RNA–Protein interactions for RNA: ENST00000592041.1

TOMM40-206, Transcript of translocase of outer mitochondrial membrane 40, humanhuman

TSL 2

Gene TOMM40, Length 707 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40-206ENST00000592041 NISCHQ9Y2I1 1504 aa39.6■■■■□ 3.93
TOMM40-206ENST00000592041 CCDC180Q9P1Z9 1646 aa35.38■■■■□ 3.25
TOMM40-206ENST00000592041 ABCC9O60706 1549 aa35.15■■■■□ 3.22
TOMM40-206ENST00000592041 RB1CC1Q8TDY2 1594 aa33.51■■■□□ 2.96
TOMM40-206ENST00000592041 NACADO15069 1562 aa33.34■■■□□ 2.93
TOMM40-206ENST00000592041 DCAF8L2P0C7V8 631 aa33.3■■■□□ 2.92
TOMM40-206ENST00000592041 MYO15BQ96JP2 1530 aa32.95■■■□□ 2.87
TOMM40-206ENST00000592041 ZCCHC6Q5VYS8 1495 aaKnown RBP32.89■■■□□ 2.86
TOMM40-206ENST00000592041 UNC13AQ9UPW8 1703 aa32.88■■■□□ 2.85
TOMM40-206ENST00000592041 PABPN1Q86U42 306 aaKnown RBP eCLIP32.79■■■□□ 2.84
TOMM40-206ENST00000592041 DNAJC5BQ9UF47 199 aa32.74■■■□□ 2.83
TOMM40-206ENST00000592041 DCAF1Q9Y4B6 1507 aa32.67■■■□□ 2.82
TOMM40-206ENST00000592041 BICRAQ9NZM4 1560 aa32.62■■■□□ 2.81
TOMM40-206ENST00000592041 SCRIBQ14160 1630 aa32.34■■■□□ 2.77
TOMM40-206ENST00000592041 SHROOM4Q9ULL8 1493 aa32.04■■■□□ 2.72
TOMM40-206ENST00000592041 CC2D2AQ9P2K1 1620 aa31.75■■■□□ 2.67
TOMM40-206ENST00000592041 EIF4G1Q04637 1599 aaKnown RBP31.75■■■□□ 2.67
TOMM40-206ENST00000592041 CECR2Q9BXF3 1484 aa31.59■■■□□ 2.65
TOMM40-206ENST00000592041 SMARCA4P51532 1647 aa30.85■■■□□ 2.53
TOMM40-206ENST00000592041 NCAPD3P42695 1498 aa30.79■■■□□ 2.52
TOMM40-206ENST00000592041 ATAD2BQ9ULI0 1458 aa30.78■■■□□ 2.52
TOMM40-206ENST00000592041 BAZ1AQ9NRL2 1556 aaPredicted RBP30.69■■■□□ 2.5
TOMM40-206ENST00000592041 SMARCA2P51531 1590 aa30.66■■■□□ 2.5
TOMM40-206ENST00000592041 HMGXB3Q12766 1538 aa30.6■■■□□ 2.49
TOMM40-206ENST00000592041 MROH2BQ7Z745 1585 aa30.58■■■□□ 2.49
TOMM40-206ENST00000592041 PEG3Q9GZU2 1588 aa30.49■■■□□ 2.47
TOMM40-206ENST00000592041 BAZ1BQ9UIG0 1483 aaKnown RBP30.48■■■□□ 2.47
TOMM40-206ENST00000592041 NESP48681 1621 aa30.33■■■□□ 2.45
TOMM40-206ENST00000592041 ERCC6Q03468 1493 aa30.26■■■□□ 2.44
TOMM40-206ENST00000592041 WIZO95785 1651 aa30.24■■■□□ 2.43
TOMM40-206ENST00000592041 CUX2O14529 1486 aa30.08■■■□□ 2.41
TOMM40-206ENST00000592041 LAMC3Q9Y6N6 1575 aa30.05■■■□□ 2.4
TOMM40-206ENST00000592041 RSF1Q96T23 1441 aaPredicted RBP30.02■■■□□ 2.4
TOMM40-206ENST00000592041 KIF21AQ7Z4S6 1674 aa29.93■■■□□ 2.38
TOMM40-206ENST00000592041 THOC2Q8NI27 1593 aaKnown RBP29.92■■■□□ 2.38
TOMM40-206ENST00000592041 CADPSQ9ULU8 1353 aa29.88■■■□□ 2.37
TOMM40-206ENST00000592041 PDS5BQ9NTI5 1447 aa29.83■■■□□ 2.37
TOMM40-206ENST00000592041 TOP2AP11388 1531 aaKnown RBP29.81■■■□□ 2.36
TOMM40-206ENST00000592041 DNAJC5Q9H3Z4 198 aa29.73■■■□□ 2.35
TOMM40-206ENST00000592041 CFTRP13569 1480 aa29.61■■■□□ 2.33
TOMM40-206ENST00000592041 MRC2Q9UBG0 1479 aa29.61■■■□□ 2.33
TOMM40-206ENST00000592041 FANCD2Q9BXW9 1451 aa29.56■■■□□ 2.32
TOMM40-206ENST00000592041 CEP164Q9UPV0 1460 aa29.55■■■□□ 2.32
TOMM40-206ENST00000592041 WDR62O43379 1518 aa29.54■■■□□ 2.32
TOMM40-206ENST00000592041 CCDC88BA6NC98 1476 aa29.49■■■□□ 2.31
TOMM40-206ENST00000592041 PRDM2Q13029 1718 aa29.38■■■□□ 2.29
TOMM40-206ENST00000592041 URB2Q14146 1524 aaKnown RBP29.35■■■□□ 2.29
TOMM40-206ENST00000592041 TOPBP1Q92547 1522 aa29.05■■■□□ 2.24
TOMM40-206ENST00000592041 DNMBPQ6XZF7 1577 aa28.96■■■□□ 2.23
TOMM40-206ENST00000592041 ZNF608Q9ULD9 1512 aaPredicted RBP28.94■■■□□ 2.22
TOMM40-206ENST00000592041 IFT140Q96RY7 1462 aa28.93■■■□□ 2.22
TOMM40-206ENST00000592041 SUPT5HO00267 1087 aaKnown RBP28.93■■■□□ 2.22
TOMM40-206ENST00000592041 ABCC8Q09428 1581 aa28.9■■■□□ 2.22
TOMM40-206ENST00000592041 TARBP1Q13395 1621 aaKnown RBP28.79■■■□□ 2.2
TOMM40-206ENST00000592041 EIF4G3O43432 1585 aaKnown RBP28.78■■■□□ 2.2
TOMM40-206ENST00000592041 POLA1P09884 1462 aaPredicted RBP28.78■■■□□ 2.2
TOMM40-206ENST00000592041 OSCARQ8IYS5 282 aa28.75■■■□□ 2.19
TOMM40-206ENST00000592041 RAD54L2Q9Y4B4 1467 aa28.71■■■□□ 2.19
TOMM40-206ENST00000592041 AQRO60306 1485 aaKnown RBP eCLIP28.7■■■□□ 2.184e-6■■□□□ 14.2
TOMM40-206ENST00000592041 CUX1P39880 1505 aa28.69■■■□□ 2.18
TOMM40-206ENST00000592041 FGD5Q6ZNL6 1462 aa28.65■■■□□ 2.18
TOMM40-206ENST00000592041 SOGA1O94964 1423 aa28.62■■■□□ 2.17
TOMM40-206ENST00000592041 TRIM41Q8WV44 630 aa28.6■■■□□ 2.17
TOMM40-206ENST00000592041 TDRD9Q8NDG6 1382 aaKnown RBP28.57■■■□□ 2.16
TOMM40-206ENST00000592041 CHD1O14646 1710 aa28.54■■■□□ 2.16
TOMM40-206ENST00000592041 WDR97A6NE52 1622 aa28.46■■■□□ 2.15
TOMM40-206ENST00000592041 RIMBP3CA6NJZ7 1639 aa28.43■■■□□ 2.14
TOMM40-206ENST00000592041 RIMBP3BA6NNM3 1639 aa28.43■■■□□ 2.14
TOMM40-206ENST00000592041 RIMBP3Q9UFD9 1639 aa28.43■■■□□ 2.14
TOMM40-206ENST00000592041 SNAPC4Q5SXM2 1469 aa28.41■■■□□ 2.14
TOMM40-206ENST00000592041 FBLN2P98095 1184 aa28.41■■■□□ 2.14
TOMM40-206ENST00000592041 ARHGEF11O15085 1522 aa28.35■■■□□ 2.13
TOMM40-206ENST00000592041 GRIN2BQ13224 1484 aa28.33■■■□□ 2.13
TOMM40-206ENST00000592041 SYNJ1O43426 1573 aa28.32■■■□□ 2.12
TOMM40-206ENST00000592041 ABCA10Q8WWZ4 1543 aa28.31■■■□□ 2.12
TOMM40-206ENST00000592041 PBRM1Q86U86 1689 aa28.31■■■□□ 2.12
TOMM40-206ENST00000592041 BIVM-ERCC5R4GMW8 1640 aa28.3■■■□□ 2.12
TOMM40-206ENST00000592041 TOP2BQ02880 1626 aa28.29■■■□□ 2.12
TOMM40-206ENST00000592041 GAPVD1Q14C86 1478 aa28.28■■■□□ 2.12
TOMM40-206ENST00000592041 MAGI1Q96QZ7 1491 aaPredicted RBP28.28■■■□□ 2.12
TOMM40-206ENST00000592041 WRNQ14191 1432 aaPredicted RBP eCLIP28.28■■■□□ 2.12
TOMM40-206ENST00000592041 ABCA5Q8WWZ7 1642 aa28.28■■■□□ 2.12
TOMM40-206ENST00000592041 CHMP7Q8WUX9 453 aaPredicted RBP28.22■■■□□ 2.11
TOMM40-206ENST00000592041 SYNJ2O15056 1496 aa28.2■■■□□ 2.1
TOMM40-206ENST00000592041 CLASP1Q7Z460 1538 aa28.18■■■□□ 2.1
TOMM40-206ENST00000592041 ARAP1Q96P48 1450 aa28.12■■■□□ 2.09
TOMM40-206ENST00000592041 CYB5RLQ6IPT4 315 aa28.11■■■□□ 2.09
TOMM40-206ENST00000592041 ADAMTS12P58397 1594 aa28.04■■■□□ 2.08
TOMM40-206ENST00000592041 GRIN2AQ12879 1464 aa27.98■■■□□ 2.07
TOMM40-206ENST00000592041 ERICH3Q5RHP9 1530 aa27.93■■■□□ 2.06
TOMM40-206ENST00000592041 FHAD1B1AJZ9 1412 aa27.92■■■□□ 2.06
TOMM40-206ENST00000592041 CEP170Q5SW79 1584 aa27.92■■■□□ 2.06
TOMM40-206ENST00000592041 NUP160Q12769 1436 aa27.88■■■□□ 2.05
TOMM40-206ENST00000592041 ERCC6L2Q5T890 1561 aa27.84■■■□□ 2.05
TOMM40-206ENST00000592041 SHROOM2Q13796 1616 aa27.74■■■□□ 2.03
TOMM40-206ENST00000592041 KIF27Q86VH2 1401 aa27.69■■■□□ 2.02
TOMM40-206ENST00000592041 IGF1RP08069 1367 aa27.69■■■□□ 2.02
TOMM40-206ENST00000592041 TRHP20396 242 aaPredicted RBP27.67■■■□□ 2.02
TOMM40-206ENST00000592041 RUSC2Q8N2Y8 1516 aa27.64■■■□□ 2.02
TOMM40-206ENST00000592041 CUL7Q14999 1698 aa27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 157.9 ms