21.82■■□□□ 1.08
GFAP-221ENST00000592065 ERICH3Q5RHP9 1530 aa21.81■■□□□ 1.08
GFAP-221ENST00000592065 KIF27Q86VH2 1401 aa21.79■■□□□ 1.08
GFAP-221ENST00000592065 CLASP1Q7Z460 1538 aa21.79■■□□□ 1.08
GFAP-221ENST00000592065 FHAD1B1AJZ9 1412 aa21.78■■□□□ 1.08
GFAP-221ENST00000592065 CYB5RLQ6IPT4 315 aa21.78■■□□□ 1.08
GFAP-221ENST00000592065 CEP170Q5SW79 1584 aa21.78■■□□□ 1.08
GFAP-221ENST00000592065 IGF1RP08069 1367 aa21.77■■□□□ 1.08
GFAP-221ENST00000592065 ERCC6L2Q5T890 1561 aa21.7■■□□□ 1.06
GFAP-221ENST00000592065 ARAP1Q96P48 1450 aa21.7■■□□□ 1.06
GFAP-221ENST00000592065 NUP160Q12769 1436 aa21.68■■□□□ 1.06
GFAP-221ENST00000592065 CARMIL1Q5VZK9 1371 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms