RNA–Protein interactions for RNA: ENST00000591043.1

GCDH-214, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 5

Gene GCDH, Length 1,764 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-214ENST00000591043 NISCHQ9Y2I1 1504 aa44.57■■■■■ 4.73
GCDH-214ENST00000591043 CCDC180Q9P1Z9 1646 aa38.71■■■■□ 3.79
GCDH-214ENST00000591043 ZCCHC6Q5VYS8 1495 aaKnown RBP37.58■■■■□ 3.61
GCDH-214ENST00000591043 DCAF1Q9Y4B6 1507 aa36.98■■■■□ 3.51
GCDH-214ENST00000591043 SHROOM4Q9ULL8 1493 aa36.6■■■■□ 3.45
GCDH-214ENST00000591043 DCAF8L2P0C7V8 631 aa36.41■■■■□ 3.42
GCDH-214ENST00000591043 ABCC9O60706 1549 aa36.36■■■■□ 3.41
GCDH-214ENST00000591043 MYO15BQ96JP2 1530 aa36.32■■■■□ 3.41
GCDH-214ENST00000591043 NACADO15069 1562 aa35.85■■■■□ 3.33
GCDH-214ENST00000591043 SUPT5HO00267 1087 aaKnown RBP35.58■■■■□ 3.29
GCDH-214ENST00000591043 SCRIBQ14160 1630 aa35.5■■■■□ 3.27
GCDH-214ENST00000591043 RB1CC1Q8TDY2 1594 aa35.38■■■■□ 3.25
GCDH-214ENST00000591043 RSF1Q96T23 1441 aaPredicted RBP34.78■■■■□ 3.16
GCDH-214ENST00000591043 UNC13AQ9UPW8 1703 aa34.66■■■■□ 3.14
GCDH-214ENST00000591043 DNAJC5BQ9UF47 199 aa34.5■■■■□ 3.11
GCDH-214ENST00000591043 CHIC1Q5VXU3 224 aa34.46■■■■□ 3.11
GCDH-214ENST00000591043 CECR2Q9BXF3 1484 aa34.45■■■■□ 3.11
GCDH-214ENST00000591043 BAZ1AQ9NRL2 1556 aaPredicted RBP34.42■■■■□ 3.1
GCDH-214ENST00000591043 MROH2BQ7Z745 1585 aa34.39■■■■□ 3.1
GCDH-214ENST00000591043 BICRAQ9NZM4 1560 aa34.19■■■■□ 3.06
GCDH-214ENST00000591043 WIZO95785 1651 aa34.17■■■■□ 3.06
GCDH-214ENST00000591043 SMARCA4P51532 1647 aa34.15■■■■□ 3.06
GCDH-214ENST00000591043 TOP2AP11388 1531 aaKnown RBP33.91■■■■□ 3.02
GCDH-214ENST00000591043 PABPN1Q86U42 306 aaKnown RBP eCLIP33.85■■■■□ 3.01
GCDH-214ENST00000591043 PEG3Q9GZU2 1588 aa33.76■■■■□ 3
GCDH-214ENST00000591043 SMARCA2P51531 1590 aa33.58■■■□□ 2.97
GCDH-214ENST00000591043 EIF4G1Q04637 1599 aaKnown RBP33.57■■■□□ 2.96
GCDH-214ENST00000591043 TRIM41Q8WV44 630 aa33.51■■■□□ 2.95
GCDH-214ENST00000591043 CCDC88BA6NC98 1476 aa33.49■■■□□ 2.95
GCDH-214ENST00000591043 ATAD2BQ9ULI0 1458 aa33.37■■■□□ 2.93
GCDH-214ENST00000591043 BAZ1BQ9UIG0 1483 aaKnown RBP33.26■■■□□ 2.92
GCDH-214ENST00000591043 HMGXB3Q12766 1538 aa33.09■■■□□ 2.89
GCDH-214ENST00000591043 LOC105371045A0A1W2PR82 267 aa33.06■■■□□ 2.88
GCDH-214ENST00000591043 NCAPD3P42695 1498 aa33.03■■■□□ 2.88
GCDH-214ENST00000591043 ABCC8Q09428 1581 aa32.95■■■□□ 2.87
GCDH-214ENST00000591043 FAM9AQ8IZU1 332 aaPredicted RBP32.78■■■□□ 2.84
GCDH-214ENST00000591043 EEA1Q15075 1411 aa32.77■■■□□ 2.84
GCDH-214ENST00000591043 WRNQ14191 1432 aaPredicted RBP eCLIP32.75■■■□□ 2.83
GCDH-214ENST00000591043 CC2D2AQ9P2K1 1620 aa32.74■■■□□ 2.83
GCDH-214ENST00000591043 SYNJ1O43426 1573 aa32.56■■■□□ 2.8
GCDH-214ENST00000591043 PRDM2Q13029 1718 aa32.5■■■□□ 2.79
GCDH-214ENST00000591043 TOP2BQ02880 1626 aa32.46■■■□□ 2.79
GCDH-214ENST00000591043 CFTRP13569 1480 aa32.46■■■□□ 2.79
GCDH-214ENST00000591043 BIVM-ERCC5R4GMW8 1640 aa32.45■■■□□ 2.79
GCDH-214ENST00000591043 SOGA1O94964 1423 aa32.45■■■□□ 2.79
GCDH-214ENST00000591043 CSRNP3Q8WYN3 585 aa32.37■■■□□ 2.77
GCDH-214ENST00000591043 PCGF6Q9BYE7 350 aa32.3■■■□□ 2.76
GCDH-214ENST00000591043 TRIM26Q12899 539 aaPredicted RBP32.29■■■□□ 2.76
GCDH-214ENST00000591043 TNIKQ9UKE5 1360 aa32.26■■■□□ 2.76
GCDH-214ENST00000591043 KIF21BO75037 1637 aa32.26■■■□□ 2.75
GCDH-214ENST00000591043 GOLGA3Q08378 1498 aa32.26■■■□□ 2.75
GCDH-214ENST00000591043 RUSC2Q8N2Y8 1516 aa32.25■■■□□ 2.75
GCDH-214ENST00000591043 CEP164Q9UPV0 1460 aa32.21■■■□□ 2.75
GCDH-214ENST00000591043 CADPSQ9ULU8 1353 aa32.19■■■□□ 2.74
GCDH-214ENST00000591043 EHMT2Q96KQ7 1210 aa32.18■■■□□ 2.74
GCDH-214ENST00000591043 CUX1P39880 1505 aa32.14■■■□□ 2.73
GCDH-214ENST00000591043 CEP162Q5TB80 1403 aa32.08■■■□□ 2.73
GCDH-214ENST00000591043 HRCP23327 699 aa32.01■■■□□ 2.71
GCDH-214ENST00000591043 UBTFP17480 764 aaKnown RBP31.98■■■□□ 2.71
GCDH-214ENST00000591043 ERICH3Q5RHP9 1530 aa31.94■■■□□ 2.7
GCDH-214ENST00000591043 KIF27Q86VH2 1401 aa31.91■■■□□ 2.7
GCDH-214ENST00000591043 LAMC3Q9Y6N6 1575 aa31.86■■■□□ 2.69
GCDH-214ENST00000591043 FANCD2Q9BXW9 1451 aa31.83■■■□□ 2.69
GCDH-214ENST00000591043 PRXQ9BXM0 1461 aa31.82■■■□□ 2.68
GCDH-214ENST00000591043 RAPGEF2Q9Y4G8 1499 aa31.8■■■□□ 2.68
GCDH-214ENST00000591043 DNAJC5Q9H3Z4 198 aa31.79■■■□□ 2.68
GCDH-214ENST00000591043 DNMBPQ6XZF7 1577 aa31.74■■■□□ 2.67
GCDH-214ENST00000591043 CLIP1P30622 1438 aa31.71■■■□□ 2.67
GCDH-214ENST00000591043 FGD5Q6ZNL6 1462 aa31.69■■■□□ 2.66
GCDH-214ENST00000591043 CUX2O14529 1486 aa31.6■■■□□ 2.65
GCDH-214ENST00000591043 NESP48681 1621 aa31.58■■■□□ 2.65
GCDH-214ENST00000591043 TOPBP1Q92547 1522 aa31.57■■■□□ 2.64
GCDH-214ENST00000591043 VPS8Q8N3P4 1428 aa31.56■■■□□ 2.64
GCDH-214ENST00000591043 PDS5BQ9NTI5 1447 aa31.56■■■□□ 2.64
GCDH-214ENST00000591043 ABCA10Q8WWZ4 1543 aa31.49■■■□□ 2.63
GCDH-214ENST00000591043 ZEB1P37275 1124 aaPredicted RBP31.48■■■□□ 2.63
GCDH-214ENST00000591043 IGF1RP08069 1367 aa31.47■■■□□ 2.63
GCDH-214ENST00000591043 POLA1P09884 1462 aaPredicted RBP31.44■■■□□ 2.62
GCDH-214ENST00000591043 PPARGC1BQ86YN6 1023 aaKnown RBP31.38■■■□□ 2.61
GCDH-214ENST00000591043 URB2Q14146 1524 aaKnown RBP31.36■■■□□ 2.61
GCDH-214ENST00000591043 CARMIL1Q5VZK9 1371 aa31.36■■■□□ 2.61
GCDH-214ENST00000591043 WDR97A6NE52 1622 aa31.35■■■□□ 2.61
GCDH-214ENST00000591043 ERCC6Q03468 1493 aa31.35■■■□□ 2.61
GCDH-214ENST00000591043 CUL7Q14999 1698 aa31.34■■■□□ 2.61
GCDH-214ENST00000591043 KIF21AQ7Z4S6 1674 aa31.34■■■□□ 2.61
GCDH-214ENST00000591043 APLP2Q06481 763 aa31.29■■■□□ 2.6
GCDH-214ENST00000591043 ARAP1Q96P48 1450 aa31.29■■■□□ 2.6
GCDH-214ENST00000591043 RAD54L2Q9Y4B4 1467 aa31.28■■■□□ 2.6
GCDH-214ENST00000591043 ABCA5Q8WWZ7 1642 aa31.18■■■□□ 2.58
GCDH-214ENST00000591043 ARHGAP35Q9NRY4 1499 aa31.17■■■□□ 2.58
GCDH-214ENST00000591043 RANGAP1P46060 587 aaPredicted RBP31.1■■■□□ 2.57
GCDH-214ENST00000591043 MRC2Q9UBG0 1479 aa31.09■■■□□ 2.57
GCDH-214ENST00000591043 CTTNBP2Q8WZ74 1663 aa31.08■■■□□ 2.57
GCDH-214ENST00000591043 TARBP1Q13395 1621 aaKnown RBP31.07■■■□□ 2.56
GCDH-214ENST00000591043 GAPVD1Q14C86 1478 aa31.05■■■□□ 2.56
GCDH-214ENST00000591043 EFCAB5A4FU69 1503 aa31.02■■■□□ 2.56
GCDH-214ENST00000591043 TTBK1Q5TCY1 1321 aaPredicted RBP31.01■■■□□ 2.55
GCDH-214ENST00000591043 MAP3K1Q13233 1512 aa31■■■□□ 2.55
GCDH-214ENST00000591043 FHAD1B1AJZ9 1412 aa30.95■■■□□ 2.55
GCDH-214ENST00000591043 WDR62O43379 1518 aa30.91■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms