RNA–Protein interactions for RNA: ENST00000590998.5

SBNO2-209, Transcript of strawberry notch homolog 2, humanhuman

TSL 4

Gene SBNO2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO2-209ENST00000590998 NISCHQ9Y2I1 1504 aa35.74■■■■□ 3.31
SBNO2-209ENST00000590998 ABCC9O60706 1549 aa32.08■■■□□ 2.73
SBNO2-209ENST00000590998 CCDC180Q9P1Z9 1646 aa32.04■■■□□ 2.72
SBNO2-209ENST00000590998 RB1CC1Q8TDY2 1594 aa30.47■■■□□ 2.47
SBNO2-209ENST00000590998 NACADO15069 1562 aa30.26■■■□□ 2.43
SBNO2-209ENST00000590998 DCAF8L2P0C7V8 631 aa30.18■■■□□ 2.42
SBNO2-209ENST00000590998 DNAJC5BQ9UF47 199 aa30.06■■■□□ 2.4
SBNO2-209ENST00000590998 PABPN1Q86U42 306 aaKnown RBP eCLIP29.88■■■□□ 2.37
SBNO2-209ENST00000590998 UNC13AQ9UPW8 1703 aa29.88■■■□□ 2.37
SBNO2-209ENST00000590998 MYO15BQ96JP2 1530 aa29.81■■■□□ 2.36
SBNO2-209ENST00000590998 ZCCHC6Q5VYS8 1495 aaKnown RBP29.66■■■□□ 2.34
SBNO2-209ENST00000590998 BICRAQ9NZM4 1560 aa29.64■■■□□ 2.34
SBNO2-209ENST00000590998 DCAF1Q9Y4B6 1507 aa29.47■■■□□ 2.31
SBNO2-209ENST00000590998 SCRIBQ14160 1630 aa29.28■■■□□ 2.28
SBNO2-209ENST00000590998 SHROOM4Q9ULL8 1493 aa29.13■■■□□ 2.25
SBNO2-209ENST00000590998 CC2D2AQ9P2K1 1620 aa28.96■■■□□ 2.23
SBNO2-209ENST00000590998 EIF4G1Q04637 1599 aaKnown RBP28.9■■■□□ 2.22
SBNO2-209ENST00000590998 CECR2Q9BXF3 1484 aa28.85■■■□□ 2.21
SBNO2-209ENST00000590998 NCAPD3P42695 1498 aa27.94■■■□□ 2.06
SBNO2-209ENST00000590998 ATAD2BQ9ULI0 1458 aa27.9■■■□□ 2.06
SBNO2-209ENST00000590998 SMARCA4P51532 1647 aa27.9■■■□□ 2.06
SBNO2-209ENST00000590998 SMARCA2P51531 1590 aa27.79■■■□□ 2.04
SBNO2-209ENST00000590998 HMGXB3Q12766 1538 aa27.75■■■□□ 2.03
SBNO2-209ENST00000590998 BAZ1AQ9NRL2 1556 aaPredicted RBP27.73■■■□□ 2.03
SBNO2-209ENST00000590998 ERCC6Q03468 1493 aa27.65■■■□□ 2.02
SBNO2-209ENST00000590998 BAZ1BQ9UIG0 1483 aaKnown RBP27.63■■■□□ 2.01
SBNO2-209ENST00000590998 MROH2BQ7Z745 1585 aa27.59■■■□□ 2.01
SBNO2-209ENST00000590998 NESP48681 1621 aa27.59■■■□□ 2.01
SBNO2-209ENST00000590998 PEG3Q9GZU2 1588 aa27.58■■■□□ 2.01
SBNO2-209ENST00000590998 CUX2O14529 1486 aa27.55■■■□□ 2
SBNO2-209ENST00000590998 DNAJC5Q9H3Z4 198 aa27.49■■□□□ 1.99
SBNO2-209ENST00000590998 LAMC3Q9Y6N6 1575 aa27.31■■□□□ 1.96
SBNO2-209ENST00000590998 THOC2Q8NI27 1593 aaKnown RBP27.28■■□□□ 1.96
SBNO2-209ENST00000590998 WIZO95785 1651 aa27.27■■□□□ 1.96
SBNO2-209ENST00000590998 KIF21AQ7Z4S6 1674 aa27.23■■□□□ 1.95
SBNO2-209ENST00000590998 PDS5BQ9NTI5 1447 aa27.14■■□□□ 1.93
SBNO2-209ENST00000590998 CADPSQ9ULU8 1353 aa27.1■■□□□ 1.93
SBNO2-209ENST00000590998 RSF1Q96T23 1441 aaPredicted RBP27■■□□□ 1.91
SBNO2-209ENST00000590998 MRC2Q9UBG0 1479 aa26.94■■□□□ 1.9
SBNO2-209ENST00000590998 TOP2AP11388 1531 aaKnown RBP26.89■■□□□ 1.89
SBNO2-209ENST00000590998 WDR62O43379 1518 aa26.88■■□□□ 1.89
SBNO2-209ENST00000590998 CEP164Q9UPV0 1460 aa26.85■■□□□ 1.89
SBNO2-209ENST00000590998 FANCD2Q9BXW9 1451 aa26.83■■□□□ 1.89
SBNO2-209ENST00000590998 CFTRP13569 1480 aa26.81■■□□□ 1.88
SBNO2-209ENST00000590998 URB2Q14146 1524 aaKnown RBP26.63■■□□□ 1.85
SBNO2-209ENST00000590998 CCDC88BA6NC98 1476 aa26.59■■□□□ 1.85
SBNO2-209ENST00000590998 PRDM2Q13029 1718 aa26.58■■□□□ 1.85
SBNO2-209ENST00000590998 TRIM41Q8WV44 630 aa26.38■■□□□ 1.81
SBNO2-209ENST00000590998 TOPBP1Q92547 1522 aa26.34■■□□□ 1.81
SBNO2-209ENST00000590998 ZNF608Q9ULD9 1512 aaPredicted RBP26.31■■□□□ 1.8
SBNO2-209ENST00000590998 IFT140Q96RY7 1462 aa26.29■■□□□ 1.8
SBNO2-209ENST00000590998 OSCARQ8IYS5 282 aa26.28■■□□□ 1.8
SBNO2-209ENST00000590998 DNMBPQ6XZF7 1577 aa26.23■■□□□ 1.79
SBNO2-209ENST00000590998 ABCC8Q09428 1581 aa26.19■■□□□ 1.78
SBNO2-209ENST00000590998 EIF4G3O43432 1585 aaKnown RBP26.16■■□□□ 1.78
SBNO2-209ENST00000590998 TARBP1Q13395 1621 aaKnown RBP26.1■■□□□ 1.77
SBNO2-209ENST00000590998 POLA1P09884 1462 aaPredicted RBP26.08■■□□□ 1.77
SBNO2-209ENST00000590998 AQRO60306 1485 aaKnown RBP eCLIP26.05■■□□□ 1.76
SBNO2-209ENST00000590998 RIMBP3CA6NJZ7 1639 aa26.03■■□□□ 1.76
SBNO2-209ENST00000590998 RIMBP3BA6NNM3 1639 aa26.03■■□□□ 1.76
SBNO2-209ENST00000590998 RIMBP3Q9UFD9 1639 aa26.03■■□□□ 1.76
SBNO2-209ENST00000590998 RAD54L2Q9Y4B4 1467 aa26.01■■□□□ 1.75
SBNO2-209ENST00000590998 CHD1O14646 1710 aa25.97■■□□□ 1.75
SBNO2-209ENST00000590998 ARHGEF11O15085 1522 aa25.93■■□□□ 1.74
SBNO2-209ENST00000590998 FGD5Q6ZNL6 1462 aa25.92■■□□□ 1.74
SBNO2-209ENST00000590998 SOGA1O94964 1423 aa25.92■■□□□ 1.74
SBNO2-209ENST00000590998 CUX1P39880 1505 aa25.91■■□□□ 1.74
SBNO2-209ENST00000590998 TDRD9Q8NDG6 1382 aaKnown RBP25.9■■□□□ 1.74
SBNO2-209ENST00000590998 SUPT5HO00267 1087 aaKnown RBP25.88■■□□□ 1.73
SBNO2-209ENST00000590998 FBLN2P98095 1184 aa25.87■■□□□ 1.73
SBNO2-209ENST00000590998 SNAPC4Q5SXM2 1469 aa25.8■■□□□ 1.72
SBNO2-209ENST00000590998 WDR97A6NE52 1622 aa25.76■■□□□ 1.71
SBNO2-209ENST00000590998 CYB5RLQ6IPT4 315 aa25.72■■□□□ 1.71
SBNO2-209ENST00000590998 ARAP1Q96P48 1450 aa25.7■■□□□ 1.7
SBNO2-209ENST00000590998 GRIN2BQ13224 1484 aa25.69■■□□□ 1.7
SBNO2-209ENST00000590998 MAGI1Q96QZ7 1491 aaPredicted RBP25.67■■□□□ 1.7
SBNO2-209ENST00000590998 CHMP7Q8WUX9 453 aaPredicted RBP25.65■■□□□ 1.7
SBNO2-209ENST00000590998 PBRM1Q86U86 1689 aa25.64■■□□□ 1.7
SBNO2-209ENST00000590998 CLASP1Q7Z460 1538 aa25.64■■□□□ 1.7
SBNO2-209ENST00000590998 GAPVD1Q14C86 1478 aa25.61■■□□□ 1.69
SBNO2-209ENST00000590998 SYNJ1O43426 1573 aa25.61■■□□□ 1.69
SBNO2-209ENST00000590998 SYNJ2O15056 1496 aa25.6■■□□□ 1.69
SBNO2-209ENST00000590998 ABCA10Q8WWZ4 1543 aa25.59■■□□□ 1.69
SBNO2-209ENST00000590998 ABCA5Q8WWZ7 1642 aa25.59■■□□□ 1.69
SBNO2-209ENST00000590998 BIVM-ERCC5R4GMW8 1640 aa25.48■■□□□ 1.67
SBNO2-209ENST00000590998 TOP2BQ02880 1626 aa25.48■■□□□ 1.67
SBNO2-209ENST00000590998 WRNQ14191 1432 aaPredicted RBP eCLIP25.47■■□□□ 1.679e-6■■■■■ 50.1
SBNO2-209ENST00000590998 TRHP20396 242 aaPredicted RBP25.42■■□□□ 1.66
SBNO2-209ENST00000590998 ADAMTS12P58397 1594 aa25.39■■□□□ 1.66
SBNO2-209ENST00000590998 GRIN2AQ12879 1464 aa25.38■■□□□ 1.65
SBNO2-209ENST00000590998 CEP170Q5SW79 1584 aa25.33■■□□□ 1.65
SBNO2-209ENST00000590998 ERCC6L2Q5T890 1561 aa25.31■■□□□ 1.64
SBNO2-209ENST00000590998 NUP160Q12769 1436 aa25.29■■□□□ 1.64
SBNO2-209ENST00000590998 FHAD1B1AJZ9 1412 aa25.28■■□□□ 1.64
SBNO2-209ENST00000590998 ERICH3Q5RHP9 1530 aa25.26■■□□□ 1.63
SBNO2-209ENST00000590998 SHROOM2Q13796 1616 aa25.17■■□□□ 1.62
SBNO2-209ENST00000590998 PRG4Q92954 1404 aaPredicted RBP25.04■■□□□ 1.6
SBNO2-209ENST00000590998 RUSC2Q8N2Y8 1516 aa25.04■■□□□ 1.6
SBNO2-209ENST00000590998 JPH4Q96JJ6 628 aa25.01■■□□□ 1.59
SBNO2-209ENST00000590998 IGF1RP08069 1367 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms