RNA–Protein interactions for RNA: ENST00000591969.1

RAVER1-203, Transcript of ribonucleoprotein, PTB binding 1, humanhuman

TSL 3

Gene RAVER1, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAVER1-203ENST00000591969 NISCHQ9Y2I1 1504 aa40.79■■■■■ 4.12
RAVER1-203ENST00000591969 ABCC9O60706 1549 aa37.94■■■■□ 3.66
RAVER1-203ENST00000591969 CCDC180Q9P1Z9 1646 aa37.17■■■■□ 3.54
RAVER1-203ENST00000591969 DNAJC5BQ9UF47 199 aa36.36■■■■□ 3.41
RAVER1-203ENST00000591969 RB1CC1Q8TDY2 1594 aa35.78■■■■□ 3.32
RAVER1-203ENST00000591969 NACADO15069 1562 aa35.28■■■■□ 3.24
RAVER1-203ENST00000591969 PABPN1Q86U42 306 aaKnown RBP eCLIP35.07■■■■□ 3.2
RAVER1-203ENST00000591969 UNC13AQ9UPW8 1703 aa35.06■■■■□ 3.2
RAVER1-203ENST00000591969 BICRAQ9NZM4 1560 aa34.76■■■■□ 3.16
RAVER1-203ENST00000591969 DCAF8L2P0C7V8 631 aa34.66■■■■□ 3.14
RAVER1-203ENST00000591969 MYO15BQ96JP2 1530 aa34.48■■■■□ 3.11
RAVER1-203ENST00000591969 CECR2Q9BXF3 1484 aa34.3■■■■□ 3.08
RAVER1-203ENST00000591969 CC2D2AQ9P2K1 1620 aa34.3■■■■□ 3.08
RAVER1-203ENST00000591969 SHROOM4Q9ULL8 1493 aa34.25■■■■□ 3.07
RAVER1-203ENST00000591969 DNAJC5Q9H3Z4 198 aa34.14■■■■□ 3.06
RAVER1-203ENST00000591969 EIF4G1Q04637 1599 aaKnown RBP33.98■■■■□ 3.03
RAVER1-203ENST00000591969 SCRIBQ14160 1630 aa33.71■■■□□ 2.99
RAVER1-203ENST00000591969 DCAF1Q9Y4B6 1507 aa33.68■■■□□ 2.98
RAVER1-203ENST00000591969 ZCCHC6Q5VYS8 1495 aaKnown RBP33.63■■■□□ 2.97
RAVER1-203ENST00000591969 CUX2O14529 1486 aa33.17■■■□□ 2.9
RAVER1-203ENST00000591969 ERCC6Q03468 1493 aa32.86■■■□□ 2.85
RAVER1-203ENST00000591969 NCAPD3P42695 1498 aa32.53■■■□□ 2.8
RAVER1-203ENST00000591969 NESP48681 1621 aa32.33■■■□□ 2.77
RAVER1-203ENST00000591969 THOC2Q8NI27 1593 aaKnown RBP32.3■■■□□ 2.76
RAVER1-203ENST00000591969 ATAD2BQ9ULI0 1458 aa32.29■■■□□ 2.76
RAVER1-203ENST00000591969 HMGXB3Q12766 1538 aa32.27■■■□□ 2.76
RAVER1-203ENST00000591969 TRIM41Q8WV44 630 aa32.21■■■□□ 2.75
RAVER1-203ENST00000591969 SMARCA2P51531 1590 aa32.2■■■□□ 2.75
RAVER1-203ENST00000591969 SMARCA4P51532 1647 aa32.08■■■□□ 2.73
RAVER1-203ENST00000591969 LAMC3Q9Y6N6 1575 aa32.02■■■□□ 2.72
RAVER1-203ENST00000591969 KIF21AQ7Z4S6 1674 aa31.99■■■□□ 2.71
RAVER1-203ENST00000591969 BAZ1BQ9UIG0 1483 aaKnown RBP31.95■■■□□ 2.7
RAVER1-203ENST00000591969 PEG3Q9GZU2 1588 aa31.79■■■□□ 2.68
RAVER1-203ENST00000591969 PDS5BQ9NTI5 1447 aa31.79■■■□□ 2.68
RAVER1-203ENST00000591969 BAZ1AQ9NRL2 1556 aaPredicted RBP31.77■■■□□ 2.68
RAVER1-203ENST00000591969 WDR62O43379 1518 aa31.61■■■□□ 2.65
RAVER1-203ENST00000591969 MRC2Q9UBG0 1479 aa31.61■■■□□ 2.65
RAVER1-203ENST00000591969 CADPSQ9ULU8 1353 aa31.45■■■□□ 2.63
RAVER1-203ENST00000591969 MROH2BQ7Z745 1585 aa31.4■■■□□ 2.62
RAVER1-203ENST00000591969 OSCARQ8IYS5 282 aa31.36■■■□□ 2.61
RAVER1-203ENST00000591969 CEP164Q9UPV0 1460 aa31.29■■■□□ 2.6
RAVER1-203ENST00000591969 RIMBP3CA6NJZ7 1639 aa31.22■■■□□ 2.59
RAVER1-203ENST00000591969 RIMBP3BA6NNM3 1639 aa31.22■■■□□ 2.59
RAVER1-203ENST00000591969 RIMBP3Q9UFD9 1639 aa31.22■■■□□ 2.59
RAVER1-203ENST00000591969 FANCD2Q9BXW9 1451 aa31.14■■■□□ 2.58
RAVER1-203ENST00000591969 WIZO95785 1651 aa31.03■■■□□ 2.56
RAVER1-203ENST00000591969 ARHGEF11O15085 1522 aa30.98■■■□□ 2.55
RAVER1-203ENST00000591969 URB2Q14146 1524 aaKnown RBP30.97■■■□□ 2.55
RAVER1-203ENST00000591969 CFTRP13569 1480 aa30.94■■■□□ 2.54
RAVER1-203ENST00000591969 PRDM2Q13029 1718 aa30.73■■■□□ 2.51
RAVER1-203ENST00000591969 ZNF608Q9ULD9 1512 aaPredicted RBP30.72■■■□□ 2.51
RAVER1-203ENST00000591969 IFT140Q96RY7 1462 aa30.7■■■□□ 2.5
RAVER1-203ENST00000591969 CYB5RLQ6IPT4 315 aa30.67■■■□□ 2.5
RAVER1-203ENST00000591969 TRHP20396 242 aaPredicted RBP30.65■■■□□ 2.5
RAVER1-203ENST00000591969 EIF4G3O43432 1585 aaKnown RBP30.6■■■□□ 2.49
RAVER1-203ENST00000591969 ARAP1Q96P48 1450 aa30.59■■■□□ 2.49
RAVER1-203ENST00000591969 CHD1O14646 1710 aa30.59■■■□□ 2.49
RAVER1-203ENST00000591969 TOP2AP11388 1531 aaKnown RBP30.57■■■□□ 2.49
RAVER1-203ENST00000591969 AEBP2Q6ZN18 517 aaPredicted RBP30.5■■■□□ 2.47
RAVER1-203ENST00000591969 TOPBP1Q92547 1522 aa30.46■■■□□ 2.47
RAVER1-203ENST00000591969 RSF1Q96T23 1441 aaPredicted RBP30.46■■■□□ 2.47
RAVER1-203ENST00000591969 ABCC8Q09428 1581 aa30.33■■■□□ 2.45
RAVER1-203ENST00000591969 TARBP1Q13395 1621 aaKnown RBP30.32■■■□□ 2.44
RAVER1-203ENST00000591969 DNMBPQ6XZF7 1577 aa30.3■■■□□ 2.44
RAVER1-203ENST00000591969 AQRO60306 1485 aaKnown RBP eCLIP30.28■■■□□ 2.443e-7■■■■■ 30.3
RAVER1-203ENST00000591969 FBLN2P98095 1184 aa30.22■■■□□ 2.43
RAVER1-203ENST00000591969 CCDC88BA6NC98 1476 aa30.16■■■□□ 2.42
RAVER1-203ENST00000591969 CLASP1Q7Z460 1538 aa30.16■■■□□ 2.42
RAVER1-203ENST00000591969 POLA1P09884 1462 aaPredicted RBP30.08■■■□□ 2.41
RAVER1-203ENST00000591969 SYNJ1O43426 1573 aa30.05■■■□□ 2.4
RAVER1-203ENST00000591969 SNAPC4Q5SXM2 1469 aa30■■■□□ 2.39
RAVER1-203ENST00000591969 WDR97A6NE52 1622 aa29.99■■■□□ 2.39
RAVER1-203ENST00000591969 RAD54L2Q9Y4B4 1467 aa29.94■■■□□ 2.38
RAVER1-203ENST00000591969 TDRD9Q8NDG6 1382 aaKnown RBP29.91■■■□□ 2.38
RAVER1-203ENST00000591969 MAGI1Q96QZ7 1491 aaPredicted RBP29.91■■■□□ 2.38
RAVER1-203ENST00000591969 SOGA1O94964 1423 aa29.87■■■□□ 2.37
RAVER1-203ENST00000591969 CHMP7Q8WUX9 453 aaPredicted RBP29.85■■■□□ 2.37
RAVER1-203ENST00000591969 GAPVD1Q14C86 1478 aa29.85■■■□□ 2.37
RAVER1-203ENST00000591969 SYNJ2O15056 1496 aa29.8■■■□□ 2.36
RAVER1-203ENST00000591969 GRIN2BQ13224 1484 aa29.77■■■□□ 2.36
RAVER1-203ENST00000591969 FGD5Q6ZNL6 1462 aa29.75■■■□□ 2.35
RAVER1-203ENST00000591969 PBRM1Q86U86 1689 aa29.71■■■□□ 2.35
RAVER1-203ENST00000591969 CUX1P39880 1505 aa29.58■■■□□ 2.33
RAVER1-203ENST00000591969 KIF13AQ9H1H9 1805 aa29.58■■■□□ 2.33
RAVER1-203ENST00000591969 ERCC6L2Q5T890 1561 aa29.57■■■□□ 2.32
RAVER1-203ENST00000591969 ABCA5Q8WWZ7 1642 aa29.49■■■□□ 2.31
RAVER1-203ENST00000591969 CEP170Q5SW79 1584 aa29.46■■■□□ 2.31
RAVER1-203ENST00000591969 GRIN2AQ12879 1464 aa29.41■■■□□ 2.3
RAVER1-203ENST00000591969 SHROOM2Q13796 1616 aa29.4■■■□□ 2.3
RAVER1-203ENST00000591969 ABCA10Q8WWZ4 1543 aa29.37■■■□□ 2.29
RAVER1-203ENST00000591969 NUP160Q12769 1436 aa29.34■■■□□ 2.29
RAVER1-203ENST00000591969 ADAMTS12P58397 1594 aa29.33■■■□□ 2.29
RAVER1-203ENST00000591969 ILDR1Q86SU0 546 aaPredicted RBP29.29■■■□□ 2.28
RAVER1-203ENST00000591969 ABCC10Q5T3U5 1492 aa29.19■■■□□ 2.26
RAVER1-203ENST00000591969 KDM4FA0A1W2PPD8 638 aa29.16■■■□□ 2.26
RAVER1-203ENST00000591969 KDM6BO15054 1643 aa29.16■■■□□ 2.26
RAVER1-203ENST00000591969 DIP2BQ9P265 1576 aa29.15■■■□□ 2.26
RAVER1-203ENST00000591969 MAPKBP1O60336 1514 aa29.14■■■□□ 2.25
RAVER1-203ENST00000591969 FHAD1B1AJZ9 1412 aa29.11■■■□□ 2.25
RAVER1-203ENST00000591969 FAM69CQ0P6D2 419 aa29.11■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms