RNA–Protein interactions for RNA: ENST00000591216.1

PSMD8-204, Transcript of proteasome 26S subunit, non-ATPase 8, humanhuman

TSL 3

Gene PSMD8, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD8-204ENST00000591216 NISCHQ9Y2I1 1504 aa44.31■■■■■ 4.68
PSMD8-204ENST00000591216 CCDC180Q9P1Z9 1646 aa39.51■■■■□ 3.92
PSMD8-204ENST00000591216 ABCC9O60706 1549 aa39■■■■□ 3.83
PSMD8-204ENST00000591216 RB1CC1Q8TDY2 1594 aa37.35■■■■□ 3.57
PSMD8-204ENST00000591216 NACADO15069 1562 aa37.24■■■■□ 3.55
PSMD8-204ENST00000591216 DCAF8L2P0C7V8 631 aa37.07■■■■□ 3.52
PSMD8-204ENST00000591216 MYO15BQ96JP2 1530 aa36.95■■■■□ 3.5
PSMD8-204ENST00000591216 ZCCHC6Q5VYS8 1495 aaKnown RBP36.82■■■■□ 3.49
PSMD8-204ENST00000591216 DCAF1Q9Y4B6 1507 aa36.65■■■■□ 3.46
PSMD8-204ENST00000591216 UNC13AQ9UPW8 1703 aa36.59■■■■□ 3.45
PSMD8-204ENST00000591216 PABPN1Q86U42 306 aaKnown RBP eCLIP36.41■■■■□ 3.42
PSMD8-204ENST00000591216 BICRAQ9NZM4 1560 aa36.33■■■■□ 3.41
PSMD8-204ENST00000591216 DNAJC5BQ9UF47 199 aa36.26■■■■□ 3.4
PSMD8-204ENST00000591216 SCRIBQ14160 1630 aa36.01■■■■□ 3.35
PSMD8-204ENST00000591216 SHROOM4Q9ULL8 1493 aa35.83■■■■□ 3.33
PSMD8-204ENST00000591216 EIF4G1Q04637 1599 aaKnown RBP35.34■■■■□ 3.25
PSMD8-204ENST00000591216 CC2D2AQ9P2K1 1620 aa35.28■■■■□ 3.24
PSMD8-204ENST00000591216 CECR2Q9BXF3 1484 aa35.09■■■■□ 3.21
PSMD8-204ENST00000591216 SMARCA4P51532 1647 aa34.44■■■■□ 3.1
PSMD8-204ENST00000591216 NCAPD3P42695 1498 aa34.41■■■■□ 3.1
PSMD8-204ENST00000591216 ATAD2BQ9ULI0 1458 aa34.36■■■■□ 3.09
PSMD8-204ENST00000591216 BAZ1AQ9NRL2 1556 aaPredicted RBP34.32■■■■□ 3.09
PSMD8-204ENST00000591216 SMARCA2P51531 1590 aa34.25■■■■□ 3.07
PSMD8-204ENST00000591216 HMGXB3Q12766 1538 aa34.16■■■■□ 3.06
PSMD8-204ENST00000591216 MROH2BQ7Z745 1585 aa34.15■■■■□ 3.06
PSMD8-204ENST00000591216 PEG3Q9GZU2 1588 aa34.15■■■■□ 3.06
PSMD8-204ENST00000591216 BAZ1BQ9UIG0 1483 aaKnown RBP34■■■■□ 3.03
PSMD8-204ENST00000591216 WIZO95785 1651 aa33.75■■■□□ 2.99
PSMD8-204ENST00000591216 NESP48681 1621 aa33.68■■■□□ 2.98
PSMD8-204ENST00000591216 RSF1Q96T23 1441 aaPredicted RBP33.63■■■□□ 2.97
PSMD8-204ENST00000591216 ERCC6Q03468 1493 aa33.58■■■□□ 2.97
PSMD8-204ENST00000591216 LAMC3Q9Y6N6 1575 aa33.51■■■□□ 2.96
PSMD8-204ENST00000591216 CUX2O14529 1486 aa33.42■■■□□ 2.94
PSMD8-204ENST00000591216 CADPSQ9ULU8 1353 aa33.36■■■□□ 2.93
PSMD8-204ENST00000591216 TOP2AP11388 1531 aaKnown RBP33.34■■■□□ 2.93
PSMD8-204ENST00000591216 PDS5BQ9NTI5 1447 aa33.28■■■□□ 2.92
PSMD8-204ENST00000591216 KIF21AQ7Z4S6 1674 aa33.26■■■□□ 2.92
PSMD8-204ENST00000591216 THOC2Q8NI27 1593 aaKnown RBP33.24■■■□□ 2.91
PSMD8-204ENST00000591216 CFTRP13569 1480 aa33.1■■■□□ 2.89
PSMD8-204ENST00000591216 CCDC88BA6NC98 1476 aa32.99■■■□□ 2.87
PSMD8-204ENST00000591216 MRC2Q9UBG0 1479 aa32.97■■■□□ 2.87
PSMD8-204ENST00000591216 FANCD2Q9BXW9 1451 aa32.96■■■□□ 2.87
PSMD8-204ENST00000591216 CEP164Q9UPV0 1460 aa32.93■■■□□ 2.86
PSMD8-204ENST00000591216 WDR62O43379 1518 aa32.9■■■□□ 2.86
PSMD8-204ENST00000591216 DNAJC5Q9H3Z4 198 aa32.88■■■□□ 2.85
PSMD8-204ENST00000591216 PRDM2Q13029 1718 aa32.79■■■□□ 2.84
PSMD8-204ENST00000591216 URB2Q14146 1524 aaKnown RBP32.69■■■□□ 2.82
PSMD8-204ENST00000591216 SUPT5HO00267 1087 aaKnown RBP32.43■■■□□ 2.78
PSMD8-204ENST00000591216 TOPBP1Q92547 1522 aa32.41■■■□□ 2.78
PSMD8-204ENST00000591216 ABCC8Q09428 1581 aa32.36■■■□□ 2.77
PSMD8-204ENST00000591216 DNMBPQ6XZF7 1577 aa32.32■■■□□ 2.76
PSMD8-204ENST00000591216 IFT140Q96RY7 1462 aa32.28■■■□□ 2.76
PSMD8-204ENST00000591216 ZNF608Q9ULD9 1512 aaPredicted RBP32.2■■■□□ 2.74
PSMD8-204ENST00000591216 TARBP1Q13395 1621 aaKnown RBP32.11■■■□□ 2.73
PSMD8-204ENST00000591216 POLA1P09884 1462 aaPredicted RBP32.11■■■□□ 2.73
PSMD8-204ENST00000591216 CUX1P39880 1505 aa32.05■■■□□ 2.72
PSMD8-204ENST00000591216 EIF4G3O43432 1585 aaKnown RBP32.02■■■□□ 2.72
PSMD8-204ENST00000591216 RAD54L2Q9Y4B4 1467 aa31.99■■■□□ 2.71
PSMD8-204ENST00000591216 OSCARQ8IYS5 282 aa31.98■■■□□ 2.71
PSMD8-204ENST00000591216 FGD5Q6ZNL6 1462 aa31.97■■■□□ 2.71
PSMD8-204ENST00000591216 SOGA1O94964 1423 aa31.96■■■□□ 2.71
PSMD8-204ENST00000591216 AQRO60306 1485 aaKnown RBP eCLIP31.96■■■□□ 2.719e-9■■■■■ 35.9
PSMD8-204ENST00000591216 TDRD9Q8NDG6 1382 aaKnown RBP31.83■■■□□ 2.69
PSMD8-204ENST00000591216 WDR97A6NE52 1622 aa31.78■■■□□ 2.68
PSMD8-204ENST00000591216 CHD1O14646 1710 aa31.69■■■□□ 2.66
PSMD8-204ENST00000591216 BIVM-ERCC5R4GMW8 1640 aa31.67■■■□□ 2.66
PSMD8-204ENST00000591216 WRNQ14191 1432 aaPredicted RBP eCLIP31.66■■■□□ 2.66
PSMD8-204ENST00000591216 TOP2BQ02880 1626 aa31.66■■■□□ 2.66
PSMD8-204ENST00000591216 ABCA10Q8WWZ4 1543 aa31.65■■■□□ 2.66
PSMD8-204ENST00000591216 SYNJ1O43426 1573 aa31.64■■■□□ 2.66
PSMD8-204ENST00000591216 GRIN2BQ13224 1484 aa31.62■■■□□ 2.65
PSMD8-204ENST00000591216 SNAPC4Q5SXM2 1469 aa31.62■■■□□ 2.65
PSMD8-204ENST00000591216 GAPVD1Q14C86 1478 aa31.58■■■□□ 2.65
PSMD8-204ENST00000591216 FBLN2P98095 1184 aa31.57■■■□□ 2.64
PSMD8-204ENST00000591216 MAGI1Q96QZ7 1491 aaPredicted RBP31.57■■■□□ 2.64
PSMD8-204ENST00000591216 ABCA5Q8WWZ7 1642 aa31.57■■■□□ 2.64
PSMD8-204ENST00000591216 TRIM41Q8WV44 630 aa31.54■■■□□ 2.64
PSMD8-204ENST00000591216 PBRM1Q86U86 1689 aa31.53■■■□□ 2.64
PSMD8-204ENST00000591216 RIMBP3CA6NJZ7 1639 aa31.53■■■□□ 2.64
PSMD8-204ENST00000591216 RIMBP3BA6NNM3 1639 aa31.53■■■□□ 2.64
PSMD8-204ENST00000591216 RIMBP3Q9UFD9 1639 aa31.53■■■□□ 2.64
PSMD8-204ENST00000591216 ARHGEF11O15085 1522 aa31.46■■■□□ 2.63
PSMD8-204ENST00000591216 CHMP7Q8WUX9 453 aaPredicted RBP31.46■■■□□ 2.63
PSMD8-204ENST00000591216 SYNJ2O15056 1496 aa31.46■■■□□ 2.63
PSMD8-204ENST00000591216 CLASP1Q7Z460 1538 aa31.37■■■□□ 2.61
PSMD8-204ENST00000591216 ADAMTS12P58397 1594 aa31.26■■■□□ 2.6
PSMD8-204ENST00000591216 ERICH3Q5RHP9 1530 aa31.25■■■□□ 2.59
PSMD8-204ENST00000591216 GRIN2AQ12879 1464 aa31.22■■■□□ 2.59
PSMD8-204ENST00000591216 FHAD1B1AJZ9 1412 aa31.21■■■□□ 2.59
PSMD8-204ENST00000591216 ARAP1Q96P48 1450 aa31.21■■■□□ 2.59
PSMD8-204ENST00000591216 CYB5RLQ6IPT4 315 aa31.19■■■□□ 2.58
PSMD8-204ENST00000591216 NUP160Q12769 1436 aa31.12■■■□□ 2.57
PSMD8-204ENST00000591216 CEP170Q5SW79 1584 aa31.1■■■□□ 2.57
PSMD8-204ENST00000591216 KIF27Q86VH2 1401 aa31.02■■■□□ 2.56
PSMD8-204ENST00000591216 IGF1RP08069 1367 aa31.02■■■□□ 2.56
PSMD8-204ENST00000591216 SHROOM2Q13796 1616 aa30.94■■■□□ 2.54
PSMD8-204ENST00000591216 ERCC6L2Q5T890 1561 aa30.93■■■□□ 2.54
PSMD8-204ENST00000591216 CUL7Q14999 1698 aa30.87■■■□□ 2.53
PSMD8-204ENST00000591216 RUSC2Q8N2Y8 1516 aa30.81■■■□□ 2.52
PSMD8-204ENST00000591216 JPH4Q96JJ6 628 aa30.8■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms