RNA–Protein interactions for RNA: ENST00000592013.1

TNFRSF11A-204, Transcript of TNF receptor superfamily member 11a, humanhuman

TSL 2

Gene TNFRSF11A, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-204ENST00000592013 NISCHQ9Y2I1 1504 aa48.79■■■■■ 5.4
TNFRSF11A-204ENST00000592013 CCDC180Q9P1Z9 1646 aa43.77■■■■■ 4.6
TNFRSF11A-204ENST00000592013 ABCC9O60706 1549 aa43.38■■■■■ 4.53
TNFRSF11A-204ENST00000592013 RB1CC1Q8TDY2 1594 aa41.58■■■■■ 4.25
TNFRSF11A-204ENST00000592013 NACADO15069 1562 aa41.36■■■■■ 4.21
TNFRSF11A-204ENST00000592013 DCAF8L2P0C7V8 631 aa41.09■■■■■ 4.17
TNFRSF11A-204ENST00000592013 MYO15BQ96JP2 1530 aa40.91■■■■■ 4.14
TNFRSF11A-204ENST00000592013 ZCCHC6Q5VYS8 1495 aaKnown RBP40.48■■■■■ 4.07
TNFRSF11A-204ENST00000592013 DCAF1Q9Y4B6 1507 aa40.43■■■■■ 4.06
TNFRSF11A-204ENST00000592013 UNC13AQ9UPW8 1703 aa40.39■■■■■ 4.06
TNFRSF11A-204ENST00000592013 PABPN1Q86U42 306 aaKnown RBP eCLIP40.38■■■■■ 4.05
TNFRSF11A-204ENST00000592013 DNAJC5BQ9UF47 199 aa40.3■■■■■ 4.04
TNFRSF11A-204ENST00000592013 BICRAQ9NZM4 1560 aa40.12■■■■■ 4.01
TNFRSF11A-204ENST00000592013 SHROOM4Q9ULL8 1493 aa39.97■■■■□ 3.99
TNFRSF11A-204ENST00000592013 SCRIBQ14160 1630 aa39.75■■■■□ 3.95
TNFRSF11A-204ENST00000592013 EIF4G1Q04637 1599 aaKnown RBP39.23■■■■□ 3.87
TNFRSF11A-204ENST00000592013 CC2D2AQ9P2K1 1620 aa39.22■■■■□ 3.87
TNFRSF11A-204ENST00000592013 CECR2Q9BXF3 1484 aa39.13■■■■□ 3.85
TNFRSF11A-204ENST00000592013 NCAPD3P42695 1498 aa38.12■■■■□ 3.69
TNFRSF11A-204ENST00000592013 SMARCA2P51531 1590 aa38.02■■■■□ 3.68
TNFRSF11A-204ENST00000592013 SMARCA4P51532 1647 aa37.99■■■■□ 3.67
TNFRSF11A-204ENST00000592013 ATAD2BQ9ULI0 1458 aa37.97■■■■□ 3.67
TNFRSF11A-204ENST00000592013 BAZ1AQ9NRL2 1556 aaPredicted RBP37.95■■■■□ 3.67
TNFRSF11A-204ENST00000592013 HMGXB3Q12766 1538 aa37.88■■■■□ 3.65
TNFRSF11A-204ENST00000592013 BAZ1BQ9UIG0 1483 aaKnown RBP37.7■■■■□ 3.63
TNFRSF11A-204ENST00000592013 PEG3Q9GZU2 1588 aa37.68■■■■□ 3.62
TNFRSF11A-204ENST00000592013 ERCC6Q03468 1493 aa37.6■■■■□ 3.61
TNFRSF11A-204ENST00000592013 MROH2BQ7Z745 1585 aa37.5■■■■□ 3.59
TNFRSF11A-204ENST00000592013 CUX2O14529 1486 aa37.47■■■■□ 3.59
TNFRSF11A-204ENST00000592013 LAMC3Q9Y6N6 1575 aa37.27■■■■□ 3.56
TNFRSF11A-204ENST00000592013 NESP48681 1621 aa37.25■■■■□ 3.55
TNFRSF11A-204ENST00000592013 PDS5BQ9NTI5 1447 aa37.1■■■■□ 3.53
TNFRSF11A-204ENST00000592013 DNAJC5Q9H3Z4 198 aa37.08■■■■□ 3.53
TNFRSF11A-204ENST00000592013 WIZO95785 1651 aa37.05■■■■□ 3.52
TNFRSF11A-204ENST00000592013 CADPSQ9ULU8 1353 aa36.98■■■■□ 3.51
TNFRSF11A-204ENST00000592013 THOC2Q8NI27 1593 aaKnown RBP36.91■■■■□ 3.5
TNFRSF11A-204ENST00000592013 RSF1Q96T23 1441 aaPredicted RBP36.86■■■■□ 3.49
TNFRSF11A-204ENST00000592013 KIF21AQ7Z4S6 1674 aa36.83■■■■□ 3.49
TNFRSF11A-204ENST00000592013 TOP2AP11388 1531 aaKnown RBP36.73■■■■□ 3.47
TNFRSF11A-204ENST00000592013 MRC2Q9UBG0 1479 aa36.67■■■■□ 3.46
TNFRSF11A-204ENST00000592013 CEP164Q9UPV0 1460 aa36.6■■■■□ 3.45
TNFRSF11A-204ENST00000592013 CFTRP13569 1480 aa36.58■■■■□ 3.45
TNFRSF11A-204ENST00000592013 WDR62O43379 1518 aa36.54■■■■□ 3.44
TNFRSF11A-204ENST00000592013 FANCD2Q9BXW9 1451 aa36.53■■■■□ 3.44
TNFRSF11A-204ENST00000592013 PRDM2Q13029 1718 aa36.25■■■■□ 3.39
TNFRSF11A-204ENST00000592013 CCDC88BA6NC98 1476 aa36.24■■■■□ 3.39
TNFRSF11A-204ENST00000592013 URB2Q14146 1524 aaKnown RBP36.12■■■■□ 3.37
TNFRSF11A-204ENST00000592013 ABCC8Q09428 1581 aa35.99■■■■□ 3.35
TNFRSF11A-204ENST00000592013 IFT140Q96RY7 1462 aa35.87■■■■□ 3.33
TNFRSF11A-204ENST00000592013 TOPBP1Q92547 1522 aa35.83■■■■□ 3.33
TNFRSF11A-204ENST00000592013 OSCARQ8IYS5 282 aa35.8■■■■□ 3.32
TNFRSF11A-204ENST00000592013 DNMBPQ6XZF7 1577 aa35.77■■■■□ 3.32
TNFRSF11A-204ENST00000592013 ZNF608Q9ULD9 1512 aaPredicted RBP35.59■■■■□ 3.29
TNFRSF11A-204ENST00000592013 TRIM41Q8WV44 630 aa35.51■■■■□ 3.28
TNFRSF11A-204ENST00000592013 EIF4G3O43432 1585 aaKnown RBP35.5■■■■□ 3.27
TNFRSF11A-204ENST00000592013 POLA1P09884 1462 aaPredicted RBP35.48■■■■□ 3.27
TNFRSF11A-204ENST00000592013 TARBP1Q13395 1621 aaKnown RBP35.46■■■■□ 3.27
TNFRSF11A-204ENST00000592013 SUPT5HO00267 1087 aaKnown RBP35.41■■■■□ 3.26
TNFRSF11A-204ENST00000592013 SOGA1O94964 1423 aa35.38■■■■□ 3.25
TNFRSF11A-204ENST00000592013 WDR97A6NE52 1622 aa35.35■■■■□ 3.25
TNFRSF11A-204ENST00000592013 AQRO60306 1485 aaKnown RBP eCLIP35.35■■■■□ 3.25
TNFRSF11A-204ENST00000592013 FGD5Q6ZNL6 1462 aa35.29■■■■□ 3.24
TNFRSF11A-204ENST00000592013 RAD54L2Q9Y4B4 1467 aa35.25■■■■□ 3.23
TNFRSF11A-204ENST00000592013 CUX1P39880 1505 aa35.23■■■■□ 3.23
TNFRSF11A-204ENST00000592013 TDRD9Q8NDG6 1382 aaKnown RBP35.19■■■■□ 3.22
TNFRSF11A-204ENST00000592013 FBLN2P98095 1184 aa35.18■■■■□ 3.22
TNFRSF11A-204ENST00000592013 CHD1O14646 1710 aa35.15■■■■□ 3.22
TNFRSF11A-204ENST00000592013 RIMBP3CA6NJZ7 1639 aa35.15■■■■□ 3.22
TNFRSF11A-204ENST00000592013 RIMBP3BA6NNM3 1639 aa35.15■■■■□ 3.22
TNFRSF11A-204ENST00000592013 RIMBP3Q9UFD9 1639 aa35.15■■■■□ 3.22
TNFRSF11A-204ENST00000592013 ARHGEF11O15085 1522 aa35.11■■■■□ 3.21
TNFRSF11A-204ENST00000592013 MAGI1Q96QZ7 1491 aaPredicted RBP35.09■■■■□ 3.21
TNFRSF11A-204ENST00000592013 GRIN2BQ13224 1484 aa35.08■■■■□ 3.21
TNFRSF11A-204ENST00000592013 SNAPC4Q5SXM2 1469 aa35.04■■■■□ 3.2
TNFRSF11A-204ENST00000592013 CHMP7Q8WUX9 453 aaPredicted RBP35.02■■■■□ 3.2
TNFRSF11A-204ENST00000592013 GAPVD1Q14C86 1478 aa34.96■■■■□ 3.19
TNFRSF11A-204ENST00000592013 ABCA10Q8WWZ4 1543 aa34.96■■■■□ 3.19
TNFRSF11A-204ENST00000592013 WRNQ14191 1432 aaPredicted RBP eCLIP34.94■■■■□ 3.18
TNFRSF11A-204ENST00000592013 SYNJ1O43426 1573 aa34.93■■■■□ 3.18
TNFRSF11A-204ENST00000592013 SYNJ2O15056 1496 aa34.93■■■■□ 3.18
TNFRSF11A-204ENST00000592013 PBRM1Q86U86 1689 aa34.86■■■■□ 3.17
TNFRSF11A-204ENST00000592013 CYB5RLQ6IPT4 315 aa34.85■■■■□ 3.17
TNFRSF11A-204ENST00000592013 TOP2BQ02880 1626 aa34.83■■■■□ 3.17
TNFRSF11A-204ENST00000592013 ABCA5Q8WWZ7 1642 aa34.83■■■■□ 3.17
TNFRSF11A-204ENST00000592013 BIVM-ERCC5R4GMW8 1640 aa34.81■■■■□ 3.16
TNFRSF11A-204ENST00000592013 CLASP1Q7Z460 1538 aa34.79■■■■□ 3.16
TNFRSF11A-204ENST00000592013 ARAP1Q96P48 1450 aa34.72■■■■□ 3.15
TNFRSF11A-204ENST00000592013 GRIN2AQ12879 1464 aa34.58■■■■□ 3.13
TNFRSF11A-204ENST00000592013 ERICH3Q5RHP9 1530 aa34.57■■■■□ 3.12
TNFRSF11A-204ENST00000592013 FHAD1B1AJZ9 1412 aa34.56■■■■□ 3.12
TNFRSF11A-204ENST00000592013 ADAMTS12P58397 1594 aa34.56■■■■□ 3.12
TNFRSF11A-204ENST00000592013 TRHP20396 242 aaPredicted RBP34.45■■■■□ 3.11
TNFRSF11A-204ENST00000592013 NUP160Q12769 1436 aa34.44■■■■□ 3.1
TNFRSF11A-204ENST00000592013 CEP170Q5SW79 1584 aa34.36■■■■□ 3.09
TNFRSF11A-204ENST00000592013 KIF27Q86VH2 1401 aa34.25■■■■□ 3.07
TNFRSF11A-204ENST00000592013 SHROOM2Q13796 1616 aa34.24■■■■□ 3.07
TNFRSF11A-204ENST00000592013 CUL7Q14999 1698 aa34.13■■■■□ 3.05
TNFRSF11A-204ENST00000592013 JPH4Q96JJ6 628 aa34.13■■■■□ 3.05
TNFRSF11A-204ENST00000592013 ERCC6L2Q5T890 1561 aa34.11■■■■□ 3.05
TNFRSF11A-204ENST00000592013 PRG4Q92954 1404 aaPredicted RBP34.1■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms