RNA–Protein interactions for RNA: ENST00000591004.1

SMIM22-208, Transcript of small integral membrane protein 22, humanhuman

TSL 3

Gene SMIM22, Length 862 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM22-208ENST00000591004 NISCHQ9Y2I1 1504 aa37.55■■■■□ 3.6
SMIM22-208ENST00000591004 CCDC180Q9P1Z9 1646 aa33.41■■■□□ 2.94
SMIM22-208ENST00000591004 ABCC9O60706 1549 aa32.76■■■□□ 2.83
SMIM22-208ENST00000591004 RB1CC1Q8TDY2 1594 aa31.48■■■□□ 2.63
SMIM22-208ENST00000591004 DCAF8L2P0C7V8 631 aa31.48■■■□□ 2.63
SMIM22-208ENST00000591004 NACADO15069 1562 aa31.42■■■□□ 2.62
SMIM22-208ENST00000591004 ZCCHC6Q5VYS8 1495 aaKnown RBP31.27■■■□□ 2.6
SMIM22-208ENST00000591004 MYO15BQ96JP2 1530 aa31.18■■■□□ 2.58
SMIM22-208ENST00000591004 DCAF1Q9Y4B6 1507 aa31.03■■■□□ 2.56
SMIM22-208ENST00000591004 UNC13AQ9UPW8 1703 aa30.78■■■□□ 2.52
SMIM22-208ENST00000591004 PABPN1Q86U42 306 aaKnown RBP eCLIP30.61■■■□□ 2.49
SMIM22-208ENST00000591004 SCRIBQ14160 1630 aa30.52■■■□□ 2.48
SMIM22-208ENST00000591004 BICRAQ9NZM4 1560 aa30.5■■■□□ 2.47
SMIM22-208ENST00000591004 SHROOM4Q9ULL8 1493 aa30.16■■■□□ 2.42
SMIM22-208ENST00000591004 DNAJC5BQ9UF47 199 aa30.07■■■□□ 2.4
SMIM22-208ENST00000591004 EIF4G1Q04637 1599 aaKnown RBP29.72■■■□□ 2.35
SMIM22-208ENST00000591004 CC2D2AQ9P2K1 1620 aa29.62■■■□□ 2.33
SMIM22-208ENST00000591004 CECR2Q9BXF3 1484 aa29.42■■■□□ 2.3
SMIM22-208ENST00000591004 SMARCA4P51532 1647 aa29.16■■■□□ 2.26
SMIM22-208ENST00000591004 BAZ1AQ9NRL2 1556 aaPredicted RBP29.12■■■□□ 2.25
SMIM22-208ENST00000591004 ATAD2BQ9ULI0 1458 aa28.99■■■□□ 2.23
SMIM22-208ENST00000591004 NCAPD3P42695 1498 aa28.97■■■□□ 2.23
SMIM22-208ENST00000591004 SMARCA2P51531 1590 aa28.97■■■□□ 2.23
SMIM22-208ENST00000591004 MROH2BQ7Z745 1585 aa28.95■■■□□ 2.22
SMIM22-208ENST00000591004 HMGXB3Q12766 1538 aa28.84■■■□□ 2.21
SMIM22-208ENST00000591004 PEG3Q9GZU2 1588 aa28.84■■■□□ 2.21
SMIM22-208ENST00000591004 BAZ1BQ9UIG0 1483 aaKnown RBP28.78■■■□□ 2.2
SMIM22-208ENST00000591004 WIZO95785 1651 aa28.66■■■□□ 2.18
SMIM22-208ENST00000591004 RSF1Q96T23 1441 aaPredicted RBP28.6■■■□□ 2.17
SMIM22-208ENST00000591004 TOP2AP11388 1531 aaKnown RBP28.33■■■□□ 2.13
SMIM22-208ENST00000591004 NESP48681 1621 aa28.32■■■□□ 2.12
SMIM22-208ENST00000591004 ERCC6Q03468 1493 aa28.26■■■□□ 2.11
SMIM22-208ENST00000591004 LAMC3Q9Y6N6 1575 aa28.24■■■□□ 2.11
SMIM22-208ENST00000591004 CADPSQ9ULU8 1353 aa28.14■■■□□ 2.1
SMIM22-208ENST00000591004 PDS5BQ9NTI5 1447 aa28.06■■■□□ 2.08
SMIM22-208ENST00000591004 KIF21AQ7Z4S6 1674 aa28■■■□□ 2.07
SMIM22-208ENST00000591004 CCDC88BA6NC98 1476 aa28■■■□□ 2.07
SMIM22-208ENST00000591004 CFTRP13569 1480 aa27.95■■■□□ 2.07
SMIM22-208ENST00000591004 CUX2O14529 1486 aa27.93■■■□□ 2.06
SMIM22-208ENST00000591004 SUPT5HO00267 1087 aaKnown RBP27.91■■■□□ 2.06
SMIM22-208ENST00000591004 THOC2Q8NI27 1593 aaKnown RBP27.9■■■□□ 2.06
SMIM22-208ENST00000591004 FANCD2Q9BXW9 1451 aa27.83■■■□□ 2.05
SMIM22-208ENST00000591004 CEP164Q9UPV0 1460 aa27.81■■■□□ 2.04
SMIM22-208ENST00000591004 PRDM2Q13029 1718 aa27.78■■■□□ 2.04
SMIM22-208ENST00000591004 MRC2Q9UBG0 1479 aa27.77■■■□□ 2.04
SMIM22-208ENST00000591004 WDR62O43379 1518 aa27.67■■■□□ 2.02
SMIM22-208ENST00000591004 URB2Q14146 1524 aaKnown RBP27.56■■■□□ 2
SMIM22-208ENST00000591004 TOPBP1Q92547 1522 aa27.38■■□□□ 1.97
SMIM22-208ENST00000591004 ABCC8Q09428 1581 aa27.38■■□□□ 1.97
SMIM22-208ENST00000591004 DNMBPQ6XZF7 1577 aa27.35■■□□□ 1.97
SMIM22-208ENST00000591004 IFT140Q96RY7 1462 aa27.22■■□□□ 1.95
SMIM22-208ENST00000591004 CUX1P39880 1505 aa27.16■■□□□ 1.94
SMIM22-208ENST00000591004 POLA1P09884 1462 aaPredicted RBP27.14■■□□□ 1.94
SMIM22-208ENST00000591004 DNAJC5Q9H3Z4 198 aa27.11■■□□□ 1.93
SMIM22-208ENST00000591004 ZNF608Q9ULD9 1512 aaPredicted RBP27.11■■□□□ 1.93
SMIM22-208ENST00000591004 FGD5Q6ZNL6 1462 aa27.09■■□□□ 1.93
SMIM22-208ENST00000591004 TARBP1Q13395 1621 aaKnown RBP27.08■■□□□ 1.93
SMIM22-208ENST00000591004 SOGA1O94964 1423 aa27.05■■□□□ 1.92
SMIM22-208ENST00000591004 RAD54L2Q9Y4B4 1467 aa27.05■■□□□ 1.92
SMIM22-208ENST00000591004 EIF4G3O43432 1585 aaKnown RBP27.01■■□□□ 1.91
SMIM22-208ENST00000591004 WRNQ14191 1432 aaPredicted RBP eCLIP26.98■■□□□ 1.91
SMIM22-208ENST00000591004 AQRO60306 1485 aaKnown RBP eCLIP26.95■■□□□ 1.91
SMIM22-208ENST00000591004 TOP2BQ02880 1626 aa26.92■■□□□ 1.9
SMIM22-208ENST00000591004 BIVM-ERCC5R4GMW8 1640 aa26.92■■□□□ 1.9
SMIM22-208ENST00000591004 SYNJ1O43426 1573 aa26.92■■□□□ 1.9
SMIM22-208ENST00000591004 TDRD9Q8NDG6 1382 aaKnown RBP26.9■■□□□ 1.9
SMIM22-208ENST00000591004 WDR97A6NE52 1622 aa26.86■■□□□ 1.89
SMIM22-208ENST00000591004 ABCA10Q8WWZ4 1543 aa26.8■■□□□ 1.88
SMIM22-208ENST00000591004 OSCARQ8IYS5 282 aa26.79■■□□□ 1.88
SMIM22-208ENST00000591004 GAPVD1Q14C86 1478 aa26.74■■□□□ 1.87
SMIM22-208ENST00000591004 GRIN2BQ13224 1484 aa26.73■■□□□ 1.87
SMIM22-208ENST00000591004 SNAPC4Q5SXM2 1469 aa26.71■■□□□ 1.87
SMIM22-208ENST00000591004 ABCA5Q8WWZ7 1642 aa26.71■■□□□ 1.87
SMIM22-208ENST00000591004 PBRM1Q86U86 1689 aa26.7■■□□□ 1.87
SMIM22-208ENST00000591004 CHD1O14646 1710 aa26.69■■□□□ 1.86
SMIM22-208ENST00000591004 FBLN2P98095 1184 aa26.68■■□□□ 1.86
SMIM22-208ENST00000591004 MAGI1Q96QZ7 1491 aaPredicted RBP26.66■■□□□ 1.86
SMIM22-208ENST00000591004 CHMP7Q8WUX9 453 aaPredicted RBP26.58■■□□□ 1.85
SMIM22-208ENST00000591004 SYNJ2O15056 1496 aa26.55■■□□□ 1.84
SMIM22-208ENST00000591004 ERICH3Q5RHP9 1530 aa26.49■■□□□ 1.83
SMIM22-208ENST00000591004 ADAMTS12P58397 1594 aa26.47■■□□□ 1.83
SMIM22-208ENST00000591004 KIF27Q86VH2 1401 aa26.43■■□□□ 1.82
SMIM22-208ENST00000591004 FHAD1B1AJZ9 1412 aa26.41■■□□□ 1.82
SMIM22-208ENST00000591004 GRIN2AQ12879 1464 aa26.39■■□□□ 1.82
SMIM22-208ENST00000591004 RIMBP3CA6NJZ7 1639 aa26.36■■□□□ 1.81
SMIM22-208ENST00000591004 RIMBP3BA6NNM3 1639 aa26.36■■□□□ 1.81
SMIM22-208ENST00000591004 RIMBP3Q9UFD9 1639 aa26.36■■□□□ 1.81
SMIM22-208ENST00000591004 CLASP1Q7Z460 1538 aa26.36■■□□□ 1.81
SMIM22-208ENST00000591004 TRIM41Q8WV44 630 aa26.35■■□□□ 1.81
SMIM22-208ENST00000591004 ARHGEF11O15085 1522 aa26.34■■□□□ 1.81
SMIM22-208ENST00000591004 IGF1RP08069 1367 aa26.3■■□□□ 1.8
SMIM22-208ENST00000591004 CEP170Q5SW79 1584 aa26.26■■□□□ 1.79
SMIM22-208ENST00000591004 CUL7Q14999 1698 aa26.25■■□□□ 1.79
SMIM22-208ENST00000591004 NUP160Q12769 1436 aa26.25■■□□□ 1.79
SMIM22-208ENST00000591004 RUSC2Q8N2Y8 1516 aa26.18■■□□□ 1.78
SMIM22-208ENST00000591004 CARMIL1Q5VZK9 1371 aa26.16■■□□□ 1.78
SMIM22-208ENST00000591004 CYB5RLQ6IPT4 315 aa26.13■■□□□ 1.77
SMIM22-208ENST00000591004 ARAP1Q96P48 1450 aa26.12■■□□□ 1.77
SMIM22-208ENST00000591004 SHROOM2Q13796 1616 aa26.06■■□□□ 1.76
SMIM22-208ENST00000591004 ERCC6L2Q5T890 1561 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms