RNA–Protein interactions for RNA: ENST00000591499.5

RAD23A-208, Transcript of RAD23 homolog A, nucleotide excision repair protein, humanhuman

TSL 2

Gene RAD23A, Length 1,350 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23A-208ENST00000591499 NISCHQ9Y2I1 1504 aa49.58■■■■■ 5.53
RAD23A-208ENST00000591499 ABCC9O60706 1549 aa45.02■■■■■ 4.8
RAD23A-208ENST00000591499 CCDC180Q9P1Z9 1646 aa44.53■■■■■ 4.72
RAD23A-208ENST00000591499 DNAJC5BQ9UF47 199 aa42.65■■■■■ 4.42
RAD23A-208ENST00000591499 RB1CC1Q8TDY2 1594 aa42.58■■■■■ 4.41
RAD23A-208ENST00000591499 NACADO15069 1562 aa42.22■■■■■ 4.35
RAD23A-208ENST00000591499 DCAF8L2P0C7V8 631 aa42.05■■■■■ 4.32
RAD23A-208ENST00000591499 PABPN1Q86U42 306 aaKnown RBP eCLIP41.92■■■■■ 4.3
RAD23A-208ENST00000591499 UNC13AQ9UPW8 1703 aa41.61■■■■■ 4.25
RAD23A-208ENST00000591499 MYO15BQ96JP2 1530 aa41.52■■■■■ 4.24
RAD23A-208ENST00000591499 BICRAQ9NZM4 1560 aa41.45■■■■■ 4.23
RAD23A-208ENST00000591499 ZCCHC6Q5VYS8 1495 aaKnown RBP41.02■■■■■ 4.16
RAD23A-208ENST00000591499 DCAF1Q9Y4B6 1507 aa40.87■■■■■ 4.13
RAD23A-208ENST00000591499 SHROOM4Q9ULL8 1493 aa40.73■■■■■ 4.11
RAD23A-208ENST00000591499 SCRIBQ14160 1630 aa40.66■■■■■ 4.1
RAD23A-208ENST00000591499 CC2D2AQ9P2K1 1620 aa40.6■■■■■ 4.09
RAD23A-208ENST00000591499 CECR2Q9BXF3 1484 aa40.57■■■■■ 4.08
RAD23A-208ENST00000591499 EIF4G1Q04637 1599 aaKnown RBP40.43■■■■■ 4.06
RAD23A-208ENST00000591499 DNAJC5Q9H3Z4 198 aa39.3■■■■□ 3.88
RAD23A-208ENST00000591499 NCAPD3P42695 1498 aa39.04■■■■□ 3.84
RAD23A-208ENST00000591499 ATAD2BQ9ULI0 1458 aa38.9■■■■□ 3.82
RAD23A-208ENST00000591499 CUX2O14529 1486 aa38.86■■■■□ 3.81
RAD23A-208ENST00000591499 ERCC6Q03468 1493 aa38.83■■■■□ 3.81
RAD23A-208ENST00000591499 SMARCA4P51532 1647 aa38.72■■■■□ 3.79
RAD23A-208ENST00000591499 SMARCA2P51531 1590 aa38.69■■■■□ 3.78
RAD23A-208ENST00000591499 HMGXB3Q12766 1538 aa38.67■■■■□ 3.78
RAD23A-208ENST00000591499 NESP48681 1621 aa38.6■■■■□ 3.77
RAD23A-208ENST00000591499 BAZ1BQ9UIG0 1483 aaKnown RBP38.47■■■■□ 3.75
RAD23A-208ENST00000591499 BAZ1AQ9NRL2 1556 aaPredicted RBP38.46■■■■□ 3.75
RAD23A-208ENST00000591499 PEG3Q9GZU2 1588 aa38.34■■■■□ 3.73
RAD23A-208ENST00000591499 MROH2BQ7Z745 1585 aa38.24■■■■□ 3.71
RAD23A-208ENST00000591499 THOC2Q8NI27 1593 aaKnown RBP38.21■■■■□ 3.71
RAD23A-208ENST00000591499 LAMC3Q9Y6N6 1575 aa38.15■■■■□ 3.7
RAD23A-208ENST00000591499 KIF21AQ7Z4S6 1674 aa37.98■■■■□ 3.67
RAD23A-208ENST00000591499 PDS5BQ9NTI5 1447 aa37.97■■■■□ 3.67
RAD23A-208ENST00000591499 CADPSQ9ULU8 1353 aa37.85■■■■□ 3.65
RAD23A-208ENST00000591499 WIZO95785 1651 aa37.73■■■■□ 3.63
RAD23A-208ENST00000591499 MRC2Q9UBG0 1479 aa37.69■■■■□ 3.62
RAD23A-208ENST00000591499 WDR62O43379 1518 aa37.61■■■■□ 3.61
RAD23A-208ENST00000591499 TRIM41Q8WV44 630 aa37.47■■■■□ 3.59
RAD23A-208ENST00000591499 CEP164Q9UPV0 1460 aa37.46■■■■□ 3.59
RAD23A-208ENST00000591499 FANCD2Q9BXW9 1451 aa37.42■■■■□ 3.58
RAD23A-208ENST00000591499 CFTRP13569 1480 aa37.34■■■■□ 3.57
RAD23A-208ENST00000591499 RSF1Q96T23 1441 aaPredicted RBP37.33■■■■□ 3.57
RAD23A-208ENST00000591499 TOP2AP11388 1531 aaKnown RBP37.2■■■■□ 3.55
RAD23A-208ENST00000591499 URB2Q14146 1524 aaKnown RBP37.17■■■■□ 3.54
RAD23A-208ENST00000591499 OSCARQ8IYS5 282 aa37.06■■■■□ 3.52
RAD23A-208ENST00000591499 CCDC88BA6NC98 1476 aa36.85■■■■□ 3.49
RAD23A-208ENST00000591499 ZNF608Q9ULD9 1512 aaPredicted RBP36.79■■■■□ 3.48
RAD23A-208ENST00000591499 PRDM2Q13029 1718 aa36.78■■■■□ 3.48
RAD23A-208ENST00000591499 IFT140Q96RY7 1462 aa36.73■■■■□ 3.47
RAD23A-208ENST00000591499 TOPBP1Q92547 1522 aa36.68■■■■□ 3.46
RAD23A-208ENST00000591499 RIMBP3CA6NJZ7 1639 aa36.61■■■■□ 3.45
RAD23A-208ENST00000591499 RIMBP3BA6NNM3 1639 aa36.61■■■■□ 3.45
RAD23A-208ENST00000591499 RIMBP3Q9UFD9 1639 aa36.61■■■■□ 3.45
RAD23A-208ENST00000591499 EIF4G3O43432 1585 aaKnown RBP36.48■■■■□ 3.43
RAD23A-208ENST00000591499 ABCC8Q09428 1581 aa36.48■■■■□ 3.43
RAD23A-208ENST00000591499 ARHGEF11O15085 1522 aa36.48■■■■□ 3.43
RAD23A-208ENST00000591499 DNMBPQ6XZF7 1577 aa36.47■■■■□ 3.43
RAD23A-208ENST00000591499 AQRO60306 1485 aaKnown RBP eCLIP36.41■■■■□ 3.427e-7■■■■■ 32.9
RAD23A-208ENST00000591499 TARBP1Q13395 1621 aaKnown RBP36.36■■■■□ 3.41
RAD23A-208ENST00000591499 POLA1P09884 1462 aaPredicted RBP36.29■■■■□ 3.4
RAD23A-208ENST00000591499 CYB5RLQ6IPT4 315 aa36.27■■■■□ 3.4
RAD23A-208ENST00000591499 CHD1O14646 1710 aa36.24■■■■□ 3.39
RAD23A-208ENST00000591499 FBLN2P98095 1184 aa36.21■■■■□ 3.39
RAD23A-208ENST00000591499 RAD54L2Q9Y4B4 1467 aa36.21■■■■□ 3.39
RAD23A-208ENST00000591499 ARAP1Q96P48 1450 aa36.13■■■■□ 3.37
RAD23A-208ENST00000591499 TDRD9Q8NDG6 1382 aaKnown RBP36.13■■■■□ 3.37
RAD23A-208ENST00000591499 SOGA1O94964 1423 aa36.12■■■■□ 3.37
RAD23A-208ENST00000591499 FGD5Q6ZNL6 1462 aa36.01■■■■□ 3.35
RAD23A-208ENST00000591499 SNAPC4Q5SXM2 1469 aa35.99■■■■□ 3.35
RAD23A-208ENST00000591499 TRHP20396 242 aaPredicted RBP35.95■■■■□ 3.35
RAD23A-208ENST00000591499 CUX1P39880 1505 aa35.94■■■■□ 3.34
RAD23A-208ENST00000591499 CLASP1Q7Z460 1538 aa35.88■■■■□ 3.33
RAD23A-208ENST00000591499 CHMP7Q8WUX9 453 aaPredicted RBP35.87■■■■□ 3.33
RAD23A-208ENST00000591499 WDR97A6NE52 1622 aa35.86■■■■□ 3.33
RAD23A-208ENST00000591499 MAGI1Q96QZ7 1491 aaPredicted RBP35.82■■■■□ 3.32
RAD23A-208ENST00000591499 GRIN2BQ13224 1484 aa35.8■■■■□ 3.32
RAD23A-208ENST00000591499 SYNJ1O43426 1573 aa35.76■■■■□ 3.32
RAD23A-208ENST00000591499 SYNJ2O15056 1496 aa35.73■■■■□ 3.31
RAD23A-208ENST00000591499 GAPVD1Q14C86 1478 aa35.65■■■■□ 3.3
RAD23A-208ENST00000591499 PBRM1Q86U86 1689 aa35.58■■■■□ 3.29
RAD23A-208ENST00000591499 ABCA10Q8WWZ4 1543 aa35.56■■■■□ 3.28
RAD23A-208ENST00000591499 ABCA5Q8WWZ7 1642 aa35.53■■■■□ 3.28
RAD23A-208ENST00000591499 SUPT5HO00267 1087 aaKnown RBP35.45■■■■□ 3.27
RAD23A-208ENST00000591499 GRIN2AQ12879 1464 aa35.36■■■■□ 3.25
RAD23A-208ENST00000591499 ERCC6L2Q5T890 1561 aa35.36■■■■□ 3.25
RAD23A-208ENST00000591499 WRNQ14191 1432 aaPredicted RBP eCLIP35.34■■■■□ 3.25
RAD23A-208ENST00000591499 ADAMTS12P58397 1594 aa35.29■■■■□ 3.24
RAD23A-208ENST00000591499 CEP170Q5SW79 1584 aa35.27■■■■□ 3.24
RAD23A-208ENST00000591499 NUP160Q12769 1436 aa35.27■■■■□ 3.24
RAD23A-208ENST00000591499 TOP2BQ02880 1626 aa35.21■■■■□ 3.23
RAD23A-208ENST00000591499 BIVM-ERCC5R4GMW8 1640 aa35.19■■■■□ 3.22
RAD23A-208ENST00000591499 FHAD1B1AJZ9 1412 aa35.18■■■■□ 3.22
RAD23A-208ENST00000591499 SHROOM2Q13796 1616 aa35.1■■■■□ 3.21
RAD23A-208ENST00000591499 AEBP2Q6ZN18 517 aaPredicted RBP35.1■■■■□ 3.21
RAD23A-208ENST00000591499 ERICH3Q5RHP9 1530 aa35.07■■■■□ 3.21
RAD23A-208ENST00000591499 PRG4Q92954 1404 aaPredicted RBP34.97■■■■□ 3.19
RAD23A-208ENST00000591499 JPH4Q96JJ6 628 aa34.92■■■■□ 3.18
RAD23A-208ENST00000591499 RUSC2Q8N2Y8 1516 aa34.79■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms