RNA–Protein interactions for RNA: ENST00000591085.1

BECN1-217, Transcript of beclin 1, humanhuman

TSL 4

Gene BECN1, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BECN1-217ENST00000591085 NISCHQ9Y2I1 1504 aa23.58■■□□□ 1.36
BECN1-217ENST00000591085 ABCC9O60706 1549 aa21.33■■□□□ 1
BECN1-217ENST00000591085 CCDC180Q9P1Z9 1646 aa21.21■□□□□ 0.99
BECN1-217ENST00000591085 RB1CC1Q8TDY2 1594 aa20.24■□□□□ 0.83
BECN1-217ENST00000591085 DNAJC5BQ9UF47 199 aa20.19■□□□□ 0.82
BECN1-217ENST00000591085 NACADO15069 1562 aa20.09■□□□□ 0.81
BECN1-217ENST00000591085 DCAF8L2P0C7V8 631 aa19.84■□□□□ 0.77
BECN1-217ENST00000591085 PABPN1Q86U42 306 aaKnown RBP eCLIP19.82■□□□□ 0.76
BECN1-217ENST00000591085 UNC13AQ9UPW8 1703 aa19.81■□□□□ 0.76
BECN1-217ENST00000591085 MYO15BQ96JP2 1530 aa19.81■□□□□ 0.76
BECN1-217ENST00000591085 BICRAQ9NZM4 1560 aa19.72■□□□□ 0.75
BECN1-217ENST00000591085 ZCCHC6Q5VYS8 1495 aaKnown RBP19.52■□□□□ 0.72
BECN1-217ENST00000591085 DCAF1Q9Y4B6 1507 aa19.49■□□□□ 0.71
BECN1-217ENST00000591085 SHROOM4Q9ULL8 1493 aa19.42■□□□□ 0.7
BECN1-217ENST00000591085 SCRIBQ14160 1630 aa19.29■□□□□ 0.68
BECN1-217ENST00000591085 CC2D2AQ9P2K1 1620 aa19.28■□□□□ 0.68
BECN1-217ENST00000591085 CECR2Q9BXF3 1484 aa19.24■□□□□ 0.67
BECN1-217ENST00000591085 EIF4G1Q04637 1599 aaKnown RBP19.21■□□□□ 0.67
BECN1-217ENST00000591085 DNAJC5Q9H3Z4 198 aa18.63■□□□□ 0.57
BECN1-217ENST00000591085 NCAPD3P42695 1498 aa18.57■□□□□ 0.56
BECN1-217ENST00000591085 ATAD2BQ9ULI0 1458 aa18.48■□□□□ 0.55
BECN1-217ENST00000591085 CUX2O14529 1486 aa18.46■□□□□ 0.55
BECN1-217ENST00000591085 SMARCA4P51532 1647 aa18.41■□□□□ 0.54
BECN1-217ENST00000591085 HMGXB3Q12766 1538 aa18.41■□□□□ 0.54
BECN1-217ENST00000591085 ERCC6Q03468 1493 aa18.39■□□□□ 0.54
BECN1-217ENST00000591085 SMARCA2P51531 1590 aa18.39■□□□□ 0.53
BECN1-217ENST00000591085 NESP48681 1621 aa18.31■□□□□ 0.52
BECN1-217ENST00000591085 BAZ1AQ9NRL2 1556 aaPredicted RBP18.3■□□□□ 0.52
BECN1-217ENST00000591085 PEG3Q9GZU2 1588 aa18.27■□□□□ 0.52
BECN1-217ENST00000591085 BAZ1BQ9UIG0 1483 aaKnown RBP18.26■□□□□ 0.51
BECN1-217ENST00000591085 MROH2BQ7Z745 1585 aa18.17■□□□□ 0.5
BECN1-217ENST00000591085 THOC2Q8NI27 1593 aaKnown RBP18.17■□□□□ 0.5
BECN1-217ENST00000591085 LAMC3Q9Y6N6 1575 aa18.15■□□□□ 0.5
BECN1-217ENST00000591085 KIF21AQ7Z4S6 1674 aa18.04■□□□□ 0.48
BECN1-217ENST00000591085 PDS5BQ9NTI5 1447 aa18.02■□□□□ 0.48
BECN1-217ENST00000591085 CADPSQ9ULU8 1353 aa17.97■□□□□ 0.47
BECN1-217ENST00000591085 WIZO95785 1651 aa17.92■□□□□ 0.46
BECN1-217ENST00000591085 MRC2Q9UBG0 1479 aa17.89■□□□□ 0.45
BECN1-217ENST00000591085 WDR62O43379 1518 aa17.88■□□□□ 0.45
BECN1-217ENST00000591085 CEP164Q9UPV0 1460 aa17.78■□□□□ 0.44
BECN1-217ENST00000591085 FANCD2Q9BXW9 1451 aa17.76■□□□□ 0.43
BECN1-217ENST00000591085 CFTRP13569 1480 aa17.75■□□□□ 0.43
BECN1-217ENST00000591085 RSF1Q96T23 1441 aaPredicted RBP17.74■□□□□ 0.43
BECN1-217ENST00000591085 TOP2AP11388 1531 aaKnown RBP17.69■□□□□ 0.42
BECN1-217ENST00000591085 TRIM41Q8WV44 630 aa17.67■□□□□ 0.42
BECN1-217ENST00000591085 URB2Q14146 1524 aaKnown RBP17.65■□□□□ 0.42
BECN1-217ENST00000591085 OSCARQ8IYS5 282 aa17.56■□□□□ 0.4
BECN1-217ENST00000591085 PRDM2Q13029 1718 aa17.53■□□□□ 0.4
BECN1-217ENST00000591085 CCDC88BA6NC98 1476 aa17.49■□□□□ 0.39
BECN1-217ENST00000591085 ZNF608Q9ULD9 1512 aaPredicted RBP17.45■□□□□ 0.38
BECN1-217ENST00000591085 IFT140Q96RY7 1462 aa17.44■□□□□ 0.38
BECN1-217ENST00000591085 TOPBP1Q92547 1522 aa17.42■□□□□ 0.38
BECN1-217ENST00000591085 RIMBP3CA6NJZ7 1639 aa17.38■□□□□ 0.37
BECN1-217ENST00000591085 RIMBP3BA6NNM3 1639 aa17.38■□□□□ 0.37
BECN1-217ENST00000591085 RIMBP3Q9UFD9 1639 aa17.38■□□□□ 0.37
BECN1-217ENST00000591085 ABCC8Q09428 1581 aa17.36■□□□□ 0.37
BECN1-217ENST00000591085 EIF4G3O43432 1585 aaKnown RBP17.33■□□□□ 0.37
BECN1-217ENST00000591085 DNMBPQ6XZF7 1577 aa17.33■□□□□ 0.37
BECN1-217ENST00000591085 ARHGEF11O15085 1522 aa17.31■□□□□ 0.36
BECN1-217ENST00000591085 TARBP1Q13395 1621 aaKnown RBP17.29■□□□□ 0.36
BECN1-217ENST00000591085 AQRO60306 1485 aaKnown RBP eCLIP17.25■□□□□ 0.353e-9■■■■□ 25.8
BECN1-217ENST00000591085 POLA1P09884 1462 aaPredicted RBP17.24■□□□□ 0.35
BECN1-217ENST00000591085 CHD1O14646 1710 aa17.21■□□□□ 0.35
BECN1-217ENST00000591085 RAD54L2Q9Y4B4 1467 aa17.17■□□□□ 0.34
BECN1-217ENST00000591085 CYB5RLQ6IPT4 315 aa17.15■□□□□ 0.34
BECN1-217ENST00000591085 ARAP1Q96P48 1450 aa17.15■□□□□ 0.34
BECN1-217ENST00000591085 SOGA1O94964 1423 aa17.13■□□□□ 0.33
BECN1-217ENST00000591085 TDRD9Q8NDG6 1382 aaKnown RBP17.12■□□□□ 0.33
BECN1-217ENST00000591085 FBLN2P98095 1184 aa17.1■□□□□ 0.33
BECN1-217ENST00000591085 FGD5Q6ZNL6 1462 aa17.1■□□□□ 0.33
BECN1-217ENST00000591085 WDR97A6NE52 1622 aa17.1■□□□□ 0.33
BECN1-217ENST00000591085 CUX1P39880 1505 aa17.07■□□□□ 0.32
BECN1-217ENST00000591085 SNAPC4Q5SXM2 1469 aa17.07■□□□□ 0.32
BECN1-217ENST00000591085 CLASP1Q7Z460 1538 aa17.06■□□□□ 0.32
BECN1-217ENST00000591085 MAGI1Q96QZ7 1491 aaPredicted RBP17.03■□□□□ 0.32
BECN1-217ENST00000591085 GRIN2BQ13224 1484 aa17■□□□□ 0.31
BECN1-217ENST00000591085 SYNJ1O43426 1573 aa16.98■□□□□ 0.31
BECN1-217ENST00000591085 SYNJ2O15056 1496 aa16.98■□□□□ 0.31
BECN1-217ENST00000591085 CHMP7Q8WUX9 453 aaPredicted RBP16.97■□□□□ 0.31
BECN1-217ENST00000591085 TRHP20396 242 aaPredicted RBP16.96■□□□□ 0.31
BECN1-217ENST00000591085 GAPVD1Q14C86 1478 aa16.93■□□□□ 0.3
BECN1-217ENST00000591085 PBRM1Q86U86 1689 aa16.91■□□□□ 0.3
BECN1-217ENST00000591085 ABCA10Q8WWZ4 1543 aa16.91■□□□□ 0.3
BECN1-217ENST00000591085 ABCA5Q8WWZ7 1642 aa16.9■□□□□ 0.3
BECN1-217ENST00000591085 GRIN2AQ12879 1464 aa16.8■□□□□ 0.28
BECN1-217ENST00000591085 WRNQ14191 1432 aaPredicted RBP eCLIP16.79■□□□□ 0.28
BECN1-217ENST00000591085 NUP160Q12769 1436 aa16.78■□□□□ 0.28
BECN1-217ENST00000591085 ADAMTS12P58397 1594 aa16.77■□□□□ 0.28
BECN1-217ENST00000591085 ERCC6L2Q5T890 1561 aa16.77■□□□□ 0.28
BECN1-217ENST00000591085 TOP2BQ02880 1626 aa16.75■□□□□ 0.27
BECN1-217ENST00000591085 BIVM-ERCC5R4GMW8 1640 aa16.75■□□□□ 0.27
BECN1-217ENST00000591085 CEP170Q5SW79 1584 aa16.75■□□□□ 0.27
BECN1-217ENST00000591085 SUPT5HO00267 1087 aaKnown RBP16.74■□□□□ 0.27
BECN1-217ENST00000591085 SHROOM2Q13796 1616 aa16.71■□□□□ 0.27
BECN1-217ENST00000591085 FHAD1B1AJZ9 1412 aa16.7■□□□□ 0.26
BECN1-217ENST00000591085 ERICH3Q5RHP9 1530 aa16.68■□□□□ 0.26
BECN1-217ENST00000591085 PRG4Q92954 1404 aaPredicted RBP16.58■□□□□ 0.24
BECN1-217ENST00000591085 KIF13AQ9H1H9 1805 aa16.55■□□□□ 0.24
BECN1-217ENST00000591085 AEBP2Q6ZN18 517 aaPredicted RBP16.55■□□□□ 0.24
BECN1-217ENST00000591085 JPH4Q96JJ6 628 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms