RNA–Protein interactions for RNA: ENST00000590952.1

LINC01534-203, Transcript of long intergenic non-protein coding RNA 1534, humanhuman

TSL 4

Gene LINC01534, Length 550 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01534-203ENST00000590952 NISCHQ9Y2I1 1504 aa40.21■■■■■ 4.03
LINC01534-203ENST00000590952 ABCC9O60706 1549 aa36.29■■■■□ 3.4
LINC01534-203ENST00000590952 CCDC180Q9P1Z9 1646 aa36.13■■■■□ 3.37
LINC01534-203ENST00000590952 RB1CC1Q8TDY2 1594 aa34.51■■■■□ 3.12
LINC01534-203ENST00000590952 NACADO15069 1562 aa34.24■■■■□ 3.07
LINC01534-203ENST00000590952 DNAJC5BQ9UF47 199 aa34.23■■■■□ 3.07
LINC01534-203ENST00000590952 DCAF8L2P0C7V8 631 aa34.03■■■■□ 3.04
LINC01534-203ENST00000590952 PABPN1Q86U42 306 aaKnown RBP eCLIP33.78■■■■□ 3
LINC01534-203ENST00000590952 MYO15BQ96JP2 1530 aa33.76■■■■□ 3
LINC01534-203ENST00000590952 UNC13AQ9UPW8 1703 aa33.63■■■□□ 2.97
LINC01534-203ENST00000590952 BICRAQ9NZM4 1560 aa33.47■■■□□ 2.95
LINC01534-203ENST00000590952 ZCCHC6Q5VYS8 1495 aaKnown RBP33.26■■■□□ 2.92
LINC01534-203ENST00000590952 DCAF1Q9Y4B6 1507 aa33.24■■■□□ 2.91
LINC01534-203ENST00000590952 SHROOM4Q9ULL8 1493 aa33.09■■■□□ 2.89
LINC01534-203ENST00000590952 SCRIBQ14160 1630 aa32.86■■■□□ 2.85
LINC01534-203ENST00000590952 CC2D2AQ9P2K1 1620 aa32.77■■■□□ 2.84
LINC01534-203ENST00000590952 CECR2Q9BXF3 1484 aa32.74■■■□□ 2.83
LINC01534-203ENST00000590952 EIF4G1Q04637 1599 aaKnown RBP32.67■■■□□ 2.82
LINC01534-203ENST00000590952 NCAPD3P42695 1498 aa31.64■■■□□ 2.66
LINC01534-203ENST00000590952 DNAJC5Q9H3Z4 198 aa31.62■■■□□ 2.65
LINC01534-203ENST00000590952 ATAD2BQ9ULI0 1458 aa31.48■■■□□ 2.63
LINC01534-203ENST00000590952 CUX2O14529 1486 aa31.4■■■□□ 2.62
LINC01534-203ENST00000590952 SMARCA2P51531 1590 aa31.39■■■□□ 2.62
LINC01534-203ENST00000590952 ERCC6Q03468 1493 aa31.37■■■□□ 2.61
LINC01534-203ENST00000590952 SMARCA4P51532 1647 aa31.37■■■□□ 2.61
LINC01534-203ENST00000590952 HMGXB3Q12766 1538 aa31.34■■■□□ 2.61
LINC01534-203ENST00000590952 BAZ1AQ9NRL2 1556 aaPredicted RBP31.22■■■□□ 2.59
LINC01534-203ENST00000590952 BAZ1BQ9UIG0 1483 aaKnown RBP31.15■■■□□ 2.58
LINC01534-203ENST00000590952 NESP48681 1621 aa31.11■■■□□ 2.57
LINC01534-203ENST00000590952 PEG3Q9GZU2 1588 aa31.11■■■□□ 2.57
LINC01534-203ENST00000590952 MROH2BQ7Z745 1585 aa30.95■■■□□ 2.54
LINC01534-203ENST00000590952 LAMC3Q9Y6N6 1575 aa30.92■■■□□ 2.54
LINC01534-203ENST00000590952 THOC2Q8NI27 1593 aaKnown RBP30.82■■■□□ 2.52
LINC01534-203ENST00000590952 PDS5BQ9NTI5 1447 aa30.79■■■□□ 2.52
LINC01534-203ENST00000590952 CADPSQ9ULU8 1353 aa30.67■■■□□ 2.5
LINC01534-203ENST00000590952 KIF21AQ7Z4S6 1674 aa30.67■■■□□ 2.5
LINC01534-203ENST00000590952 WIZO95785 1651 aa30.55■■■□□ 2.48
LINC01534-203ENST00000590952 MRC2Q9UBG0 1479 aa30.48■■■□□ 2.47
LINC01534-203ENST00000590952 WDR62O43379 1518 aa30.4■■■□□ 2.46
LINC01534-203ENST00000590952 CEP164Q9UPV0 1460 aa30.32■■■□□ 2.44
LINC01534-203ENST00000590952 FANCD2Q9BXW9 1451 aa30.28■■■□□ 2.44
LINC01534-203ENST00000590952 RSF1Q96T23 1441 aaPredicted RBP30.28■■■□□ 2.44
LINC01534-203ENST00000590952 CFTRP13569 1480 aa30.27■■■□□ 2.44
LINC01534-203ENST00000590952 TOP2AP11388 1531 aaKnown RBP30.17■■■□□ 2.42
LINC01534-203ENST00000590952 TRIM41Q8WV44 630 aa30.09■■■□□ 2.41
LINC01534-203ENST00000590952 URB2Q14146 1524 aaKnown RBP30.01■■■□□ 2.4
LINC01534-203ENST00000590952 OSCARQ8IYS5 282 aa29.99■■■□□ 2.39
LINC01534-203ENST00000590952 CCDC88BA6NC98 1476 aa29.87■■■□□ 2.37
LINC01534-203ENST00000590952 PRDM2Q13029 1718 aa29.86■■■□□ 2.37
LINC01534-203ENST00000590952 IFT140Q96RY7 1462 aa29.74■■■□□ 2.35
LINC01534-203ENST00000590952 TOPBP1Q92547 1522 aa29.67■■■□□ 2.34
LINC01534-203ENST00000590952 ZNF608Q9ULD9 1512 aaPredicted RBP29.67■■■□□ 2.34
LINC01534-203ENST00000590952 ABCC8Q09428 1581 aa29.67■■■□□ 2.34
LINC01534-203ENST00000590952 DNMBPQ6XZF7 1577 aa29.55■■■□□ 2.32
LINC01534-203ENST00000590952 RIMBP3CA6NJZ7 1639 aa29.51■■■□□ 2.31
LINC01534-203ENST00000590952 RIMBP3BA6NNM3 1639 aa29.51■■■□□ 2.31
LINC01534-203ENST00000590952 RIMBP3Q9UFD9 1639 aa29.51■■■□□ 2.31
LINC01534-203ENST00000590952 EIF4G3O43432 1585 aaKnown RBP29.47■■■□□ 2.31
LINC01534-203ENST00000590952 TARBP1Q13395 1621 aaKnown RBP29.42■■■□□ 2.3
LINC01534-203ENST00000590952 ARHGEF11O15085 1522 aa29.42■■■□□ 2.3
LINC01534-203ENST00000590952 AQRO60306 1485 aaKnown RBP eCLIP29.41■■■□□ 2.33e-7■■■□□ 16.7
LINC01534-203ENST00000590952 POLA1P09884 1462 aaPredicted RBP29.36■■■□□ 2.29
LINC01534-203ENST00000590952 FBLN2P98095 1184 aa29.27■■■□□ 2.28
LINC01534-203ENST00000590952 SOGA1O94964 1423 aa29.27■■■□□ 2.28
LINC01534-203ENST00000590952 CHD1O14646 1710 aa29.26■■■□□ 2.27
LINC01534-203ENST00000590952 CYB5RLQ6IPT4 315 aa29.26■■■□□ 2.27
LINC01534-203ENST00000590952 RAD54L2Q9Y4B4 1467 aa29.24■■■□□ 2.27
LINC01534-203ENST00000590952 TDRD9Q8NDG6 1382 aaKnown RBP29.21■■■□□ 2.27
LINC01534-203ENST00000590952 WDR97A6NE52 1622 aa29.16■■■□□ 2.26
LINC01534-203ENST00000590952 FGD5Q6ZNL6 1462 aa29.14■■■□□ 2.26
LINC01534-203ENST00000590952 ARAP1Q96P48 1450 aa29.1■■■□□ 2.25
LINC01534-203ENST00000590952 CUX1P39880 1505 aa29.09■■■□□ 2.25
LINC01534-203ENST00000590952 SNAPC4Q5SXM2 1469 aa29.08■■■□□ 2.25
LINC01534-203ENST00000590952 CHMP7Q8WUX9 453 aaPredicted RBP29.06■■■□□ 2.24
LINC01534-203ENST00000590952 MAGI1Q96QZ7 1491 aaPredicted RBP29.04■■■□□ 2.24
LINC01534-203ENST00000590952 GRIN2BQ13224 1484 aa29.02■■■□□ 2.24
LINC01534-203ENST00000590952 TRHP20396 242 aaPredicted RBP28.98■■■□□ 2.23
LINC01534-203ENST00000590952 CLASP1Q7Z460 1538 aa28.98■■■□□ 2.23
LINC01534-203ENST00000590952 SYNJ1O43426 1573 aa28.96■■■□□ 2.23
LINC01534-203ENST00000590952 SYNJ2O15056 1496 aa28.94■■■□□ 2.22
LINC01534-203ENST00000590952 GAPVD1Q14C86 1478 aa28.89■■■□□ 2.22
LINC01534-203ENST00000590952 ABCA10Q8WWZ4 1543 aa28.84■■■□□ 2.21
LINC01534-203ENST00000590952 PBRM1Q86U86 1689 aa28.81■■■□□ 2.2
LINC01534-203ENST00000590952 SUPT5HO00267 1087 aaKnown RBP28.8■■■□□ 2.2
LINC01534-203ENST00000590952 ABCA5Q8WWZ7 1642 aa28.76■■■□□ 2.2
LINC01534-203ENST00000590952 WRNQ14191 1432 aaPredicted RBP eCLIP28.71■■■□□ 2.19
LINC01534-203ENST00000590952 GRIN2AQ12879 1464 aa28.62■■■□□ 2.17
LINC01534-203ENST00000590952 TOP2BQ02880 1626 aa28.59■■■□□ 2.17
LINC01534-203ENST00000590952 BIVM-ERCC5R4GMW8 1640 aa28.58■■■□□ 2.17
LINC01534-203ENST00000590952 ADAMTS12P58397 1594 aa28.55■■■□□ 2.16
LINC01534-203ENST00000590952 NUP160Q12769 1436 aa28.55■■■□□ 2.16
LINC01534-203ENST00000590952 FHAD1B1AJZ9 1412 aa28.53■■■□□ 2.16
LINC01534-203ENST00000590952 CEP170Q5SW79 1584 aa28.5■■■□□ 2.15
LINC01534-203ENST00000590952 ERCC6L2Q5T890 1561 aa28.48■■■□□ 2.15
LINC01534-203ENST00000590952 ERICH3Q5RHP9 1530 aa28.48■■■□□ 2.15
LINC01534-203ENST00000590952 SHROOM2Q13796 1616 aa28.42■■■□□ 2.14
LINC01534-203ENST00000590952 JPH4Q96JJ6 628 aa28.31■■■□□ 2.12
LINC01534-203ENST00000590952 PRG4Q92954 1404 aaPredicted RBP28.29■■■□□ 2.12
LINC01534-203ENST00000590952 AEBP2Q6ZN18 517 aaPredicted RBP28.29■■■□□ 2.12
LINC01534-203ENST00000590952 RUSC2Q8N2Y8 1516 aa28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms