RNA–Protein interactions for RNA: ENST00000591268.1

HDHD2-210, Transcript of haloacid dehalogenase like hydrolase domain containing 2, humanhuman

TSL 4

Gene HDHD2, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD2-210ENST00000591268 NISCHQ9Y2I1 1504 aa46.9■■■■■ 5.1
HDHD2-210ENST00000591268 CCDC180Q9P1Z9 1646 aa42.18■■■■■ 4.34
HDHD2-210ENST00000591268 ABCC9O60706 1549 aa41.69■■■■■ 4.26
HDHD2-210ENST00000591268 RB1CC1Q8TDY2 1594 aa39.92■■■■□ 3.98
HDHD2-210ENST00000591268 NACADO15069 1562 aa39.72■■■■□ 3.95
HDHD2-210ENST00000591268 MYO15BQ96JP2 1530 aa39.33■■■■□ 3.89
HDHD2-210ENST00000591268 UNC13AQ9UPW8 1703 aa39.16■■■■□ 3.86
HDHD2-210ENST00000591268 DCAF8L2P0C7V8 631 aa39.07■■■■□ 3.85
HDHD2-210ENST00000591268 ZCCHC6Q5VYS8 1495 aaKnown RBP38.97■■■■□ 3.83
HDHD2-210ENST00000591268 DCAF1Q9Y4B6 1507 aa38.88■■■■□ 3.81
HDHD2-210ENST00000591268 DNAJC5BQ9UF47 199 aa38.87■■■■□ 3.81
HDHD2-210ENST00000591268 BICRAQ9NZM4 1560 aa38.8■■■■□ 3.8
HDHD2-210ENST00000591268 PABPN1Q86U42 306 aaKnown RBP eCLIP38.7■■■■□ 3.79
HDHD2-210ENST00000591268 SHROOM4Q9ULL8 1493 aa38.39■■■■□ 3.74
HDHD2-210ENST00000591268 SCRIBQ14160 1630 aa38.24■■■■□ 3.71
HDHD2-210ENST00000591268 CC2D2AQ9P2K1 1620 aa37.79■■■■□ 3.64
HDHD2-210ENST00000591268 EIF4G1Q04637 1599 aaKnown RBP37.79■■■■□ 3.64
HDHD2-210ENST00000591268 CECR2Q9BXF3 1484 aa37.58■■■■□ 3.61
HDHD2-210ENST00000591268 NCAPD3P42695 1498 aa36.62■■■■□ 3.45
HDHD2-210ENST00000591268 SMARCA4P51532 1647 aa36.59■■■■□ 3.45
HDHD2-210ENST00000591268 ATAD2BQ9ULI0 1458 aa36.5■■■■□ 3.43
HDHD2-210ENST00000591268 SMARCA2P51531 1590 aa36.47■■■■□ 3.43
HDHD2-210ENST00000591268 HMGXB3Q12766 1538 aa36.45■■■■□ 3.43
HDHD2-210ENST00000591268 BAZ1AQ9NRL2 1556 aaPredicted RBP36.41■■■■□ 3.42
HDHD2-210ENST00000591268 PEG3Q9GZU2 1588 aa36.32■■■■□ 3.41
HDHD2-210ENST00000591268 BAZ1BQ9UIG0 1483 aaKnown RBP36.14■■■■□ 3.38
HDHD2-210ENST00000591268 MROH2BQ7Z745 1585 aa36.1■■■■□ 3.37
HDHD2-210ENST00000591268 CUX2O14529 1486 aa35.99■■■■□ 3.35
HDHD2-210ENST00000591268 ERCC6Q03468 1493 aa35.97■■■■□ 3.35
HDHD2-210ENST00000591268 NESP48681 1621 aa35.9■■■■□ 3.34
HDHD2-210ENST00000591268 LAMC3Q9Y6N6 1575 aa35.82■■■■□ 3.32
HDHD2-210ENST00000591268 WIZO95785 1651 aa35.71■■■■□ 3.31
HDHD2-210ENST00000591268 THOC2Q8NI27 1593 aaKnown RBP35.68■■■■□ 3.3
HDHD2-210ENST00000591268 KIF21AQ7Z4S6 1674 aa35.59■■■■□ 3.29
HDHD2-210ENST00000591268 DNAJC5Q9H3Z4 198 aa35.58■■■■□ 3.29
HDHD2-210ENST00000591268 PDS5BQ9NTI5 1447 aa35.48■■■■□ 3.27
HDHD2-210ENST00000591268 CADPSQ9ULU8 1353 aa35.43■■■■□ 3.26
HDHD2-210ENST00000591268 RSF1Q96T23 1441 aaPredicted RBP35.4■■■■□ 3.26
HDHD2-210ENST00000591268 TOP2AP11388 1531 aaKnown RBP35.31■■■■□ 3.24
HDHD2-210ENST00000591268 MRC2Q9UBG0 1479 aa35.21■■■■□ 3.23
HDHD2-210ENST00000591268 WDR62O43379 1518 aa35.2■■■■□ 3.23
HDHD2-210ENST00000591268 CFTRP13569 1480 aa35.15■■■■□ 3.22
HDHD2-210ENST00000591268 CEP164Q9UPV0 1460 aa35.09■■■■□ 3.21
HDHD2-210ENST00000591268 FANCD2Q9BXW9 1451 aa35.05■■■■□ 3.2
HDHD2-210ENST00000591268 PRDM2Q13029 1718 aa35.03■■■■□ 3.2
HDHD2-210ENST00000591268 CCDC88BA6NC98 1476 aa34.81■■■■□ 3.16
HDHD2-210ENST00000591268 URB2Q14146 1524 aaKnown RBP34.79■■■■□ 3.16
HDHD2-210ENST00000591268 TOPBP1Q92547 1522 aa34.45■■■■□ 3.1
HDHD2-210ENST00000591268 ABCC8Q09428 1581 aa34.4■■■■□ 3.1
HDHD2-210ENST00000591268 IFT140Q96RY7 1462 aa34.39■■■■□ 3.1
HDHD2-210ENST00000591268 DNMBPQ6XZF7 1577 aa34.39■■■■□ 3.1
HDHD2-210ENST00000591268 ZNF608Q9ULD9 1512 aaPredicted RBP34.28■■■■□ 3.08
HDHD2-210ENST00000591268 EIF4G3O43432 1585 aaKnown RBP34.22■■■■□ 3.07
HDHD2-210ENST00000591268 TARBP1Q13395 1621 aaKnown RBP34.22■■■■□ 3.07
HDHD2-210ENST00000591268 OSCARQ8IYS5 282 aa34.16■■■■□ 3.06
HDHD2-210ENST00000591268 POLA1P09884 1462 aaPredicted RBP34.11■■■■□ 3.05
HDHD2-210ENST00000591268 WDR97A6NE52 1622 aa33.97■■■■□ 3.03
HDHD2-210ENST00000591268 CHD1O14646 1710 aa33.94■■■■□ 3.02
HDHD2-210ENST00000591268 AQRO60306 1485 aaKnown RBP eCLIP33.94■■■■□ 3.02
HDHD2-210ENST00000591268 TRIM41Q8WV44 630 aa33.93■■■■□ 3.02
HDHD2-210ENST00000591268 CUX1P39880 1505 aa33.93■■■■□ 3.02
HDHD2-210ENST00000591268 RIMBP3CA6NJZ7 1639 aa33.9■■■■□ 3.02
HDHD2-210ENST00000591268 RIMBP3BA6NNM3 1639 aa33.9■■■■□ 3.02
HDHD2-210ENST00000591268 RIMBP3Q9UFD9 1639 aa33.9■■■■□ 3.02
HDHD2-210ENST00000591268 FGD5Q6ZNL6 1462 aa33.89■■■■□ 3.02
HDHD2-210ENST00000591268 RAD54L2Q9Y4B4 1467 aa33.89■■■■□ 3.02
HDHD2-210ENST00000591268 SOGA1O94964 1423 aa33.85■■■■□ 3.01
HDHD2-210ENST00000591268 ARHGEF11O15085 1522 aa33.79■■■■□ 3
HDHD2-210ENST00000591268 TDRD9Q8NDG6 1382 aaKnown RBP33.72■■■□□ 2.99
HDHD2-210ENST00000591268 SUPT5HO00267 1087 aaKnown RBP33.68■■■□□ 2.98
HDHD2-210ENST00000591268 SNAPC4Q5SXM2 1469 aa33.66■■■□□ 2.98
HDHD2-210ENST00000591268 MAGI1Q96QZ7 1491 aaPredicted RBP33.65■■■□□ 2.98
HDHD2-210ENST00000591268 PBRM1Q86U86 1689 aa33.63■■■□□ 2.97
HDHD2-210ENST00000591268 GRIN2BQ13224 1484 aa33.61■■■□□ 2.97
HDHD2-210ENST00000591268 ABCA5Q8WWZ7 1642 aa33.59■■■□□ 2.97
HDHD2-210ENST00000591268 ABCA10Q8WWZ4 1543 aa33.58■■■□□ 2.97
HDHD2-210ENST00000591268 CLASP1Q7Z460 1538 aa33.57■■■□□ 2.96
HDHD2-210ENST00000591268 BIVM-ERCC5R4GMW8 1640 aa33.55■■■□□ 2.96
HDHD2-210ENST00000591268 SYNJ2O15056 1496 aa33.5■■■□□ 2.95
HDHD2-210ENST00000591268 SYNJ1O43426 1573 aa33.5■■■□□ 2.95
HDHD2-210ENST00000591268 GAPVD1Q14C86 1478 aa33.5■■■□□ 2.95
HDHD2-210ENST00000591268 TOP2BQ02880 1626 aa33.5■■■□□ 2.95
HDHD2-210ENST00000591268 FBLN2P98095 1184 aa33.49■■■□□ 2.95
HDHD2-210ENST00000591268 ARAP1Q96P48 1450 aa33.46■■■□□ 2.95
HDHD2-210ENST00000591268 WRNQ14191 1432 aaPredicted RBP eCLIP33.38■■■□□ 2.93
HDHD2-210ENST00000591268 CHMP7Q8WUX9 453 aaPredicted RBP33.36■■■□□ 2.93
HDHD2-210ENST00000591268 ADAMTS12P58397 1594 aa33.3■■■□□ 2.92
HDHD2-210ENST00000591268 CYB5RLQ6IPT4 315 aa33.28■■■□□ 2.92
HDHD2-210ENST00000591268 GRIN2AQ12879 1464 aa33.21■■■□□ 2.91
HDHD2-210ENST00000591268 ERICH3Q5RHP9 1530 aa33.18■■■□□ 2.9
HDHD2-210ENST00000591268 NUP160Q12769 1436 aa33.12■■■□□ 2.89
HDHD2-210ENST00000591268 CEP170Q5SW79 1584 aa33.12■■■□□ 2.89
HDHD2-210ENST00000591268 FHAD1B1AJZ9 1412 aa33.1■■■□□ 2.89
HDHD2-210ENST00000591268 SHROOM2Q13796 1616 aa33.05■■■□□ 2.88
HDHD2-210ENST00000591268 ERCC6L2Q5T890 1561 aa32.96■■■□□ 2.87
HDHD2-210ENST00000591268 RUSC2Q8N2Y8 1516 aa32.84■■■□□ 2.85
HDHD2-210ENST00000591268 TRHP20396 242 aaPredicted RBP32.79■■■□□ 2.84
HDHD2-210ENST00000591268 CUL7Q14999 1698 aa32.78■■■□□ 2.84
HDHD2-210ENST00000591268 KIF27Q86VH2 1401 aa32.71■■■□□ 2.83
HDHD2-210ENST00000591268 IGF1RP08069 1367 aa32.66■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms