RNA–Protein interactions for RNA: ENST00000591180.5

JRK-207, Transcript of Jrk helix-turn-helix protein, humanhuman

TSL 3

Gene JRK, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
JRK-207ENST00000591180 NISCHQ9Y2I1 1504 aa46.22■■■■■ 4.99
JRK-207ENST00000591180 CCDC180Q9P1Z9 1646 aa41.32■■■■■ 4.2
JRK-207ENST00000591180 ABCC9O60706 1549 aa41.01■■■■■ 4.16
JRK-207ENST00000591180 RB1CC1Q8TDY2 1594 aa39.12■■■■□ 3.85
JRK-207ENST00000591180 NACADO15069 1562 aa38.92■■■■□ 3.82
JRK-207ENST00000591180 DCAF8L2P0C7V8 631 aa38.86■■■■□ 3.81
JRK-207ENST00000591180 MYO15BQ96JP2 1530 aa38.45■■■■□ 3.75
JRK-207ENST00000591180 UNC13AQ9UPW8 1703 aa38.41■■■■□ 3.74
JRK-207ENST00000591180 ZCCHC6Q5VYS8 1495 aaKnown RBP38.4■■■■□ 3.74
JRK-207ENST00000591180 PABPN1Q86U42 306 aaKnown RBP eCLIP38.23■■■■□ 3.71
JRK-207ENST00000591180 DNAJC5BQ9UF47 199 aa38.14■■■■□ 3.7
JRK-207ENST00000591180 DCAF1Q9Y4B6 1507 aa38.12■■■■□ 3.69
JRK-207ENST00000591180 BICRAQ9NZM4 1560 aa38.06■■■■□ 3.68
JRK-207ENST00000591180 SCRIBQ14160 1630 aa37.76■■■■□ 3.64
JRK-207ENST00000591180 SHROOM4Q9ULL8 1493 aa37.39■■■■□ 3.58
JRK-207ENST00000591180 CC2D2AQ9P2K1 1620 aa37.06■■■■□ 3.52
JRK-207ENST00000591180 EIF4G1Q04637 1599 aaKnown RBP37.05■■■■□ 3.52
JRK-207ENST00000591180 CECR2Q9BXF3 1484 aa36.84■■■■□ 3.49
JRK-207ENST00000591180 SMARCA4P51532 1647 aa36.01■■■■□ 3.36
JRK-207ENST00000591180 NCAPD3P42695 1498 aa35.92■■■■□ 3.34
JRK-207ENST00000591180 ATAD2BQ9ULI0 1458 aa35.92■■■■□ 3.34
JRK-207ENST00000591180 BAZ1AQ9NRL2 1556 aaPredicted RBP35.83■■■■□ 3.33
JRK-207ENST00000591180 SMARCA2P51531 1590 aa35.79■■■■□ 3.32
JRK-207ENST00000591180 HMGXB3Q12766 1538 aa35.72■■■■□ 3.31
JRK-207ENST00000591180 MROH2BQ7Z745 1585 aa35.68■■■■□ 3.3
JRK-207ENST00000591180 PEG3Q9GZU2 1588 aa35.6■■■■□ 3.29
JRK-207ENST00000591180 BAZ1BQ9UIG0 1483 aaKnown RBP35.59■■■■□ 3.29
JRK-207ENST00000591180 NESP48681 1621 aa35.37■■■■□ 3.25
JRK-207ENST00000591180 WIZO95785 1651 aa35.31■■■■□ 3.24
JRK-207ENST00000591180 ERCC6Q03468 1493 aa35.31■■■■□ 3.24
JRK-207ENST00000591180 LAMC3Q9Y6N6 1575 aa35.08■■■■□ 3.21
JRK-207ENST00000591180 CUX2O14529 1486 aa35.08■■■■□ 3.21
JRK-207ENST00000591180 RSF1Q96T23 1441 aaPredicted RBP35.02■■■■□ 3.2
JRK-207ENST00000591180 KIF21AQ7Z4S6 1674 aa34.95■■■■□ 3.19
JRK-207ENST00000591180 THOC2Q8NI27 1593 aaKnown RBP34.92■■■■□ 3.18
JRK-207ENST00000591180 CADPSQ9ULU8 1353 aa34.85■■■■□ 3.17
JRK-207ENST00000591180 TOP2AP11388 1531 aaKnown RBP34.81■■■■□ 3.16
JRK-207ENST00000591180 PDS5BQ9NTI5 1447 aa34.81■■■■□ 3.16
JRK-207ENST00000591180 DNAJC5Q9H3Z4 198 aa34.63■■■■□ 3.13
JRK-207ENST00000591180 MRC2Q9UBG0 1479 aa34.55■■■■□ 3.12
JRK-207ENST00000591180 CFTRP13569 1480 aa34.54■■■■□ 3.12
JRK-207ENST00000591180 FANCD2Q9BXW9 1451 aa34.5■■■■□ 3.11
JRK-207ENST00000591180 CEP164Q9UPV0 1460 aa34.49■■■■□ 3.11
JRK-207ENST00000591180 WDR62O43379 1518 aa34.47■■■■□ 3.11
JRK-207ENST00000591180 CCDC88BA6NC98 1476 aa34.41■■■■□ 3.1
JRK-207ENST00000591180 PRDM2Q13029 1718 aa34.34■■■■□ 3.09
JRK-207ENST00000591180 URB2Q14146 1524 aaKnown RBP34.24■■■■□ 3.07
JRK-207ENST00000591180 TOPBP1Q92547 1522 aa33.91■■■■□ 3.02
JRK-207ENST00000591180 DNMBPQ6XZF7 1577 aa33.81■■■■□ 3
JRK-207ENST00000591180 SUPT5HO00267 1087 aaKnown RBP33.78■■■■□ 3
JRK-207ENST00000591180 ZNF608Q9ULD9 1512 aaPredicted RBP33.77■■■■□ 3
JRK-207ENST00000591180 IFT140Q96RY7 1462 aa33.76■■■□□ 2.99
JRK-207ENST00000591180 ABCC8Q09428 1581 aa33.74■■■□□ 2.99
JRK-207ENST00000591180 TARBP1Q13395 1621 aaKnown RBP33.61■■■□□ 2.97
JRK-207ENST00000591180 EIF4G3O43432 1585 aaKnown RBP33.6■■■□□ 2.97
JRK-207ENST00000591180 POLA1P09884 1462 aaPredicted RBP33.58■■■□□ 2.97
JRK-207ENST00000591180 OSCARQ8IYS5 282 aa33.51■■■□□ 2.95
JRK-207ENST00000591180 RAD54L2Q9Y4B4 1467 aa33.5■■■□□ 2.95
JRK-207ENST00000591180 CUX1P39880 1505 aa33.49■■■□□ 2.95
JRK-207ENST00000591180 AQRO60306 1485 aaKnown RBP eCLIP33.48■■■□□ 2.95
JRK-207ENST00000591180 FGD5Q6ZNL6 1462 aa33.44■■■□□ 2.94
JRK-207ENST00000591180 SOGA1O94964 1423 aa33.39■■■□□ 2.94
JRK-207ENST00000591180 TRIM41Q8WV44 630 aa33.36■■■□□ 2.93
JRK-207ENST00000591180 CHD1O14646 1710 aa33.33■■■□□ 2.93
JRK-207ENST00000591180 TDRD9Q8NDG6 1382 aaKnown RBP33.33■■■□□ 2.93
JRK-207ENST00000591180 WDR97A6NE52 1622 aa33.24■■■□□ 2.91
JRK-207ENST00000591180 RIMBP3CA6NJZ7 1639 aa33.18■■■□□ 2.9
JRK-207ENST00000591180 RIMBP3BA6NNM3 1639 aa33.18■■■□□ 2.9
JRK-207ENST00000591180 RIMBP3Q9UFD9 1639 aa33.18■■■□□ 2.9
JRK-207ENST00000591180 FBLN2P98095 1184 aa33.15■■■□□ 2.9
JRK-207ENST00000591180 SNAPC4Q5SXM2 1469 aa33.15■■■□□ 2.9
JRK-207ENST00000591180 ARHGEF11O15085 1522 aa33.07■■■□□ 2.89
JRK-207ENST00000591180 PBRM1Q86U86 1689 aa33.07■■■□□ 2.89
JRK-207ENST00000591180 SYNJ1O43426 1573 aa33.06■■■□□ 2.88
JRK-207ENST00000591180 BIVM-ERCC5R4GMW8 1640 aa33.06■■■□□ 2.88
JRK-207ENST00000591180 GRIN2BQ13224 1484 aa33.05■■■□□ 2.88
JRK-207ENST00000591180 ABCA10Q8WWZ4 1543 aa33.03■■■□□ 2.88
JRK-207ENST00000591180 TOP2BQ02880 1626 aa33.02■■■□□ 2.88
JRK-207ENST00000591180 ABCA5Q8WWZ7 1642 aa33.02■■■□□ 2.88
JRK-207ENST00000591180 WRNQ14191 1432 aaPredicted RBP eCLIP33.02■■■□□ 2.88
JRK-207ENST00000591180 GAPVD1Q14C86 1478 aa33.01■■■□□ 2.88
JRK-207ENST00000591180 MAGI1Q96QZ7 1491 aaPredicted RBP33.01■■■□□ 2.88
JRK-207ENST00000591180 CHMP7Q8WUX9 453 aaPredicted RBP32.91■■■□□ 2.86
JRK-207ENST00000591180 SYNJ2O15056 1496 aa32.91■■■□□ 2.86
JRK-207ENST00000591180 CLASP1Q7Z460 1538 aa32.88■■■□□ 2.85
JRK-207ENST00000591180 ARAP1Q96P48 1450 aa32.8■■■□□ 2.84
JRK-207ENST00000591180 CYB5RLQ6IPT4 315 aa32.77■■■□□ 2.84
JRK-207ENST00000591180 ADAMTS12P58397 1594 aa32.74■■■□□ 2.83
JRK-207ENST00000591180 GRIN2AQ12879 1464 aa32.67■■■□□ 2.82
JRK-207ENST00000591180 ERICH3Q5RHP9 1530 aa32.61■■■□□ 2.81
JRK-207ENST00000591180 CEP170Q5SW79 1584 aa32.59■■■□□ 2.81
JRK-207ENST00000591180 FHAD1B1AJZ9 1412 aa32.58■■■□□ 2.81
JRK-207ENST00000591180 NUP160Q12769 1436 aa32.52■■■□□ 2.8
JRK-207ENST00000591180 ERCC6L2Q5T890 1561 aa32.48■■■□□ 2.79
JRK-207ENST00000591180 SHROOM2Q13796 1616 aa32.37■■■□□ 2.77
JRK-207ENST00000591180 KIF27Q86VH2 1401 aa32.33■■■□□ 2.77
JRK-207ENST00000591180 IGF1RP08069 1367 aa32.29■■■□□ 2.76
JRK-207ENST00000591180 TRHP20396 242 aaPredicted RBP32.28■■■□□ 2.76
JRK-207ENST00000591180 RUSC2Q8N2Y8 1516 aa32.27■■■□□ 2.76
JRK-207ENST00000591180 CUL7Q14999 1698 aa32.24■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms