RNA–Protein interactions for RNA: ENST00000591880.2

GFAP-220, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 1,103 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-220ENST00000591880 NISCHQ9Y2I1 1504 aa27.2■■□□□ 1.94
GFAP-220ENST00000591880 CCDC180Q9P1Z9 1646 aa24.33■■□□□ 1.49
GFAP-220ENST00000591880 ABCC9O60706 1549 aa23.83■■□□□ 1.41
GFAP-220ENST00000591880 RB1CC1Q8TDY2 1594 aa22.96■■□□□ 1.27
GFAP-220ENST00000591880 NACADO15069 1562 aa22.89■■□□□ 1.26
GFAP-220ENST00000591880 MYO15BQ96JP2 1530 aa22.75■■□□□ 1.23
GFAP-220ENST00000591880 DCAF8L2P0C7V8 631 aa22.66■■□□□ 1.22
GFAP-220ENST00000591880 ZCCHC6Q5VYS8 1495 aaKnown RBP22.66■■□□□ 1.22
GFAP-220ENST00000591880 DCAF1Q9Y4B6 1507 aa22.57■■□□□ 1.2
GFAP-220ENST00000591880 UNC13AQ9UPW8 1703 aa22.34■■□□□ 1.17
GFAP-220ENST00000591880 BICRAQ9NZM4 1560 aa22.17■■□□□ 1.14
GFAP-220ENST00000591880 PABPN1Q86U42 306 aaKnown RBP eCLIP22.17■■□□□ 1.14
GFAP-220ENST00000591880 SHROOM4Q9ULL8 1493 aa22.13■■□□□ 1.13
GFAP-220ENST00000591880 SCRIBQ14160 1630 aa22.09■■□□□ 1.13
GFAP-220ENST00000591880 DNAJC5BQ9UF47 199 aa21.89■■□□□ 1.09
GFAP-220ENST00000591880 EIF4G1Q04637 1599 aaKnown RBP21.65■■□□□ 1.06
GFAP-220ENST00000591880 CC2D2AQ9P2K1 1620 aa21.58■■□□□ 1.05
GFAP-220ENST00000591880 CECR2Q9BXF3 1484 aa21.47■■□□□ 1.03
GFAP-220ENST00000591880 SMARCA4P51532 1647 aa21.15■□□□□ 0.98
GFAP-220ENST00000591880 BAZ1AQ9NRL2 1556 aaPredicted RBP21.14■□□□□ 0.98
GFAP-220ENST00000591880 NCAPD3P42695 1498 aa21.09■□□□□ 0.97
GFAP-220ENST00000591880 SMARCA2P51531 1590 aa21.08■□□□□ 0.97
GFAP-220ENST00000591880 ATAD2BQ9ULI0 1458 aa21.06■□□□□ 0.96
GFAP-220ENST00000591880 HMGXB3Q12766 1538 aa21.03■□□□□ 0.96
GFAP-220ENST00000591880 PEG3Q9GZU2 1588 aa20.98■□□□□ 0.95
GFAP-220ENST00000591880 MROH2BQ7Z745 1585 aa20.91■□□□□ 0.94
GFAP-220ENST00000591880 BAZ1BQ9UIG0 1483 aaKnown RBP20.91■□□□□ 0.94
GFAP-220ENST00000591880 WIZO95785 1651 aa20.67■□□□□ 0.9
GFAP-220ENST00000591880 ERCC6Q03468 1493 aa20.62■□□□□ 0.89
GFAP-220ENST00000591880 RSF1Q96T23 1441 aaPredicted RBP20.61■□□□□ 0.89
GFAP-220ENST00000591880 LAMC3Q9Y6N6 1575 aa20.6■□□□□ 0.89
GFAP-220ENST00000591880 NESP48681 1621 aa20.54■□□□□ 0.88
GFAP-220ENST00000591880 TOP2AP11388 1531 aaKnown RBP20.53■□□□□ 0.88
GFAP-220ENST00000591880 CUX2O14529 1486 aa20.51■□□□□ 0.87
GFAP-220ENST00000591880 PDS5BQ9NTI5 1447 aa20.46■□□□□ 0.87
GFAP-220ENST00000591880 CADPSQ9ULU8 1353 aa20.46■□□□□ 0.87
GFAP-220ENST00000591880 THOC2Q8NI27 1593 aaKnown RBP20.36■□□□□ 0.85
GFAP-220ENST00000591880 KIF21AQ7Z4S6 1674 aa20.34■□□□□ 0.85
GFAP-220ENST00000591880 CFTRP13569 1480 aa20.31■□□□□ 0.84
GFAP-220ENST00000591880 CEP164Q9UPV0 1460 aa20.25■□□□□ 0.83
GFAP-220ENST00000591880 MRC2Q9UBG0 1479 aa20.24■□□□□ 0.83
GFAP-220ENST00000591880 FANCD2Q9BXW9 1451 aa20.23■□□□□ 0.83
GFAP-220ENST00000591880 CCDC88BA6NC98 1476 aa20.21■□□□□ 0.83
GFAP-220ENST00000591880 WDR62O43379 1518 aa20.19■□□□□ 0.82
GFAP-220ENST00000591880 PRDM2Q13029 1718 aa20.18■□□□□ 0.82
GFAP-220ENST00000591880 URB2Q14146 1524 aaKnown RBP20■□□□□ 0.79
GFAP-220ENST00000591880 DNAJC5Q9H3Z4 198 aa19.94■□□□□ 0.78
GFAP-220ENST00000591880 ABCC8Q09428 1581 aa19.94■□□□□ 0.78
GFAP-220ENST00000591880 SUPT5HO00267 1087 aaKnown RBP19.89■□□□□ 0.77
GFAP-220ENST00000591880 DNMBPQ6XZF7 1577 aa19.87■□□□□ 0.77
GFAP-220ENST00000591880 TOPBP1Q92547 1522 aa19.87■□□□□ 0.77
GFAP-220ENST00000591880 IFT140Q96RY7 1462 aa19.84■□□□□ 0.77
GFAP-220ENST00000591880 POLA1P09884 1462 aaPredicted RBP19.7■□□□□ 0.74
GFAP-220ENST00000591880 ZNF608Q9ULD9 1512 aaPredicted RBP19.66■□□□□ 0.74
GFAP-220ENST00000591880 EIF4G3O43432 1585 aaKnown RBP19.66■□□□□ 0.74
GFAP-220ENST00000591880 TARBP1Q13395 1621 aaKnown RBP19.65■□□□□ 0.74
GFAP-220ENST00000591880 CUX1P39880 1505 aa19.64■□□□□ 0.73
GFAP-220ENST00000591880 WDR97A6NE52 1622 aa19.64■□□□□ 0.73
GFAP-220ENST00000591880 FGD5Q6ZNL6 1462 aa19.62■□□□□ 0.73
GFAP-220ENST00000591880 SOGA1O94964 1423 aa19.59■□□□□ 0.73
GFAP-220ENST00000591880 RAD54L2Q9Y4B4 1467 aa19.55■□□□□ 0.72
GFAP-220ENST00000591880 OSCARQ8IYS5 282 aa19.54■□□□□ 0.72
GFAP-220ENST00000591880 AQRO60306 1485 aaKnown RBP eCLIP19.53■□□□□ 0.72
GFAP-220ENST00000591880 WRNQ14191 1432 aaPredicted RBP eCLIP19.5■□□□□ 0.71
GFAP-220ENST00000591880 TOP2BQ02880 1626 aa19.48■□□□□ 0.71
GFAP-220ENST00000591880 BIVM-ERCC5R4GMW8 1640 aa19.48■□□□□ 0.71
GFAP-220ENST00000591880 ABCA10Q8WWZ4 1543 aa19.46■□□□□ 0.71
GFAP-220ENST00000591880 TDRD9Q8NDG6 1382 aaKnown RBP19.45■□□□□ 0.7
GFAP-220ENST00000591880 GRIN2BQ13224 1484 aa19.43■□□□□ 0.7
GFAP-220ENST00000591880 MAGI1Q96QZ7 1491 aaPredicted RBP19.43■□□□□ 0.7
GFAP-220ENST00000591880 SYNJ1O43426 1573 aa19.42■□□□□ 0.7
GFAP-220ENST00000591880 SNAPC4Q5SXM2 1469 aa19.41■□□□□ 0.7
GFAP-220ENST00000591880 ABCA5Q8WWZ7 1642 aa19.4■□□□□ 0.7
GFAP-220ENST00000591880 CHD1O14646 1710 aa19.39■□□□□ 0.7
GFAP-220ENST00000591880 GAPVD1Q14C86 1478 aa19.39■□□□□ 0.69
GFAP-220ENST00000591880 PBRM1Q86U86 1689 aa19.37■□□□□ 0.69
GFAP-220ENST00000591880 SYNJ2O15056 1496 aa19.33■□□□□ 0.68
GFAP-220ENST00000591880 FBLN2P98095 1184 aa19.32■□□□□ 0.68
GFAP-220ENST00000591880 CHMP7Q8WUX9 453 aaPredicted RBP19.29■□□□□ 0.68
GFAP-220ENST00000591880 ARHGEF11O15085 1522 aa19.25■□□□□ 0.67
GFAP-220ENST00000591880 RIMBP3CA6NJZ7 1639 aa19.25■□□□□ 0.67
GFAP-220ENST00000591880 RIMBP3BA6NNM3 1639 aa19.25■□□□□ 0.67
GFAP-220ENST00000591880 RIMBP3Q9UFD9 1639 aa19.25■□□□□ 0.67
GFAP-220ENST00000591880 ERICH3Q5RHP9 1530 aa19.25■□□□□ 0.67
GFAP-220ENST00000591880 ADAMTS12P58397 1594 aa19.23■□□□□ 0.67
GFAP-220ENST00000591880 CLASP1Q7Z460 1538 aa19.22■□□□□ 0.67
GFAP-220ENST00000591880 TRIM41Q8WV44 630 aa19.19■□□□□ 0.66
GFAP-220ENST00000591880 FHAD1B1AJZ9 1412 aa19.18■□□□□ 0.66
GFAP-220ENST00000591880 GRIN2AQ12879 1464 aa19.17■□□□□ 0.66
GFAP-220ENST00000591880 KIF27Q86VH2 1401 aa19.12■□□□□ 0.65
GFAP-220ENST00000591880 NUP160Q12769 1436 aa19.1■□□□□ 0.65
GFAP-220ENST00000591880 ARAP1Q96P48 1450 aa19.08■□□□□ 0.64
GFAP-220ENST00000591880 CUL7Q14999 1698 aa19.06■□□□□ 0.64
GFAP-220ENST00000591880 CEP170Q5SW79 1584 aa19.06■□□□□ 0.64
GFAP-220ENST00000591880 CYB5RLQ6IPT4 315 aa19■□□□□ 0.63
GFAP-220ENST00000591880 IGF1RP08069 1367 aa18.98■□□□□ 0.63
GFAP-220ENST00000591880 SHROOM2Q13796 1616 aa18.97■□□□□ 0.63
GFAP-220ENST00000591880 RUSC2Q8N2Y8 1516 aa18.95■□□□□ 0.62
GFAP-220ENST00000591880 CARMIL1Q5VZK9 1371 aa18.9■□□□□ 0.62
GFAP-220ENST00000591880 KIAA0586Q9BVV6 1533 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms