RNA–Protein interactions for RNA: ENST00000591856.1

EFTUD2-221, Transcript of elongation factor Tu GTP binding domain containing 2, humanhuman

TSL 3

Gene EFTUD2, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFTUD2-221ENST00000591856 NISCHQ9Y2I1 1504 aa19.75■□□□□ 0.75
EFTUD2-221ENST00000591856 CCDC180Q9P1Z9 1646 aa17.59■□□□□ 0.41
EFTUD2-221ENST00000591856 ABCC9O60706 1549 aa16.8■□□□□ 0.28
EFTUD2-221ENST00000591856 ZCCHC6Q5VYS8 1495 aaKnown RBP16.54■□□□□ 0.24
EFTUD2-221ENST00000591856 MYO15BQ96JP2 1530 aa16.46■□□□□ 0.23
EFTUD2-221ENST00000591856 DCAF1Q9Y4B6 1507 aa16.45■□□□□ 0.22
EFTUD2-221ENST00000591856 NACADO15069 1562 aa16.42■□□□□ 0.22
EFTUD2-221ENST00000591856 RB1CC1Q8TDY2 1594 aa16.37■□□□□ 0.21
EFTUD2-221ENST00000591856 DCAF8L2P0C7V8 631 aa16.08■□□□□ 0.16
EFTUD2-221ENST00000591856 UNC13AQ9UPW8 1703 aa16.06■□□□□ 0.16
EFTUD2-221ENST00000591856 SCRIBQ14160 1630 aa15.91■□□□□ 0.14
EFTUD2-221ENST00000591856 BICRAQ9NZM4 1560 aa15.89■□□□□ 0.13
EFTUD2-221ENST00000591856 SHROOM4Q9ULL8 1493 aa15.84■□□□□ 0.13
EFTUD2-221ENST00000591856 PABPN1Q86U42 306 aaKnown RBP eCLIP15.63■□□□□ 0.09
EFTUD2-221ENST00000591856 EIF4G1Q04637 1599 aaKnown RBP15.43■□□□□ 0.06
EFTUD2-221ENST00000591856 BAZ1AQ9NRL2 1556 aaPredicted RBP15.31■□□□□ 0.04
EFTUD2-221ENST00000591856 SMARCA4P51532 1647 aa15.31■□□□□ 0.04
EFTUD2-221ENST00000591856 CC2D2AQ9P2K1 1620 aa15.29■□□□□ 0.04
EFTUD2-221ENST00000591856 CECR2Q9BXF3 1484 aa15.29■□□□□ 0.04
EFTUD2-221ENST00000591856 PEG3Q9GZU2 1588 aa15.22■□□□□ 0.03
EFTUD2-221ENST00000591856 MROH2BQ7Z745 1585 aa15.19■□□□□ 0.02
EFTUD2-221ENST00000591856 DNAJC5BQ9UF47 199 aa15.19■□□□□ 0.02
EFTUD2-221ENST00000591856 SMARCA2P51531 1590 aa15.17■□□□□ 0.02
EFTUD2-221ENST00000591856 HMGXB3Q12766 1538 aa15.13■□□□□ 0.01
EFTUD2-221ENST00000591856 ATAD2BQ9ULI0 1458 aa15.13■□□□□ 0.01
EFTUD2-221ENST00000591856 NCAPD3P42695 1498 aa15.11■□□□□ 0.01
EFTUD2-221ENST00000591856 RSF1Q96T23 1441 aaPredicted RBP15.07■□□□□ 0
EFTUD2-221ENST00000591856 WIZO95785 1651 aa15.03■□□□□ -0
EFTUD2-221ENST00000591856 BAZ1BQ9UIG0 1483 aaKnown RBP15□□□□□ -0.01
EFTUD2-221ENST00000591856 TOP2AP11388 1531 aaKnown RBP14.95□□□□□ -0.02
EFTUD2-221ENST00000591856 LAMC3Q9Y6N6 1575 aa14.72□□□□□ -0.05
EFTUD2-221ENST00000591856 CCDC88BA6NC98 1476 aa14.68□□□□□ -0.06
EFTUD2-221ENST00000591856 PRDM2Q13029 1718 aa14.66□□□□□ -0.06
EFTUD2-221ENST00000591856 CFTRP13569 1480 aa14.64□□□□□ -0.07
EFTUD2-221ENST00000591856 CADPSQ9ULU8 1353 aa14.63□□□□□ -0.07
EFTUD2-221ENST00000591856 NESP48681 1621 aa14.63□□□□□ -0.07
EFTUD2-221ENST00000591856 SUPT5HO00267 1087 aaKnown RBP14.61□□□□□ -0.07
EFTUD2-221ENST00000591856 KIF21AQ7Z4S6 1674 aa14.55□□□□□ -0.08
EFTUD2-221ENST00000591856 PDS5BQ9NTI5 1447 aa14.52□□□□□ -0.08
EFTUD2-221ENST00000591856 THOC2Q8NI27 1593 aaKnown RBP14.49□□□□□ -0.09
EFTUD2-221ENST00000591856 ERCC6Q03468 1493 aa14.48□□□□□ -0.09
EFTUD2-221ENST00000591856 FANCD2Q9BXW9 1451 aa14.48□□□□□ -0.09
EFTUD2-221ENST00000591856 CEP164Q9UPV0 1460 aa14.46□□□□□ -0.09
EFTUD2-221ENST00000591856 MRC2Q9UBG0 1479 aa14.41□□□□□ -0.1
EFTUD2-221ENST00000591856 WDR62O43379 1518 aa14.41□□□□□ -0.1
EFTUD2-221ENST00000591856 CUX2O14529 1486 aa14.36□□□□□ -0.11
EFTUD2-221ENST00000591856 URB2Q14146 1524 aaKnown RBP14.35□□□□□ -0.11
EFTUD2-221ENST00000591856 DNMBPQ6XZF7 1577 aa14.33□□□□□ -0.12
EFTUD2-221ENST00000591856 ABCC8Q09428 1581 aa14.3□□□□□ -0.12
EFTUD2-221ENST00000591856 TOPBP1Q92547 1522 aa14.29□□□□□ -0.12
EFTUD2-221ENST00000591856 CUX1P39880 1505 aa14.25□□□□□ -0.13
EFTUD2-221ENST00000591856 BIVM-ERCC5R4GMW8 1640 aa14.25□□□□□ -0.13
EFTUD2-221ENST00000591856 TOP2BQ02880 1626 aa14.23□□□□□ -0.13
EFTUD2-221ENST00000591856 SYNJ1O43426 1573 aa14.19□□□□□ -0.14
EFTUD2-221ENST00000591856 WRNQ14191 1432 aaPredicted RBP eCLIP14.19□□□□□ -0.14
EFTUD2-221ENST00000591856 POLA1P09884 1462 aaPredicted RBP14.18□□□□□ -0.14
EFTUD2-221ENST00000591856 TARBP1Q13395 1621 aaKnown RBP14.17□□□□□ -0.14
EFTUD2-221ENST00000591856 WDR97A6NE52 1622 aa14.16□□□□□ -0.14
EFTUD2-221ENST00000591856 FGD5Q6ZNL6 1462 aa14.16□□□□□ -0.14
EFTUD2-221ENST00000591856 IFT140Q96RY7 1462 aa14.15□□□□□ -0.14
EFTUD2-221ENST00000591856 ABCA10Q8WWZ4 1543 aa14.07□□□□□ -0.16
EFTUD2-221ENST00000591856 EIF4G3O43432 1585 aaKnown RBP14.07□□□□□ -0.16
EFTUD2-221ENST00000591856 ABCA5Q8WWZ7 1642 aa14.04□□□□□ -0.16
EFTUD2-221ENST00000591856 SOGA1O94964 1423 aa14.04□□□□□ -0.16
EFTUD2-221ENST00000591856 RAD54L2Q9Y4B4 1467 aa14.04□□□□□ -0.16
EFTUD2-221ENST00000591856 ZNF608Q9ULD9 1512 aaPredicted RBP14.04□□□□□ -0.16
EFTUD2-221ENST00000591856 PBRM1Q86U86 1689 aa13.98□□□□□ -0.17
EFTUD2-221ENST00000591856 AQRO60306 1485 aaKnown RBP eCLIP13.93□□□□□ -0.184e-6■□□□□ 10.8
EFTUD2-221ENST00000591856 GAPVD1Q14C86 1478 aa13.93□□□□□ -0.18
EFTUD2-221ENST00000591856 GRIN2BQ13224 1484 aa13.93□□□□□ -0.18
EFTUD2-221ENST00000591856 ERICH3Q5RHP9 1530 aa13.92□□□□□ -0.18
EFTUD2-221ENST00000591856 TDRD9Q8NDG6 1382 aaKnown RBP13.92□□□□□ -0.18
EFTUD2-221ENST00000591856 MAGI1Q96QZ7 1491 aaPredicted RBP13.91□□□□□ -0.18
EFTUD2-221ENST00000591856 ADAMTS12P58397 1594 aa13.88□□□□□ -0.19
EFTUD2-221ENST00000591856 KIF27Q86VH2 1401 aa13.88□□□□□ -0.19
EFTUD2-221ENST00000591856 SNAPC4Q5SXM2 1469 aa13.87□□□□□ -0.19
EFTUD2-221ENST00000591856 CHD1O14646 1710 aa13.85□□□□□ -0.19
EFTUD2-221ENST00000591856 CUL7Q14999 1698 aa13.85□□□□□ -0.19
EFTUD2-221ENST00000591856 SYNJ2O15056 1496 aa13.83□□□□□ -0.2
EFTUD2-221ENST00000591856 CHIC1Q5VXU3 224 aa13.83□□□□□ -0.2
EFTUD2-221ENST00000591856 TRIM41Q8WV44 630 aa13.83□□□□□ -0.2
EFTUD2-221ENST00000591856 FHAD1B1AJZ9 1412 aa13.79□□□□□ -0.2
EFTUD2-221ENST00000591856 EEA1Q15075 1411 aa13.78□□□□□ -0.2
EFTUD2-221ENST00000591856 IGF1RP08069 1367 aa13.77□□□□□ -0.21
EFTUD2-221ENST00000591856 GRIN2AQ12879 1464 aa13.76□□□□□ -0.21
EFTUD2-221ENST00000591856 RUSC2Q8N2Y8 1516 aa13.75□□□□□ -0.21
EFTUD2-221ENST00000591856 CLASP1Q7Z460 1538 aa13.72□□□□□ -0.21
EFTUD2-221ENST00000591856 NUP160Q12769 1436 aa13.72□□□□□ -0.21
EFTUD2-221ENST00000591856 PRXQ9BXM0 1461 aa13.71□□□□□ -0.21
EFTUD2-221ENST00000591856 CEP170Q5SW79 1584 aa13.7□□□□□ -0.22
EFTUD2-221ENST00000591856 CARMIL1Q5VZK9 1371 aa13.68□□□□□ -0.22
EFTUD2-221ENST00000591856 KIF21BO75037 1637 aa13.67□□□□□ -0.22
EFTUD2-221ENST00000591856 RAPGEF2Q9Y4G8 1499 aa13.67□□□□□ -0.22
EFTUD2-221ENST00000591856 SHROOM2Q13796 1616 aa13.65□□□□□ -0.22
EFTUD2-221ENST00000591856 CHMP7Q8WUX9 453 aaPredicted RBP13.65□□□□□ -0.22
EFTUD2-221ENST00000591856 OSCARQ8IYS5 282 aa13.64□□□□□ -0.23
EFTUD2-221ENST00000591856 CTTNBP2Q8WZ74 1663 aa13.63□□□□□ -0.23
EFTUD2-221ENST00000591856 KIAA0586Q9BVV6 1533 aa13.6□□□□□ -0.23
EFTUD2-221ENST00000591856 FBLN2P98095 1184 aa13.59□□□□□ -0.23
EFTUD2-221ENST00000591856 CSRNP3Q8WYN3 585 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms