RNA–Protein interactions for RNA: ENST00000591678.1

APBA3-207, Transcript of amyloid beta precursor protein binding family A member 3, humanhuman

TSL 1 (best)

Gene APBA3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBA3-207ENST00000591678 NISCHQ9Y2I1 1504 aa25.12■■□□□ 1.61
APBA3-207ENST00000591678 ABCC9O60706 1549 aa23.18■■□□□ 1.3
APBA3-207ENST00000591678 CCDC180Q9P1Z9 1646 aa22.7■■□□□ 1.22
APBA3-207ENST00000591678 DNAJC5BQ9UF47 199 aa22.13■■□□□ 1.13
APBA3-207ENST00000591678 RB1CC1Q8TDY2 1594 aa21.78■■□□□ 1.08
APBA3-207ENST00000591678 PABPN1Q86U42 306 aaKnown RBP eCLIP21.53■■□□□ 1.04
APBA3-207ENST00000591678 NACADO15069 1562 aa21.52■■□□□ 1.04
APBA3-207ENST00000591678 UNC13AQ9UPW8 1703 aa21.49■■□□□ 1.03
APBA3-207ENST00000591678 DCAF8L2P0C7V8 631 aa21.47■■□□□ 1.03
APBA3-207ENST00000591678 BICRAQ9NZM4 1560 aa21.26■□□□□ 0.99
APBA3-207ENST00000591678 MYO15BQ96JP2 1530 aa21.01■□□□□ 0.95
APBA3-207ENST00000591678 CC2D2AQ9P2K1 1620 aa20.9■□□□□ 0.94
APBA3-207ENST00000591678 CECR2Q9BXF3 1484 aa20.86■□□□□ 0.93
APBA3-207ENST00000591678 SCRIBQ14160 1630 aa20.76■□□□□ 0.91
APBA3-207ENST00000591678 ZCCHC6Q5VYS8 1495 aaKnown RBP20.73■□□□□ 0.91
APBA3-207ENST00000591678 EIF4G1Q04637 1599 aaKnown RBP20.72■□□□□ 0.91
APBA3-207ENST00000591678 SHROOM4Q9ULL8 1493 aa20.7■□□□□ 0.9
APBA3-207ENST00000591678 DCAF1Q9Y4B6 1507 aa20.63■□□□□ 0.89
APBA3-207ENST00000591678 DNAJC5Q9H3Z4 198 aa20.48■□□□□ 0.87
APBA3-207ENST00000591678 CUX2O14529 1486 aa19.99■□□□□ 0.79
APBA3-207ENST00000591678 ERCC6Q03468 1493 aa19.96■□□□□ 0.79
APBA3-207ENST00000591678 NCAPD3P42695 1498 aa19.87■□□□□ 0.77
APBA3-207ENST00000591678 NESP48681 1621 aa19.83■□□□□ 0.76
APBA3-207ENST00000591678 ATAD2BQ9ULI0 1458 aa19.8■□□□□ 0.76
APBA3-207ENST00000591678 SMARCA4P51532 1647 aa19.72■□□□□ 0.75
APBA3-207ENST00000591678 HMGXB3Q12766 1538 aa19.69■□□□□ 0.74
APBA3-207ENST00000591678 SMARCA2P51531 1590 aa19.68■□□□□ 0.74
APBA3-207ENST00000591678 THOC2Q8NI27 1593 aaKnown RBP19.66■□□□□ 0.74
APBA3-207ENST00000591678 KIF21AQ7Z4S6 1674 aa19.59■□□□□ 0.73
APBA3-207ENST00000591678 BAZ1BQ9UIG0 1483 aaKnown RBP19.58■□□□□ 0.72
APBA3-207ENST00000591678 TRIM41Q8WV44 630 aa19.52■□□□□ 0.72
APBA3-207ENST00000591678 BAZ1AQ9NRL2 1556 aaPredicted RBP19.49■□□□□ 0.71
APBA3-207ENST00000591678 LAMC3Q9Y6N6 1575 aa19.49■□□□□ 0.71
APBA3-207ENST00000591678 PEG3Q9GZU2 1588 aa19.46■□□□□ 0.71
APBA3-207ENST00000591678 MROH2BQ7Z745 1585 aa19.42■□□□□ 0.7
APBA3-207ENST00000591678 PDS5BQ9NTI5 1447 aa19.36■□□□□ 0.69
APBA3-207ENST00000591678 MRC2Q9UBG0 1479 aa19.27■□□□□ 0.67
APBA3-207ENST00000591678 CADPSQ9ULU8 1353 aa19.26■□□□□ 0.67
APBA3-207ENST00000591678 WDR62O43379 1518 aa19.25■□□□□ 0.67
APBA3-207ENST00000591678 WIZO95785 1651 aa19.22■□□□□ 0.67
APBA3-207ENST00000591678 CEP164Q9UPV0 1460 aa19.11■□□□□ 0.65
APBA3-207ENST00000591678 FANCD2Q9BXW9 1451 aa19.08■□□□□ 0.64
APBA3-207ENST00000591678 OSCARQ8IYS5 282 aa19.04■□□□□ 0.64
APBA3-207ENST00000591678 URB2Q14146 1524 aaKnown RBP18.99■□□□□ 0.63
APBA3-207ENST00000591678 CFTRP13569 1480 aa18.97■□□□□ 0.63
APBA3-207ENST00000591678 RIMBP3CA6NJZ7 1639 aa18.94■□□□□ 0.62
APBA3-207ENST00000591678 RIMBP3BA6NNM3 1639 aa18.94■□□□□ 0.62
APBA3-207ENST00000591678 RIMBP3Q9UFD9 1639 aa18.94■□□□□ 0.62
APBA3-207ENST00000591678 PRDM2Q13029 1718 aa18.85■□□□□ 0.61
APBA3-207ENST00000591678 ZNF608Q9ULD9 1512 aaPredicted RBP18.84■□□□□ 0.61
APBA3-207ENST00000591678 TOP2AP11388 1531 aaKnown RBP18.84■□□□□ 0.61
APBA3-207ENST00000591678 RSF1Q96T23 1441 aaPredicted RBP18.83■□□□□ 0.6
APBA3-207ENST00000591678 ARHGEF11O15085 1522 aa18.79■□□□□ 0.6
APBA3-207ENST00000591678 IFT140Q96RY7 1462 aa18.71■□□□□ 0.59
APBA3-207ENST00000591678 CYB5RLQ6IPT4 315 aa18.71■□□□□ 0.59
APBA3-207ENST00000591678 CHD1O14646 1710 aa18.7■□□□□ 0.58
APBA3-207ENST00000591678 TOPBP1Q92547 1522 aa18.69■□□□□ 0.58
APBA3-207ENST00000591678 EIF4G3O43432 1585 aaKnown RBP18.69■□□□□ 0.58
APBA3-207ENST00000591678 CCDC88BA6NC98 1476 aa18.66■□□□□ 0.58
APBA3-207ENST00000591678 AQRO60306 1485 aaKnown RBP eCLIP18.61■□□□□ 0.57
APBA3-207ENST00000591678 TRHP20396 242 aaPredicted RBP18.61■□□□□ 0.57
APBA3-207ENST00000591678 ARAP1Q96P48 1450 aa18.6■□□□□ 0.57
APBA3-207ENST00000591678 TARBP1Q13395 1621 aaKnown RBP18.58■□□□□ 0.56
APBA3-207ENST00000591678 DNMBPQ6XZF7 1577 aa18.57■□□□□ 0.56
APBA3-207ENST00000591678 FBLN2P98095 1184 aa18.56■□□□□ 0.56
APBA3-207ENST00000591678 ABCC8Q09428 1581 aa18.51■□□□□ 0.55
APBA3-207ENST00000591678 POLA1P09884 1462 aaPredicted RBP18.47■□□□□ 0.55
APBA3-207ENST00000591678 RAD54L2Q9Y4B4 1467 aa18.47■□□□□ 0.55
APBA3-207ENST00000591678 TDRD9Q8NDG6 1382 aaKnown RBP18.42■□□□□ 0.54
APBA3-207ENST00000591678 SNAPC4Q5SXM2 1469 aa18.38■□□□□ 0.53
APBA3-207ENST00000591678 CLASP1Q7Z460 1538 aa18.38■□□□□ 0.53
APBA3-207ENST00000591678 SOGA1O94964 1423 aa18.36■□□□□ 0.53
APBA3-207ENST00000591678 FGD5Q6ZNL6 1462 aa18.32■□□□□ 0.52
APBA3-207ENST00000591678 AEBP2Q6ZN18 517 aaPredicted RBP18.31■□□□□ 0.52
APBA3-207ENST00000591678 SYNJ1O43426 1573 aa18.3■□□□□ 0.52
APBA3-207ENST00000591678 CHMP7Q8WUX9 453 aaPredicted RBP18.29■□□□□ 0.52
APBA3-207ENST00000591678 CUX1P39880 1505 aa18.26■□□□□ 0.51
APBA3-207ENST00000591678 PBRM1Q86U86 1689 aa18.24■□□□□ 0.51
APBA3-207ENST00000591678 WDR97A6NE52 1622 aa18.23■□□□□ 0.51
APBA3-207ENST00000591678 MAGI1Q96QZ7 1491 aaPredicted RBP18.23■□□□□ 0.51
APBA3-207ENST00000591678 SYNJ2O15056 1496 aa18.21■□□□□ 0.51
APBA3-207ENST00000591678 GRIN2BQ13224 1484 aa18.21■□□□□ 0.51
APBA3-207ENST00000591678 GAPVD1Q14C86 1478 aa18.2■□□□□ 0.5
APBA3-207ENST00000591678 ERCC6L2Q5T890 1561 aa18.17■□□□□ 0.5
APBA3-207ENST00000591678 ABCA5Q8WWZ7 1642 aa18.09■□□□□ 0.49
APBA3-207ENST00000591678 KIF13AQ9H1H9 1805 aa18.03■□□□□ 0.48
APBA3-207ENST00000591678 CEP170Q5SW79 1584 aa18.03■□□□□ 0.48
APBA3-207ENST00000591678 ABCA10Q8WWZ4 1543 aa18.03■□□□□ 0.48
APBA3-207ENST00000591678 GRIN2AQ12879 1464 aa18.01■□□□□ 0.47
APBA3-207ENST00000591678 ADAMTS12P58397 1594 aa17.98■□□□□ 0.47
APBA3-207ENST00000591678 SHROOM2Q13796 1616 aa17.95■□□□□ 0.46
APBA3-207ENST00000591678 NUP160Q12769 1436 aa17.95■□□□□ 0.46
APBA3-207ENST00000591678 WRNQ14191 1432 aaPredicted RBP eCLIP17.86■□□□□ 0.45
APBA3-207ENST00000591678 BIVM-ERCC5R4GMW8 1640 aa17.85■□□□□ 0.45
APBA3-207ENST00000591678 FHAD1B1AJZ9 1412 aa17.84■□□□□ 0.45
APBA3-207ENST00000591678 PRG4Q92954 1404 aaPredicted RBP17.83■□□□□ 0.45
APBA3-207ENST00000591678 TOP2BQ02880 1626 aa17.82■□□□□ 0.44
APBA3-207ENST00000591678 SUPT5HO00267 1087 aaKnown RBP17.79■□□□□ 0.44
APBA3-207ENST00000591678 FAM69CQ0P6D2 419 aa17.79■□□□□ 0.44
APBA3-207ENST00000591678 TSPOAP1O95153 1857 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms