RNA–Protein interactions for RNA: ENST00000592064.1

RTN2-212, Transcript of reticulon 2, humanhuman

TSL 2

Gene RTN2, Length 915 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN2-212ENST00000592064 NISCHQ9Y2I1 1504 aa44.54■■■■■ 4.72
RTN2-212ENST00000592064 ABCC9O60706 1549 aa40.11■■■■■ 4.01
RTN2-212ENST00000592064 CCDC180Q9P1Z9 1646 aa39.97■■■■□ 3.99
RTN2-212ENST00000592064 RB1CC1Q8TDY2 1594 aa38.14■■■■□ 3.7
RTN2-212ENST00000592064 NACADO15069 1562 aa37.86■■■■□ 3.65
RTN2-212ENST00000592064 DCAF8L2P0C7V8 631 aa37.77■■■■□ 3.64
RTN2-212ENST00000592064 DNAJC5BQ9UF47 199 aa37.72■■■■□ 3.63
RTN2-212ENST00000592064 PABPN1Q86U42 306 aaKnown RBP eCLIP37.37■■■■□ 3.57
RTN2-212ENST00000592064 MYO15BQ96JP2 1530 aa37.3■■■■□ 3.56
RTN2-212ENST00000592064 UNC13AQ9UPW8 1703 aa37.22■■■■□ 3.55
RTN2-212ENST00000592064 BICRAQ9NZM4 1560 aa36.97■■■■□ 3.51
RTN2-212ENST00000592064 ZCCHC6Q5VYS8 1495 aaKnown RBP36.86■■■■□ 3.49
RTN2-212ENST00000592064 DCAF1Q9Y4B6 1507 aa36.78■■■■□ 3.48
RTN2-212ENST00000592064 SHROOM4Q9ULL8 1493 aa36.51■■■■□ 3.44
RTN2-212ENST00000592064 SCRIBQ14160 1630 aa36.41■■■■□ 3.42
RTN2-212ENST00000592064 CC2D2AQ9P2K1 1620 aa36.21■■■■□ 3.39
RTN2-212ENST00000592064 CECR2Q9BXF3 1484 aa36.15■■■■□ 3.38
RTN2-212ENST00000592064 EIF4G1Q04637 1599 aaKnown RBP36.1■■■■□ 3.37
RTN2-212ENST00000592064 NCAPD3P42695 1498 aa34.96■■■■□ 3.19
RTN2-212ENST00000592064 ATAD2BQ9ULI0 1458 aa34.83■■■■□ 3.17
RTN2-212ENST00000592064 DNAJC5Q9H3Z4 198 aa34.75■■■■□ 3.15
RTN2-212ENST00000592064 SMARCA4P51532 1647 aa34.73■■■■□ 3.15
RTN2-212ENST00000592064 SMARCA2P51531 1590 aa34.73■■■■□ 3.15
RTN2-212ENST00000592064 ERCC6Q03468 1493 aa34.67■■■■□ 3.14
RTN2-212ENST00000592064 HMGXB3Q12766 1538 aa34.65■■■■□ 3.14
RTN2-212ENST00000592064 CUX2O14529 1486 aa34.61■■■■□ 3.13
RTN2-212ENST00000592064 BAZ1AQ9NRL2 1556 aaPredicted RBP34.58■■■■□ 3.13
RTN2-212ENST00000592064 BAZ1BQ9UIG0 1483 aaKnown RBP34.49■■■■□ 3.11
RTN2-212ENST00000592064 NESP48681 1621 aa34.4■■■■□ 3.1
RTN2-212ENST00000592064 PEG3Q9GZU2 1588 aa34.4■■■■□ 3.1
RTN2-212ENST00000592064 MROH2BQ7Z745 1585 aa34.3■■■■□ 3.08
RTN2-212ENST00000592064 LAMC3Q9Y6N6 1575 aa34.17■■■■□ 3.06
RTN2-212ENST00000592064 THOC2Q8NI27 1593 aaKnown RBP34.03■■■■□ 3.04
RTN2-212ENST00000592064 PDS5BQ9NTI5 1447 aa34.03■■■■□ 3.04
RTN2-212ENST00000592064 KIF21AQ7Z4S6 1674 aa33.93■■■■□ 3.02
RTN2-212ENST00000592064 CADPSQ9ULU8 1353 aa33.92■■■■□ 3.02
RTN2-212ENST00000592064 WIZO95785 1651 aa33.87■■■■□ 3.01
RTN2-212ENST00000592064 MRC2Q9UBG0 1479 aa33.69■■■□□ 2.98
RTN2-212ENST00000592064 WDR62O43379 1518 aa33.58■■■□□ 2.97
RTN2-212ENST00000592064 RSF1Q96T23 1441 aaPredicted RBP33.58■■■□□ 2.97
RTN2-212ENST00000592064 CEP164Q9UPV0 1460 aa33.55■■■□□ 2.96
RTN2-212ENST00000592064 FANCD2Q9BXW9 1451 aa33.5■■■□□ 2.95
RTN2-212ENST00000592064 CFTRP13569 1480 aa33.48■■■□□ 2.95
RTN2-212ENST00000592064 TOP2AP11388 1531 aaKnown RBP33.45■■■□□ 2.95
RTN2-212ENST00000592064 URB2Q14146 1524 aaKnown RBP33.2■■■□□ 2.91
RTN2-212ENST00000592064 TRIM41Q8WV44 630 aa33.2■■■□□ 2.91
RTN2-212ENST00000592064 OSCARQ8IYS5 282 aa33.11■■■□□ 2.89
RTN2-212ENST00000592064 CCDC88BA6NC98 1476 aa33.1■■■□□ 2.89
RTN2-212ENST00000592064 PRDM2Q13029 1718 aa33.09■■■□□ 2.89
RTN2-212ENST00000592064 IFT140Q96RY7 1462 aa32.89■■■□□ 2.86
RTN2-212ENST00000592064 TOPBP1Q92547 1522 aa32.85■■■□□ 2.85
RTN2-212ENST00000592064 ABCC8Q09428 1581 aa32.83■■■□□ 2.85
RTN2-212ENST00000592064 ZNF608Q9ULD9 1512 aaPredicted RBP32.82■■■□□ 2.84
RTN2-212ENST00000592064 DNMBPQ6XZF7 1577 aa32.7■■■□□ 2.83
RTN2-212ENST00000592064 EIF4G3O43432 1585 aaKnown RBP32.6■■■□□ 2.81
RTN2-212ENST00000592064 RIMBP3CA6NJZ7 1639 aa32.56■■■□□ 2.8
RTN2-212ENST00000592064 RIMBP3BA6NNM3 1639 aa32.56■■■□□ 2.8
RTN2-212ENST00000592064 RIMBP3Q9UFD9 1639 aa32.56■■■□□ 2.8
RTN2-212ENST00000592064 AQRO60306 1485 aaKnown RBP eCLIP32.54■■■□□ 2.8
RTN2-212ENST00000592064 TARBP1Q13395 1621 aaKnown RBP32.53■■■□□ 2.8
RTN2-212ENST00000592064 POLA1P09884 1462 aaPredicted RBP32.5■■■□□ 2.79
RTN2-212ENST00000592064 ARHGEF11O15085 1522 aa32.47■■■□□ 2.79
RTN2-212ENST00000592064 FBLN2P98095 1184 aa32.43■■■□□ 2.78
RTN2-212ENST00000592064 SOGA1O94964 1423 aa32.41■■■□□ 2.78
RTN2-212ENST00000592064 RAD54L2Q9Y4B4 1467 aa32.39■■■□□ 2.78
RTN2-212ENST00000592064 CHD1O14646 1710 aa32.38■■■□□ 2.77
RTN2-212ENST00000592064 TDRD9Q8NDG6 1382 aaKnown RBP32.34■■■□□ 2.77
RTN2-212ENST00000592064 CYB5RLQ6IPT4 315 aa32.34■■■□□ 2.77
RTN2-212ENST00000592064 FGD5Q6ZNL6 1462 aa32.29■■■□□ 2.76
RTN2-212ENST00000592064 WDR97A6NE52 1622 aa32.22■■■□□ 2.75
RTN2-212ENST00000592064 CUX1P39880 1505 aa32.22■■■□□ 2.75
RTN2-212ENST00000592064 SNAPC4Q5SXM2 1469 aa32.18■■■□□ 2.74
RTN2-212ENST00000592064 CHMP7Q8WUX9 453 aaPredicted RBP32.17■■■□□ 2.74
RTN2-212ENST00000592064 ARAP1Q96P48 1450 aa32.12■■■□□ 2.73
RTN2-212ENST00000592064 GRIN2BQ13224 1484 aa32.11■■■□□ 2.73
RTN2-212ENST00000592064 MAGI1Q96QZ7 1491 aaPredicted RBP32.11■■■□□ 2.73
RTN2-212ENST00000592064 SUPT5HO00267 1087 aaKnown RBP32.11■■■□□ 2.73
RTN2-212ENST00000592064 SYNJ1O43426 1573 aa32.03■■■□□ 2.72
RTN2-212ENST00000592064 TRHP20396 242 aaPredicted RBP32.02■■■□□ 2.72
RTN2-212ENST00000592064 SYNJ2O15056 1496 aa32.01■■■□□ 2.71
RTN2-212ENST00000592064 CLASP1Q7Z460 1538 aa32■■■□□ 2.71
RTN2-212ENST00000592064 GAPVD1Q14C86 1478 aa31.99■■■□□ 2.71
RTN2-212ENST00000592064 ABCA10Q8WWZ4 1543 aa31.92■■■□□ 2.7
RTN2-212ENST00000592064 PBRM1Q86U86 1689 aa31.92■■■□□ 2.7
RTN2-212ENST00000592064 ABCA5Q8WWZ7 1642 aa31.84■■■□□ 2.69
RTN2-212ENST00000592064 WRNQ14191 1432 aaPredicted RBP eCLIP31.82■■■□□ 2.68
RTN2-212ENST00000592064 TOP2BQ02880 1626 aa31.69■■■□□ 2.66
RTN2-212ENST00000592064 GRIN2AQ12879 1464 aa31.68■■■□□ 2.66
RTN2-212ENST00000592064 BIVM-ERCC5R4GMW8 1640 aa31.67■■■□□ 2.66
RTN2-212ENST00000592064 ADAMTS12P58397 1594 aa31.6■■■□□ 2.65
RTN2-212ENST00000592064 FHAD1B1AJZ9 1412 aa31.58■■■□□ 2.65
RTN2-212ENST00000592064 NUP160Q12769 1436 aa31.58■■■□□ 2.65
RTN2-212ENST00000592064 CEP170Q5SW79 1584 aa31.53■■■□□ 2.64
RTN2-212ENST00000592064 ERICH3Q5RHP9 1530 aa31.52■■■□□ 2.64
RTN2-212ENST00000592064 ERCC6L2Q5T890 1561 aa31.49■■■□□ 2.63
RTN2-212ENST00000592064 SHROOM2Q13796 1616 aa31.41■■■□□ 2.62
RTN2-212ENST00000592064 JPH4Q96JJ6 628 aa31.34■■■□□ 2.61
RTN2-212ENST00000592064 PRG4Q92954 1404 aaPredicted RBP31.31■■■□□ 2.6
RTN2-212ENST00000592064 AEBP2Q6ZN18 517 aaPredicted RBP31.18■■■□□ 2.58
RTN2-212ENST00000592064 RUSC2Q8N2Y8 1516 aa31.15■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms