RNA–Protein interactions for RNA: ENST00000591687.2

PCSK4-212, Transcript of proprotein convertase subtilisin/kexin type 4, humanhuman

TSL 5

Gene PCSK4, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK4-212ENST00000591687 NISCHQ9Y2I1 1504 aa38.53■■■■□ 3.76
PCSK4-212ENST00000591687 ABCC9O60706 1549 aa34.74■■■■□ 3.15
PCSK4-212ENST00000591687 CCDC180Q9P1Z9 1646 aa34.56■■■■□ 3.12
PCSK4-212ENST00000591687 RB1CC1Q8TDY2 1594 aa32.92■■■□□ 2.86
PCSK4-212ENST00000591687 DCAF8L2P0C7V8 631 aa32.65■■■□□ 2.82
PCSK4-212ENST00000591687 NACADO15069 1562 aa32.64■■■□□ 2.82
PCSK4-212ENST00000591687 DNAJC5BQ9UF47 199 aa32.59■■■□□ 2.81
PCSK4-212ENST00000591687 PABPN1Q86U42 306 aaKnown RBP eCLIP32.35■■■□□ 2.77
PCSK4-212ENST00000591687 UNC13AQ9UPW8 1703 aa32.32■■■□□ 2.76
PCSK4-212ENST00000591687 MYO15BQ96JP2 1530 aa32.09■■■□□ 2.73
PCSK4-212ENST00000591687 BICRAQ9NZM4 1560 aa32.03■■■□□ 2.72
PCSK4-212ENST00000591687 ZCCHC6Q5VYS8 1495 aaKnown RBP31.95■■■□□ 2.7
PCSK4-212ENST00000591687 DCAF1Q9Y4B6 1507 aa31.71■■■□□ 2.67
PCSK4-212ENST00000591687 SCRIBQ14160 1630 aa31.67■■■□□ 2.66
PCSK4-212ENST00000591687 SHROOM4Q9ULL8 1493 aa31.39■■■□□ 2.62
PCSK4-212ENST00000591687 CC2D2AQ9P2K1 1620 aa31.34■■■□□ 2.61
PCSK4-212ENST00000591687 EIF4G1Q04637 1599 aaKnown RBP31.23■■■□□ 2.59
PCSK4-212ENST00000591687 CECR2Q9BXF3 1484 aa31.22■■■□□ 2.59
PCSK4-212ENST00000591687 NCAPD3P42695 1498 aa30.12■■■□□ 2.41
PCSK4-212ENST00000591687 SMARCA4P51532 1647 aa30.11■■■□□ 2.41
PCSK4-212ENST00000591687 ATAD2BQ9ULI0 1458 aa30.11■■■□□ 2.41
PCSK4-212ENST00000591687 SMARCA2P51531 1590 aa29.98■■■□□ 2.39
PCSK4-212ENST00000591687 HMGXB3Q12766 1538 aa29.94■■■□□ 2.38
PCSK4-212ENST00000591687 ERCC6Q03468 1493 aa29.93■■■□□ 2.38
PCSK4-212ENST00000591687 BAZ1AQ9NRL2 1556 aaPredicted RBP29.9■■■□□ 2.38
PCSK4-212ENST00000591687 NESP48681 1621 aa29.85■■■□□ 2.37
PCSK4-212ENST00000591687 BAZ1BQ9UIG0 1483 aaKnown RBP29.84■■■□□ 2.37
PCSK4-212ENST00000591687 DNAJC5Q9H3Z4 198 aa29.8■■■□□ 2.36
PCSK4-212ENST00000591687 CUX2O14529 1486 aa29.79■■■□□ 2.36
PCSK4-212ENST00000591687 MROH2BQ7Z745 1585 aa29.77■■■□□ 2.36
PCSK4-212ENST00000591687 PEG3Q9GZU2 1588 aa29.72■■■□□ 2.35
PCSK4-212ENST00000591687 THOC2Q8NI27 1593 aaKnown RBP29.51■■■□□ 2.31
PCSK4-212ENST00000591687 LAMC3Q9Y6N6 1575 aa29.48■■■□□ 2.31
PCSK4-212ENST00000591687 KIF21AQ7Z4S6 1674 aa29.47■■■□□ 2.31
PCSK4-212ENST00000591687 WIZO95785 1651 aa29.46■■■□□ 2.31
PCSK4-212ENST00000591687 PDS5BQ9NTI5 1447 aa29.29■■■□□ 2.28
PCSK4-212ENST00000591687 CADPSQ9ULU8 1353 aa29.24■■■□□ 2.27
PCSK4-212ENST00000591687 MRC2Q9UBG0 1479 aa29.11■■■□□ 2.25
PCSK4-212ENST00000591687 RSF1Q96T23 1441 aaPredicted RBP29.09■■■□□ 2.25
PCSK4-212ENST00000591687 WDR62O43379 1518 aa29.04■■■□□ 2.24
PCSK4-212ENST00000591687 CEP164Q9UPV0 1460 aa29■■■□□ 2.23
PCSK4-212ENST00000591687 TOP2AP11388 1531 aaKnown RBP28.99■■■□□ 2.23
PCSK4-212ENST00000591687 FANCD2Q9BXW9 1451 aa28.97■■■□□ 2.23
PCSK4-212ENST00000591687 CFTRP13569 1480 aa28.91■■■□□ 2.22
PCSK4-212ENST00000591687 URB2Q14146 1524 aaKnown RBP28.78■■■□□ 2.2
PCSK4-212ENST00000591687 PRDM2Q13029 1718 aa28.69■■■□□ 2.18
PCSK4-212ENST00000591687 CCDC88BA6NC98 1476 aa28.68■■■□□ 2.18
PCSK4-212ENST00000591687 TRIM41Q8WV44 630 aa28.67■■■□□ 2.18
PCSK4-212ENST00000591687 ZNF608Q9ULD9 1512 aaPredicted RBP28.46■■■□□ 2.15
PCSK4-212ENST00000591687 TOPBP1Q92547 1522 aa28.43■■■□□ 2.14
PCSK4-212ENST00000591687 OSCARQ8IYS5 282 aa28.42■■■□□ 2.14
PCSK4-212ENST00000591687 IFT140Q96RY7 1462 aa28.37■■■□□ 2.13
PCSK4-212ENST00000591687 DNMBPQ6XZF7 1577 aa28.31■■■□□ 2.12
PCSK4-212ENST00000591687 EIF4G3O43432 1585 aaKnown RBP28.28■■■□□ 2.12
PCSK4-212ENST00000591687 ABCC8Q09428 1581 aa28.21■■■□□ 2.11
PCSK4-212ENST00000591687 RIMBP3CA6NJZ7 1639 aa28.19■■■□□ 2.1
PCSK4-212ENST00000591687 RIMBP3BA6NNM3 1639 aa28.19■■■□□ 2.1
PCSK4-212ENST00000591687 RIMBP3Q9UFD9 1639 aa28.19■■■□□ 2.1
PCSK4-212ENST00000591687 TARBP1Q13395 1621 aaKnown RBP28.18■■■□□ 2.1
PCSK4-212ENST00000591687 AQRO60306 1485 aaKnown RBP eCLIP28.17■■■□□ 2.1
PCSK4-212ENST00000591687 POLA1P09884 1462 aaPredicted RBP28.15■■■□□ 2.1
PCSK4-212ENST00000591687 CHD1O14646 1710 aa28.12■■■□□ 2.09
PCSK4-212ENST00000591687 RAD54L2Q9Y4B4 1467 aa28.1■■■□□ 2.09
PCSK4-212ENST00000591687 ARHGEF11O15085 1522 aa28.07■■■□□ 2.08
PCSK4-212ENST00000591687 FBLN2P98095 1184 aa28■■■□□ 2.07
PCSK4-212ENST00000591687 FGD5Q6ZNL6 1462 aa27.99■■■□□ 2.07
PCSK4-212ENST00000591687 TDRD9Q8NDG6 1382 aaKnown RBP27.99■■■□□ 2.07
PCSK4-212ENST00000591687 SOGA1O94964 1423 aa27.98■■■□□ 2.07
PCSK4-212ENST00000591687 CUX1P39880 1505 aa27.97■■■□□ 2.07
PCSK4-212ENST00000591687 SUPT5HO00267 1087 aaKnown RBP27.9■■■□□ 2.06
PCSK4-212ENST00000591687 SNAPC4Q5SXM2 1469 aa27.89■■■□□ 2.05
PCSK4-212ENST00000591687 CYB5RLQ6IPT4 315 aa27.86■■■□□ 2.05
PCSK4-212ENST00000591687 ARAP1Q96P48 1450 aa27.81■■■□□ 2.04
PCSK4-212ENST00000591687 WDR97A6NE52 1622 aa27.79■■■□□ 2.04
PCSK4-212ENST00000591687 PBRM1Q86U86 1689 aa27.72■■■□□ 2.03
PCSK4-212ENST00000591687 GRIN2BQ13224 1484 aa27.72■■■□□ 2.03
PCSK4-212ENST00000591687 CLASP1Q7Z460 1538 aa27.71■■■□□ 2.03
PCSK4-212ENST00000591687 MAGI1Q96QZ7 1491 aaPredicted RBP27.7■■■□□ 2.03
PCSK4-212ENST00000591687 CHMP7Q8WUX9 453 aaPredicted RBP27.7■■■□□ 2.02
PCSK4-212ENST00000591687 SYNJ1O43426 1573 aa27.66■■■□□ 2.02
PCSK4-212ENST00000591687 GAPVD1Q14C86 1478 aa27.65■■■□□ 2.02
PCSK4-212ENST00000591687 SYNJ2O15056 1496 aa27.64■■■□□ 2.01
PCSK4-212ENST00000591687 ABCA5Q8WWZ7 1642 aa27.62■■■□□ 2.01
PCSK4-212ENST00000591687 ABCA10Q8WWZ4 1543 aa27.6■■■□□ 2.01
PCSK4-212ENST00000591687 TRHP20396 242 aaPredicted RBP27.57■■■□□ 2
PCSK4-212ENST00000591687 BIVM-ERCC5R4GMW8 1640 aa27.48■■□□□ 1.99
PCSK4-212ENST00000591687 TOP2BQ02880 1626 aa27.46■■□□□ 1.99
PCSK4-212ENST00000591687 WRNQ14191 1432 aaPredicted RBP eCLIP27.46■■□□□ 1.99
PCSK4-212ENST00000591687 ADAMTS12P58397 1594 aa27.43■■□□□ 1.98
PCSK4-212ENST00000591687 GRIN2AQ12879 1464 aa27.4■■□□□ 1.98
PCSK4-212ENST00000591687 ERCC6L2Q5T890 1561 aa27.39■■□□□ 1.98
PCSK4-212ENST00000591687 CEP170Q5SW79 1584 aa27.37■■□□□ 1.97
PCSK4-212ENST00000591687 NUP160Q12769 1436 aa27.27■■□□□ 1.96
PCSK4-212ENST00000591687 FHAD1B1AJZ9 1412 aa27.26■■□□□ 1.95
PCSK4-212ENST00000591687 ERICH3Q5RHP9 1530 aa27.22■■□□□ 1.95
PCSK4-212ENST00000591687 SHROOM2Q13796 1616 aa27.18■■□□□ 1.94
PCSK4-212ENST00000591687 PRG4Q92954 1404 aaPredicted RBP27.06■■□□□ 1.92
PCSK4-212ENST00000591687 RUSC2Q8N2Y8 1516 aa27.05■■□□□ 1.92
PCSK4-212ENST00000591687 JPH4Q96JJ6 628 aa26.98■■□□□ 1.91
PCSK4-212ENST00000591687 IGF1RP08069 1367 aa26.89■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 527.9 ms