RNA–Protein interactions for RNA: ENST00000591250.1

PSMD8-205, Transcript of proteasome 26S subunit, non-ATPase 8, humanhuman

TSL 3

Gene PSMD8, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD8-205ENST00000591250 NISCHQ9Y2I1 1504 aa32.25■■■□□ 2.75
PSMD8-205ENST00000591250 ABCC9O60706 1549 aa29.57■■■□□ 2.32
PSMD8-205ENST00000591250 CCDC180Q9P1Z9 1646 aa29.15■■■□□ 2.26
PSMD8-205ENST00000591250 DNAJC5BQ9UF47 199 aa28.2■■■□□ 2.1
PSMD8-205ENST00000591250 RB1CC1Q8TDY2 1594 aa27.93■■■□□ 2.06
PSMD8-205ENST00000591250 NACADO15069 1562 aa27.63■■■□□ 2.01
PSMD8-205ENST00000591250 PABPN1Q86U42 306 aaKnown RBP eCLIP27.44■■□□□ 1.98
PSMD8-205ENST00000591250 UNC13AQ9UPW8 1703 aa27.42■■□□□ 1.98
PSMD8-205ENST00000591250 DCAF8L2P0C7V8 631 aa27.31■■□□□ 1.96
PSMD8-205ENST00000591250 BICRAQ9NZM4 1560 aa27.22■■□□□ 1.95
PSMD8-205ENST00000591250 MYO15BQ96JP2 1530 aa27.11■■□□□ 1.93
PSMD8-205ENST00000591250 CC2D2AQ9P2K1 1620 aa26.72■■□□□ 1.87
PSMD8-205ENST00000591250 SHROOM4Q9ULL8 1493 aa26.7■■□□□ 1.87
PSMD8-205ENST00000591250 CECR2Q9BXF3 1484 aa26.67■■□□□ 1.86
PSMD8-205ENST00000591250 ZCCHC6Q5VYS8 1495 aaKnown RBP26.63■■□□□ 1.85
PSMD8-205ENST00000591250 DCAF1Q9Y4B6 1507 aa26.6■■□□□ 1.85
PSMD8-205ENST00000591250 EIF4G1Q04637 1599 aaKnown RBP26.54■■□□□ 1.84
PSMD8-205ENST00000591250 SCRIBQ14160 1630 aa26.53■■□□□ 1.84
PSMD8-205ENST00000591250 DNAJC5Q9H3Z4 198 aa26.15■■□□□ 1.78
PSMD8-205ENST00000591250 CUX2O14529 1486 aa25.65■■□□□ 1.7
PSMD8-205ENST00000591250 NCAPD3P42695 1498 aa25.52■■□□□ 1.68
PSMD8-205ENST00000591250 ERCC6Q03468 1493 aa25.5■■□□□ 1.67
PSMD8-205ENST00000591250 ATAD2BQ9ULI0 1458 aa25.39■■□□□ 1.65
PSMD8-205ENST00000591250 NESP48681 1621 aa25.31■■□□□ 1.64
PSMD8-205ENST00000591250 HMGXB3Q12766 1538 aa25.3■■□□□ 1.64
PSMD8-205ENST00000591250 SMARCA4P51532 1647 aa25.27■■□□□ 1.64
PSMD8-205ENST00000591250 SMARCA2P51531 1590 aa25.27■■□□□ 1.64
PSMD8-205ENST00000591250 THOC2Q8NI27 1593 aaKnown RBP25.16■■□□□ 1.62
PSMD8-205ENST00000591250 BAZ1BQ9UIG0 1483 aaKnown RBP25.09■■□□□ 1.61
PSMD8-205ENST00000591250 PEG3Q9GZU2 1588 aa25.03■■□□□ 1.6
PSMD8-205ENST00000591250 BAZ1AQ9NRL2 1556 aaPredicted RBP25.03■■□□□ 1.6
PSMD8-205ENST00000591250 LAMC3Q9Y6N6 1575 aa25.01■■□□□ 1.59
PSMD8-205ENST00000591250 KIF21AQ7Z4S6 1674 aa24.99■■□□□ 1.59
PSMD8-205ENST00000591250 MROH2BQ7Z745 1585 aa24.87■■□□□ 1.57
PSMD8-205ENST00000591250 PDS5BQ9NTI5 1447 aa24.83■■□□□ 1.57
PSMD8-205ENST00000591250 TRIM41Q8WV44 630 aa24.78■■□□□ 1.56
PSMD8-205ENST00000591250 MRC2Q9UBG0 1479 aa24.7■■□□□ 1.54
PSMD8-205ENST00000591250 CADPSQ9ULU8 1353 aa24.69■■□□□ 1.54
PSMD8-205ENST00000591250 WDR62O43379 1518 aa24.67■■□□□ 1.54
PSMD8-205ENST00000591250 WIZO95785 1651 aa24.56■■□□□ 1.52
PSMD8-205ENST00000591250 CEP164Q9UPV0 1460 aa24.49■■□□□ 1.51
PSMD8-205ENST00000591250 FANCD2Q9BXW9 1451 aa24.44■■□□□ 1.5
PSMD8-205ENST00000591250 OSCARQ8IYS5 282 aa24.36■■□□□ 1.49
PSMD8-205ENST00000591250 CFTRP13569 1480 aa24.35■■□□□ 1.49
PSMD8-205ENST00000591250 URB2Q14146 1524 aaKnown RBP24.3■■□□□ 1.48
PSMD8-205ENST00000591250 RIMBP3CA6NJZ7 1639 aa24.19■■□□□ 1.46
PSMD8-205ENST00000591250 RIMBP3BA6NNM3 1639 aa24.19■■□□□ 1.46
PSMD8-205ENST00000591250 RIMBP3Q9UFD9 1639 aa24.19■■□□□ 1.46
PSMD8-205ENST00000591250 TOP2AP11388 1531 aaKnown RBP24.18■■□□□ 1.46
PSMD8-205ENST00000591250 RSF1Q96T23 1441 aaPredicted RBP24.16■■□□□ 1.46
PSMD8-205ENST00000591250 PRDM2Q13029 1718 aa24.13■■□□□ 1.45
PSMD8-205ENST00000591250 ZNF608Q9ULD9 1512 aaPredicted RBP24.08■■□□□ 1.45
PSMD8-205ENST00000591250 ARHGEF11O15085 1522 aa24.04■■□□□ 1.44
PSMD8-205ENST00000591250 IFT140Q96RY7 1462 aa24.01■■□□□ 1.43
PSMD8-205ENST00000591250 TOPBP1Q92547 1522 aa23.94■■□□□ 1.42
PSMD8-205ENST00000591250 EIF4G3O43432 1585 aaKnown RBP23.92■■□□□ 1.42
PSMD8-205ENST00000591250 CCDC88BA6NC98 1476 aa23.91■■□□□ 1.42
PSMD8-205ENST00000591250 CHD1O14646 1710 aa23.86■■□□□ 1.41
PSMD8-205ENST00000591250 CYB5RLQ6IPT4 315 aa23.84■■□□□ 1.41
PSMD8-205ENST00000591250 DNMBPQ6XZF7 1577 aa23.81■■□□□ 1.4
PSMD8-205ENST00000591250 TARBP1Q13395 1621 aaKnown RBP23.81■■□□□ 1.4
PSMD8-205ENST00000591250 ABCC8Q09428 1581 aa23.79■■□□□ 1.4
PSMD8-205ENST00000591250 ARAP1Q96P48 1450 aa23.79■■□□□ 1.4
PSMD8-205ENST00000591250 AQRO60306 1485 aaKnown RBP eCLIP23.78■■□□□ 1.49e-9■■■■■ 35.9
PSMD8-205ENST00000591250 TRHP20396 242 aaPredicted RBP23.68■■□□□ 1.38
PSMD8-205ENST00000591250 POLA1P09884 1462 aaPredicted RBP23.67■■□□□ 1.38
PSMD8-205ENST00000591250 FBLN2P98095 1184 aa23.64■■□□□ 1.37
PSMD8-205ENST00000591250 RAD54L2Q9Y4B4 1467 aa23.6■■□□□ 1.37
PSMD8-205ENST00000591250 CLASP1Q7Z460 1538 aa23.55■■□□□ 1.36
PSMD8-205ENST00000591250 TDRD9Q8NDG6 1382 aaKnown RBP23.54■■□□□ 1.36
PSMD8-205ENST00000591250 SNAPC4Q5SXM2 1469 aa23.52■■□□□ 1.36
PSMD8-205ENST00000591250 SOGA1O94964 1423 aa23.51■■□□□ 1.35
PSMD8-205ENST00000591250 WDR97A6NE52 1622 aa23.47■■□□□ 1.35
PSMD8-205ENST00000591250 FGD5Q6ZNL6 1462 aa23.45■■□□□ 1.34
PSMD8-205ENST00000591250 SYNJ1O43426 1573 aa23.44■■□□□ 1.34
PSMD8-205ENST00000591250 MAGI1Q96QZ7 1491 aaPredicted RBP23.41■■□□□ 1.34
PSMD8-205ENST00000591250 CUX1P39880 1505 aa23.38■■□□□ 1.33
PSMD8-205ENST00000591250 CHMP7Q8WUX9 453 aaPredicted RBP23.38■■□□□ 1.33
PSMD8-205ENST00000591250 GRIN2BQ13224 1484 aa23.36■■□□□ 1.33
PSMD8-205ENST00000591250 SYNJ2O15056 1496 aa23.35■■□□□ 1.33
PSMD8-205ENST00000591250 PBRM1Q86U86 1689 aa23.32■■□□□ 1.32
PSMD8-205ENST00000591250 AEBP2Q6ZN18 517 aaPredicted RBP23.29■■□□□ 1.32
PSMD8-205ENST00000591250 GAPVD1Q14C86 1478 aa23.29■■□□□ 1.32
PSMD8-205ENST00000591250 ABCA5Q8WWZ7 1642 aa23.2■■□□□ 1.3
PSMD8-205ENST00000591250 ERCC6L2Q5T890 1561 aa23.19■■□□□ 1.3
PSMD8-205ENST00000591250 ABCA10Q8WWZ4 1543 aa23.15■■□□□ 1.3
PSMD8-205ENST00000591250 GRIN2AQ12879 1464 aa23.09■■□□□ 1.29
PSMD8-205ENST00000591250 CEP170Q5SW79 1584 aa23.07■■□□□ 1.28
PSMD8-205ENST00000591250 ADAMTS12P58397 1594 aa23.04■■□□□ 1.28
PSMD8-205ENST00000591250 NUP160Q12769 1436 aa23.03■■□□□ 1.28
PSMD8-205ENST00000591250 SHROOM2Q13796 1616 aa23.03■■□□□ 1.28
PSMD8-205ENST00000591250 KIF13AQ9H1H9 1805 aa23■■□□□ 1.27
PSMD8-205ENST00000591250 WRNQ14191 1432 aaPredicted RBP eCLIP22.92■■□□□ 1.26
PSMD8-205ENST00000591250 FHAD1B1AJZ9 1412 aa22.91■■□□□ 1.26
PSMD8-205ENST00000591250 BIVM-ERCC5R4GMW8 1640 aa22.9■■□□□ 1.26
PSMD8-205ENST00000591250 TOP2BQ02880 1626 aa22.87■■□□□ 1.25
PSMD8-205ENST00000591250 ERICH3Q5RHP9 1530 aa22.84■■□□□ 1.25
PSMD8-205ENST00000591250 PRG4Q92954 1404 aaPredicted RBP22.82■■□□□ 1.24
PSMD8-205ENST00000591250 ABCC10Q5T3U5 1492 aa22.74■■□□□ 1.23
PSMD8-205ENST00000591250 RUSC2Q8N2Y8 1516 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 132.1 ms