RNA–Protein interactions for RNA: ENST00000591648.1

TPGS2-216, Transcript of tubulin polyglutamylase complex subunit 2, humanhuman

TSL 2

Gene TPGS2, Length 790 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS2-216ENST00000591648 NISCHQ9Y2I1 1504 aa63.63■■■■■ 7.78
TPGS2-216ENST00000591648 CCDC180Q9P1Z9 1646 aa56.73■■■■■ 6.67
TPGS2-216ENST00000591648 ABCC9O60706 1549 aa56.4■■■■■ 6.62
TPGS2-216ENST00000591648 RB1CC1Q8TDY2 1594 aa53.78■■■■■ 6.2
TPGS2-216ENST00000591648 DCAF8L2P0C7V8 631 aa53.68■■■■■ 6.18
TPGS2-216ENST00000591648 NACADO15069 1562 aa53.53■■■■■ 6.16
TPGS2-216ENST00000591648 MYO15BQ96JP2 1530 aa52.9■■■■■ 6.06
TPGS2-216ENST00000591648 ZCCHC6Q5VYS8 1495 aaKnown RBP52.86■■■■■ 6.05
TPGS2-216ENST00000591648 PABPN1Q86U42 306 aaKnown RBP eCLIP52.68■■■■■ 6.02
TPGS2-216ENST00000591648 UNC13AQ9UPW8 1703 aa52.59■■■■■ 6.01
TPGS2-216ENST00000591648 DCAF1Q9Y4B6 1507 aa52.48■■■■■ 5.99
TPGS2-216ENST00000591648 DNAJC5BQ9UF47 199 aa52.41■■■■■ 5.98
TPGS2-216ENST00000591648 BICRAQ9NZM4 1560 aa52.25■■■■■ 5.95
TPGS2-216ENST00000591648 SCRIBQ14160 1630 aa51.94■■■■■ 5.91
TPGS2-216ENST00000591648 SHROOM4Q9ULL8 1493 aa51.42■■■■■ 5.82
TPGS2-216ENST00000591648 EIF4G1Q04637 1599 aaKnown RBP50.91■■■■■ 5.74
TPGS2-216ENST00000591648 CC2D2AQ9P2K1 1620 aa50.89■■■■■ 5.74
TPGS2-216ENST00000591648 CECR2Q9BXF3 1484 aa50.68■■■■■ 5.7
TPGS2-216ENST00000591648 SMARCA4P51532 1647 aa49.52■■■■■ 5.52
TPGS2-216ENST00000591648 NCAPD3P42695 1498 aa49.44■■■■■ 5.5
TPGS2-216ENST00000591648 ATAD2BQ9ULI0 1458 aa49.44■■■■■ 5.5
TPGS2-216ENST00000591648 BAZ1AQ9NRL2 1556 aaPredicted RBP49.32■■■■■ 5.49
TPGS2-216ENST00000591648 SMARCA2P51531 1590 aa49.26■■■■■ 5.48
TPGS2-216ENST00000591648 MROH2BQ7Z745 1585 aa49.11■■■■■ 5.45
TPGS2-216ENST00000591648 HMGXB3Q12766 1538 aa49.1■■■■■ 5.45
TPGS2-216ENST00000591648 BAZ1BQ9UIG0 1483 aaKnown RBP48.99■■■■■ 5.43
TPGS2-216ENST00000591648 PEG3Q9GZU2 1588 aa48.94■■■■■ 5.43
TPGS2-216ENST00000591648 NESP48681 1621 aa48.63■■■■■ 5.38
TPGS2-216ENST00000591648 ERCC6Q03468 1493 aa48.61■■■■■ 5.37
TPGS2-216ENST00000591648 WIZO95785 1651 aa48.55■■■■■ 5.36
TPGS2-216ENST00000591648 RSF1Q96T23 1441 aaPredicted RBP48.3■■■■■ 5.32
TPGS2-216ENST00000591648 LAMC3Q9Y6N6 1575 aa48.22■■■■■ 5.31
TPGS2-216ENST00000591648 CUX2O14529 1486 aa48.2■■■■■ 5.31
TPGS2-216ENST00000591648 CADPSQ9ULU8 1353 aa48.01■■■■■ 5.28
TPGS2-216ENST00000591648 PDS5BQ9NTI5 1447 aa47.95■■■■■ 5.27
TPGS2-216ENST00000591648 KIF21AQ7Z4S6 1674 aa47.94■■■■■ 5.26
TPGS2-216ENST00000591648 TOP2AP11388 1531 aaKnown RBP47.91■■■■■ 5.26
TPGS2-216ENST00000591648 THOC2Q8NI27 1593 aaKnown RBP47.91■■■■■ 5.26
TPGS2-216ENST00000591648 DNAJC5Q9H3Z4 198 aa47.57■■■■■ 5.21
TPGS2-216ENST00000591648 CFTRP13569 1480 aa47.57■■■■■ 5.21
TPGS2-216ENST00000591648 MRC2Q9UBG0 1479 aa47.53■■■■■ 5.2
TPGS2-216ENST00000591648 FANCD2Q9BXW9 1451 aa47.5■■■■■ 5.19
TPGS2-216ENST00000591648 CEP164Q9UPV0 1460 aa47.47■■■■■ 5.19
TPGS2-216ENST00000591648 CCDC88BA6NC98 1476 aa47.42■■■■■ 5.18
TPGS2-216ENST00000591648 WDR62O43379 1518 aa47.36■■■■■ 5.17
TPGS2-216ENST00000591648 URB2Q14146 1524 aaKnown RBP47.09■■■■■ 5.13
TPGS2-216ENST00000591648 PRDM2Q13029 1718 aa47.05■■■■■ 5.12
TPGS2-216ENST00000591648 SUPT5HO00267 1087 aaKnown RBP46.76■■■■■ 5.08
TPGS2-216ENST00000591648 TOPBP1Q92547 1522 aa46.65■■■■■ 5.06
TPGS2-216ENST00000591648 DNMBPQ6XZF7 1577 aa46.5■■■■■ 5.03
TPGS2-216ENST00000591648 ABCC8Q09428 1581 aa46.47■■■■■ 5.03
TPGS2-216ENST00000591648 IFT140Q96RY7 1462 aa46.47■■■■■ 5.03
TPGS2-216ENST00000591648 ZNF608Q9ULD9 1512 aaPredicted RBP46.45■■■■■ 5.03
TPGS2-216ENST00000591648 POLA1P09884 1462 aaPredicted RBP46.23■■■■■ 4.99
TPGS2-216ENST00000591648 OSCARQ8IYS5 282 aa46.18■■■■■ 4.98
TPGS2-216ENST00000591648 TARBP1Q13395 1621 aaKnown RBP46.17■■■■■ 4.98
TPGS2-216ENST00000591648 EIF4G3O43432 1585 aaKnown RBP46.15■■■■■ 4.98
TPGS2-216ENST00000591648 RAD54L2Q9Y4B4 1467 aa46.12■■■■■ 4.97
TPGS2-216ENST00000591648 AQRO60306 1485 aaKnown RBP eCLIP46.11■■■■■ 4.973e-8■□□□□ 11.2
TPGS2-216ENST00000591648 CUX1P39880 1505 aa46.1■■■■■ 4.97
TPGS2-216ENST00000591648 FGD5Q6ZNL6 1462 aa46.04■■■■■ 4.96
TPGS2-216ENST00000591648 SOGA1O94964 1423 aa46.03■■■■■ 4.96
TPGS2-216ENST00000591648 TDRD9Q8NDG6 1382 aaKnown RBP45.94■■■■■ 4.94
TPGS2-216ENST00000591648 TRIM41Q8WV44 630 aa45.91■■■■■ 4.94
TPGS2-216ENST00000591648 FBLN2P98095 1184 aa45.75■■■■■ 4.91
TPGS2-216ENST00000591648 CHD1O14646 1710 aa45.69■■■■■ 4.91
TPGS2-216ENST00000591648 SNAPC4Q5SXM2 1469 aa45.63■■■■■ 4.9
TPGS2-216ENST00000591648 WDR97A6NE52 1622 aa45.6■■■■■ 4.89
TPGS2-216ENST00000591648 WRNQ14191 1432 aaPredicted RBP eCLIP45.53■■■■■ 4.88
TPGS2-216ENST00000591648 GRIN2BQ13224 1484 aa45.53■■■■■ 4.88
TPGS2-216ENST00000591648 RIMBP3CA6NJZ7 1639 aa45.52■■■■■ 4.88
TPGS2-216ENST00000591648 RIMBP3BA6NNM3 1639 aa45.52■■■■■ 4.88
TPGS2-216ENST00000591648 RIMBP3Q9UFD9 1639 aa45.52■■■■■ 4.88
TPGS2-216ENST00000591648 SYNJ1O43426 1573 aa45.5■■■■■ 4.87
TPGS2-216ENST00000591648 ABCA10Q8WWZ4 1543 aa45.48■■■■■ 4.87
TPGS2-216ENST00000591648 GAPVD1Q14C86 1478 aa45.48■■■■■ 4.87
TPGS2-216ENST00000591648 TOP2BQ02880 1626 aa45.45■■■■■ 4.87
TPGS2-216ENST00000591648 ARHGEF11O15085 1522 aa45.44■■■■■ 4.86
TPGS2-216ENST00000591648 BIVM-ERCC5R4GMW8 1640 aa45.44■■■■■ 4.86
TPGS2-216ENST00000591648 MAGI1Q96QZ7 1491 aaPredicted RBP45.42■■■■■ 4.86
TPGS2-216ENST00000591648 CHMP7Q8WUX9 453 aaPredicted RBP45.42■■■■■ 4.86
TPGS2-216ENST00000591648 PBRM1Q86U86 1689 aa45.39■■■■■ 4.86
TPGS2-216ENST00000591648 ABCA5Q8WWZ7 1642 aa45.37■■■■■ 4.85
TPGS2-216ENST00000591648 SYNJ2O15056 1496 aa45.3■■■■■ 4.84
TPGS2-216ENST00000591648 CLASP1Q7Z460 1538 aa45.16■■■■■ 4.82
TPGS2-216ENST00000591648 CYB5RLQ6IPT4 315 aa45.16■■■■■ 4.82
TPGS2-216ENST00000591648 ARAP1Q96P48 1450 aa45.05■■■■■ 4.8
TPGS2-216ENST00000591648 ADAMTS12P58397 1594 aa45■■■■■ 4.79
TPGS2-216ENST00000591648 GRIN2AQ12879 1464 aa44.96■■■■■ 4.79
TPGS2-216ENST00000591648 FHAD1B1AJZ9 1412 aa44.9■■■■■ 4.78
TPGS2-216ENST00000591648 ERICH3Q5RHP9 1530 aa44.9■■■■■ 4.78
TPGS2-216ENST00000591648 CEP170Q5SW79 1584 aa44.8■■■■■ 4.76
TPGS2-216ENST00000591648 NUP160Q12769 1436 aa44.75■■■■■ 4.76
TPGS2-216ENST00000591648 ERCC6L2Q5T890 1561 aa44.61■■■■■ 4.73
TPGS2-216ENST00000591648 KIF27Q86VH2 1401 aa44.6■■■■■ 4.73
TPGS2-216ENST00000591648 IGF1RP08069 1367 aa44.56■■■■■ 4.72
TPGS2-216ENST00000591648 TRHP20396 242 aaPredicted RBP44.48■■■■■ 4.71
TPGS2-216ENST00000591648 SHROOM2Q13796 1616 aa44.46■■■■■ 4.71
TPGS2-216ENST00000591648 JPH4Q96JJ6 628 aa44.36■■■■■ 4.69
TPGS2-216ENST00000591648 CUL7Q14999 1698 aa44.35■■■■■ 4.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms