RNA–Protein interactions for RNA: ENST00000590991.1

PLEKHM1-217, Transcript of pleckstrin homology and RUN domain containing M1, humanhuman

TSL 5

Gene PLEKHM1, Length 327 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHM1-217ENST00000590991 NISCHQ9Y2I1 1504 aa22.16■■□□□ 1.14
PLEKHM1-217ENST00000590991 ABCC9O60706 1549 aa20.7■□□□□ 0.9
PLEKHM1-217ENST00000590991 CCDC180Q9P1Z9 1646 aa20.18■□□□□ 0.82
PLEKHM1-217ENST00000590991 DNAJC5BQ9UF47 199 aa19.89■□□□□ 0.77
PLEKHM1-217ENST00000590991 RB1CC1Q8TDY2 1594 aa19.47■□□□□ 0.71
PLEKHM1-217ENST00000590991 NACADO15069 1562 aa19.19■□□□□ 0.66
PLEKHM1-217ENST00000590991 PABPN1Q86U42 306 aaKnown RBP eCLIP19.14■□□□□ 0.65
PLEKHM1-217ENST00000590991 UNC13AQ9UPW8 1703 aa19.08■□□□□ 0.64
PLEKHM1-217ENST00000590991 BICRAQ9NZM4 1560 aa18.93■□□□□ 0.62
PLEKHM1-217ENST00000590991 DCAF8L2P0C7V8 631 aa18.88■□□□□ 0.61
PLEKHM1-217ENST00000590991 MYO15BQ96JP2 1530 aa18.73■□□□□ 0.59
PLEKHM1-217ENST00000590991 CECR2Q9BXF3 1484 aa18.71■□□□□ 0.59
PLEKHM1-217ENST00000590991 CC2D2AQ9P2K1 1620 aa18.7■□□□□ 0.58
PLEKHM1-217ENST00000590991 DNAJC5Q9H3Z4 198 aa18.69■□□□□ 0.58
PLEKHM1-217ENST00000590991 SHROOM4Q9ULL8 1493 aa18.62■□□□□ 0.57
PLEKHM1-217ENST00000590991 EIF4G1Q04637 1599 aaKnown RBP18.51■□□□□ 0.55
PLEKHM1-217ENST00000590991 SCRIBQ14160 1630 aa18.34■□□□□ 0.53
PLEKHM1-217ENST00000590991 DCAF1Q9Y4B6 1507 aa18.28■□□□□ 0.52
PLEKHM1-217ENST00000590991 ZCCHC6Q5VYS8 1495 aaKnown RBP18.26■□□□□ 0.51
PLEKHM1-217ENST00000590991 CUX2O14529 1486 aa18.1■□□□□ 0.49
PLEKHM1-217ENST00000590991 ERCC6Q03468 1493 aa17.93■□□□□ 0.46
PLEKHM1-217ENST00000590991 NCAPD3P42695 1498 aa17.69■□□□□ 0.42
PLEKHM1-217ENST00000590991 TRIM41Q8WV44 630 aa17.64■□□□□ 0.41
PLEKHM1-217ENST00000590991 NESP48681 1621 aa17.62■□□□□ 0.41
PLEKHM1-217ENST00000590991 THOC2Q8NI27 1593 aaKnown RBP17.61■□□□□ 0.41
PLEKHM1-217ENST00000590991 ATAD2BQ9ULI0 1458 aa17.57■□□□□ 0.4
PLEKHM1-217ENST00000590991 HMGXB3Q12766 1538 aa17.55■□□□□ 0.4
PLEKHM1-217ENST00000590991 SMARCA2P51531 1590 aa17.5■□□□□ 0.39
PLEKHM1-217ENST00000590991 SMARCA4P51532 1647 aa17.43■□□□□ 0.38
PLEKHM1-217ENST00000590991 LAMC3Q9Y6N6 1575 aa17.42■□□□□ 0.38
PLEKHM1-217ENST00000590991 KIF21AQ7Z4S6 1674 aa17.42■□□□□ 0.38
PLEKHM1-217ENST00000590991 BAZ1BQ9UIG0 1483 aaKnown RBP17.38■□□□□ 0.37
PLEKHM1-217ENST00000590991 PDS5BQ9NTI5 1447 aa17.31■□□□□ 0.36
PLEKHM1-217ENST00000590991 PEG3Q9GZU2 1588 aa17.27■□□□□ 0.35
PLEKHM1-217ENST00000590991 BAZ1AQ9NRL2 1556 aaPredicted RBP17.26■□□□□ 0.35
PLEKHM1-217ENST00000590991 MRC2Q9UBG0 1479 aa17.22■□□□□ 0.35
PLEKHM1-217ENST00000590991 WDR62O43379 1518 aa17.21■□□□□ 0.35
PLEKHM1-217ENST00000590991 CADPSQ9ULU8 1353 aa17.12■□□□□ 0.33
PLEKHM1-217ENST00000590991 OSCARQ8IYS5 282 aa17.11■□□□□ 0.33
PLEKHM1-217ENST00000590991 MROH2BQ7Z745 1585 aa17.07■□□□□ 0.32
PLEKHM1-217ENST00000590991 CEP164Q9UPV0 1460 aa17.04■□□□□ 0.32
PLEKHM1-217ENST00000590991 RIMBP3CA6NJZ7 1639 aa17.03■□□□□ 0.32
PLEKHM1-217ENST00000590991 RIMBP3BA6NNM3 1639 aa17.03■□□□□ 0.32
PLEKHM1-217ENST00000590991 RIMBP3Q9UFD9 1639 aa17.03■□□□□ 0.32
PLEKHM1-217ENST00000590991 FANCD2Q9BXW9 1451 aa16.96■□□□□ 0.31
PLEKHM1-217ENST00000590991 ARHGEF11O15085 1522 aa16.91■□□□□ 0.3
PLEKHM1-217ENST00000590991 URB2Q14146 1524 aaKnown RBP16.86■□□□□ 0.29
PLEKHM1-217ENST00000590991 WIZO95785 1651 aa16.85■□□□□ 0.29
PLEKHM1-217ENST00000590991 CFTRP13569 1480 aa16.83■□□□□ 0.28
PLEKHM1-217ENST00000590991 TRHP20396 242 aaPredicted RBP16.76■□□□□ 0.27
PLEKHM1-217ENST00000590991 CYB5RLQ6IPT4 315 aa16.76■□□□□ 0.27
PLEKHM1-217ENST00000590991 ZNF608Q9ULD9 1512 aaPredicted RBP16.74■□□□□ 0.27
PLEKHM1-217ENST00000590991 IFT140Q96RY7 1462 aa16.71■□□□□ 0.27
PLEKHM1-217ENST00000590991 ARAP1Q96P48 1450 aa16.7■□□□□ 0.26
PLEKHM1-217ENST00000590991 AEBP2Q6ZN18 517 aaPredicted RBP16.7■□□□□ 0.26
PLEKHM1-217ENST00000590991 PRDM2Q13029 1718 aa16.67■□□□□ 0.26
PLEKHM1-217ENST00000590991 EIF4G3O43432 1585 aaKnown RBP16.65■□□□□ 0.26
PLEKHM1-217ENST00000590991 CHD1O14646 1710 aa16.65■□□□□ 0.26
PLEKHM1-217ENST00000590991 RSF1Q96T23 1441 aaPredicted RBP16.6■□□□□ 0.25
PLEKHM1-217ENST00000590991 TOP2AP11388 1531 aaKnown RBP16.6■□□□□ 0.25
PLEKHM1-217ENST00000590991 TOPBP1Q92547 1522 aa16.58■□□□□ 0.24
PLEKHM1-217ENST00000590991 AQRO60306 1485 aaKnown RBP eCLIP16.49■□□□□ 0.23
PLEKHM1-217ENST00000590991 TARBP1Q13395 1621 aaKnown RBP16.48■□□□□ 0.23
PLEKHM1-217ENST00000590991 ABCC8Q09428 1581 aa16.47■□□□□ 0.23
PLEKHM1-217ENST00000590991 DNMBPQ6XZF7 1577 aa16.47■□□□□ 0.23
PLEKHM1-217ENST00000590991 FBLN2P98095 1184 aa16.47■□□□□ 0.23
PLEKHM1-217ENST00000590991 CLASP1Q7Z460 1538 aa16.42■□□□□ 0.22
PLEKHM1-217ENST00000590991 CCDC88BA6NC98 1476 aa16.38■□□□□ 0.21
PLEKHM1-217ENST00000590991 POLA1P09884 1462 aaPredicted RBP16.37■□□□□ 0.21
PLEKHM1-217ENST00000590991 SYNJ1O43426 1573 aa16.35■□□□□ 0.21
PLEKHM1-217ENST00000590991 SNAPC4Q5SXM2 1469 aa16.34■□□□□ 0.21
PLEKHM1-217ENST00000590991 RAD54L2Q9Y4B4 1467 aa16.3■□□□□ 0.2
PLEKHM1-217ENST00000590991 TDRD9Q8NDG6 1382 aaKnown RBP16.29■□□□□ 0.2
PLEKHM1-217ENST00000590991 WDR97A6NE52 1622 aa16.29■□□□□ 0.2
PLEKHM1-217ENST00000590991 GAPVD1Q14C86 1478 aa16.27■□□□□ 0.19
PLEKHM1-217ENST00000590991 MAGI1Q96QZ7 1491 aaPredicted RBP16.27■□□□□ 0.19
PLEKHM1-217ENST00000590991 CHMP7Q8WUX9 453 aaPredicted RBP16.26■□□□□ 0.19
PLEKHM1-217ENST00000590991 SOGA1O94964 1423 aa16.25■□□□□ 0.19
PLEKHM1-217ENST00000590991 SYNJ2O15056 1496 aa16.22■□□□□ 0.19
PLEKHM1-217ENST00000590991 GRIN2BQ13224 1484 aa16.2■□□□□ 0.18
PLEKHM1-217ENST00000590991 FGD5Q6ZNL6 1462 aa16.18■□□□□ 0.18
PLEKHM1-217ENST00000590991 PBRM1Q86U86 1689 aa16.14■□□□□ 0.18
PLEKHM1-217ENST00000590991 ERCC6L2Q5T890 1561 aa16.12■□□□□ 0.17
PLEKHM1-217ENST00000590991 KIF13AQ9H1H9 1805 aa16.12■□□□□ 0.17
PLEKHM1-217ENST00000590991 CUX1P39880 1505 aa16.08■□□□□ 0.16
PLEKHM1-217ENST00000590991 ILDR1Q86SU0 546 aaPredicted RBP16.06■□□□□ 0.16
PLEKHM1-217ENST00000590991 CEP170Q5SW79 1584 aa16.04■□□□□ 0.16
PLEKHM1-217ENST00000590991 ABCA5Q8WWZ7 1642 aa16.02■□□□□ 0.16
PLEKHM1-217ENST00000590991 GRIN2AQ12879 1464 aa16■□□□□ 0.15
PLEKHM1-217ENST00000590991 SHROOM2Q13796 1616 aa15.98■□□□□ 0.15
PLEKHM1-217ENST00000590991 NUP160Q12769 1436 aa15.97■□□□□ 0.15
PLEKHM1-217ENST00000590991 ABCA10Q8WWZ4 1543 aa15.96■□□□□ 0.15
PLEKHM1-217ENST00000590991 KDM4FA0A1W2PPD8 638 aa15.95■□□□□ 0.14
PLEKHM1-217ENST00000590991 ADAMTS12P58397 1594 aa15.95■□□□□ 0.14
PLEKHM1-217ENST00000590991 ABCC10Q5T3U5 1492 aa15.91■□□□□ 0.14
PLEKHM1-217ENST00000590991 KDM6BO15054 1643 aa15.9■□□□□ 0.14
PLEKHM1-217ENST00000590991 DIP2BQ9P265 1576 aa15.89■□□□□ 0.13
PLEKHM1-217ENST00000590991 FAM69CQ0P6D2 419 aa15.89■□□□□ 0.13
PLEKHM1-217ENST00000590991 MAPKBP1O60336 1514 aa15.87■□□□□ 0.13
PLEKHM1-217ENST00000590991 PRG4Q92954 1404 aaPredicted RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms