RNA–Protein interactions for RNA: ENST00000590922.1

GFAP-217, Transcript of glial fibrillary acidic protein, humanhuman

TSL 2

Gene GFAP, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-217ENST00000590922 NISCHQ9Y2I1 1504 aa27.41■■□□□ 1.98
GFAP-217ENST00000590922 ABCC9O60706 1549 aa25.03■■□□□ 1.6
GFAP-217ENST00000590922 CCDC180Q9P1Z9 1646 aa24.75■■□□□ 1.55
GFAP-217ENST00000590922 DNAJC5BQ9UF47 199 aa23.74■■□□□ 1.39
GFAP-217ENST00000590922 RB1CC1Q8TDY2 1594 aa23.71■■□□□ 1.39
GFAP-217ENST00000590922 NACADO15069 1562 aa23.47■■□□□ 1.35
GFAP-217ENST00000590922 DCAF8L2P0C7V8 631 aa23.27■■□□□ 1.32
GFAP-217ENST00000590922 PABPN1Q86U42 306 aaKnown RBP eCLIP23.24■■□□□ 1.31
GFAP-217ENST00000590922 UNC13AQ9UPW8 1703 aa23.18■■□□□ 1.3
GFAP-217ENST00000590922 MYO15BQ96JP2 1530 aa23.05■■□□□ 1.28
GFAP-217ENST00000590922 BICRAQ9NZM4 1560 aa23.01■■□□□ 1.27
GFAP-217ENST00000590922 SHROOM4Q9ULL8 1493 aa22.7■■□□□ 1.22
GFAP-217ENST00000590922 ZCCHC6Q5VYS8 1495 aaKnown RBP22.65■■□□□ 1.22
GFAP-217ENST00000590922 DCAF1Q9Y4B6 1507 aa22.63■■□□□ 1.21
GFAP-217ENST00000590922 CC2D2AQ9P2K1 1620 aa22.6■■□□□ 1.21
GFAP-217ENST00000590922 CECR2Q9BXF3 1484 aa22.59■■□□□ 1.21
GFAP-217ENST00000590922 SCRIBQ14160 1630 aa22.52■■□□□ 1.2
GFAP-217ENST00000590922 EIF4G1Q04637 1599 aaKnown RBP22.48■■□□□ 1.19
GFAP-217ENST00000590922 DNAJC5Q9H3Z4 198 aa22.06■■□□□ 1.12
GFAP-217ENST00000590922 CUX2O14529 1486 aa21.72■■□□□ 1.07
GFAP-217ENST00000590922 NCAPD3P42695 1498 aa21.66■■□□□ 1.06
GFAP-217ENST00000590922 ERCC6Q03468 1493 aa21.65■■□□□ 1.06
GFAP-217ENST00000590922 ATAD2BQ9ULI0 1458 aa21.55■■□□□ 1.04
GFAP-217ENST00000590922 SMARCA2P51531 1590 aa21.49■■□□□ 1.03
GFAP-217ENST00000590922 HMGXB3Q12766 1538 aa21.48■■□□□ 1.03
GFAP-217ENST00000590922 SMARCA4P51532 1647 aa21.45■■□□□ 1.02
GFAP-217ENST00000590922 NESP48681 1621 aa21.41■■□□□ 1.02
GFAP-217ENST00000590922 BAZ1BQ9UIG0 1483 aaKnown RBP21.33■■□□□ 1.01
GFAP-217ENST00000590922 BAZ1AQ9NRL2 1556 aaPredicted RBP21.31■■□□□ 1
GFAP-217ENST00000590922 THOC2Q8NI27 1593 aaKnown RBP21.27■□□□□ 0.99
GFAP-217ENST00000590922 PEG3Q9GZU2 1588 aa21.25■□□□□ 0.99
GFAP-217ENST00000590922 LAMC3Q9Y6N6 1575 aa21.23■□□□□ 0.99
GFAP-217ENST00000590922 KIF21AQ7Z4S6 1674 aa21.15■□□□□ 0.98
GFAP-217ENST00000590922 PDS5BQ9NTI5 1447 aa21.12■□□□□ 0.97
GFAP-217ENST00000590922 MROH2BQ7Z745 1585 aa21.11■□□□□ 0.97
GFAP-217ENST00000590922 CADPSQ9ULU8 1353 aa20.98■□□□□ 0.95
GFAP-217ENST00000590922 MRC2Q9UBG0 1479 aa20.95■□□□□ 0.94
GFAP-217ENST00000590922 TRIM41Q8WV44 630 aa20.95■□□□□ 0.94
GFAP-217ENST00000590922 WDR62O43379 1518 aa20.91■□□□□ 0.94
GFAP-217ENST00000590922 WIZO95785 1651 aa20.85■□□□□ 0.93
GFAP-217ENST00000590922 CEP164Q9UPV0 1460 aa20.81■□□□□ 0.92
GFAP-217ENST00000590922 FANCD2Q9BXW9 1451 aa20.75■□□□□ 0.91
GFAP-217ENST00000590922 CFTRP13569 1480 aa20.69■□□□□ 0.9
GFAP-217ENST00000590922 OSCARQ8IYS5 282 aa20.68■□□□□ 0.9
GFAP-217ENST00000590922 URB2Q14146 1524 aaKnown RBP20.59■□□□□ 0.89
GFAP-217ENST00000590922 TOP2AP11388 1531 aaKnown RBP20.57■□□□□ 0.88
GFAP-217ENST00000590922 RSF1Q96T23 1441 aaPredicted RBP20.56■□□□□ 0.88
GFAP-217ENST00000590922 PRDM2Q13029 1718 aa20.48■□□□□ 0.87
GFAP-217ENST00000590922 RIMBP3CA6NJZ7 1639 aa20.44■□□□□ 0.86
GFAP-217ENST00000590922 RIMBP3BA6NNM3 1639 aa20.44■□□□□ 0.86
GFAP-217ENST00000590922 RIMBP3Q9UFD9 1639 aa20.44■□□□□ 0.86
GFAP-217ENST00000590922 IFT140Q96RY7 1462 aa20.4■□□□□ 0.86
GFAP-217ENST00000590922 ZNF608Q9ULD9 1512 aaPredicted RBP20.39■□□□□ 0.85
GFAP-217ENST00000590922 ARHGEF11O15085 1522 aa20.34■□□□□ 0.85
GFAP-217ENST00000590922 CCDC88BA6NC98 1476 aa20.33■□□□□ 0.85
GFAP-217ENST00000590922 TOPBP1Q92547 1522 aa20.32■□□□□ 0.84
GFAP-217ENST00000590922 ABCC8Q09428 1581 aa20.28■□□□□ 0.84
GFAP-217ENST00000590922 EIF4G3O43432 1585 aaKnown RBP20.27■□□□□ 0.84
GFAP-217ENST00000590922 DNMBPQ6XZF7 1577 aa20.23■□□□□ 0.83
GFAP-217ENST00000590922 CYB5RLQ6IPT4 315 aa20.21■□□□□ 0.83
GFAP-217ENST00000590922 CHD1O14646 1710 aa20.19■□□□□ 0.82
GFAP-217ENST00000590922 AQRO60306 1485 aaKnown RBP eCLIP20.17■□□□□ 0.82
GFAP-217ENST00000590922 TARBP1Q13395 1621 aaKnown RBP20.16■□□□□ 0.82
GFAP-217ENST00000590922 ARAP1Q96P48 1450 aa20.11■□□□□ 0.81
GFAP-217ENST00000590922 FBLN2P98095 1184 aa20.11■□□□□ 0.81
GFAP-217ENST00000590922 TRHP20396 242 aaPredicted RBP20.09■□□□□ 0.81
GFAP-217ENST00000590922 POLA1P09884 1462 aaPredicted RBP20.09■□□□□ 0.81
GFAP-217ENST00000590922 RAD54L2Q9Y4B4 1467 aa20.01■□□□□ 0.79
GFAP-217ENST00000590922 TDRD9Q8NDG6 1382 aaKnown RBP20■□□□□ 0.79
GFAP-217ENST00000590922 SOGA1O94964 1423 aa20■□□□□ 0.79
GFAP-217ENST00000590922 WDR97A6NE52 1622 aa19.96■□□□□ 0.79
GFAP-217ENST00000590922 SNAPC4Q5SXM2 1469 aa19.95■□□□□ 0.78
GFAP-217ENST00000590922 CLASP1Q7Z460 1538 aa19.94■□□□□ 0.78
GFAP-217ENST00000590922 FGD5Q6ZNL6 1462 aa19.92■□□□□ 0.78
GFAP-217ENST00000590922 SYNJ1O43426 1573 aa19.91■□□□□ 0.78
GFAP-217ENST00000590922 CHMP7Q8WUX9 453 aaPredicted RBP19.91■□□□□ 0.78
GFAP-217ENST00000590922 MAGI1Q96QZ7 1491 aaPredicted RBP19.91■□□□□ 0.78
GFAP-217ENST00000590922 GRIN2BQ13224 1484 aa19.86■□□□□ 0.77
GFAP-217ENST00000590922 CUX1P39880 1505 aa19.86■□□□□ 0.77
GFAP-217ENST00000590922 SYNJ2O15056 1496 aa19.84■□□□□ 0.77
GFAP-217ENST00000590922 PBRM1Q86U86 1689 aa19.78■□□□□ 0.76
GFAP-217ENST00000590922 SUPT5HO00267 1087 aaKnown RBP19.77■□□□□ 0.76
GFAP-217ENST00000590922 GAPVD1Q14C86 1478 aa19.75■□□□□ 0.75
GFAP-217ENST00000590922 AEBP2Q6ZN18 517 aaPredicted RBP19.74■□□□□ 0.75
GFAP-217ENST00000590922 ABCA10Q8WWZ4 1543 aa19.69■□□□□ 0.74
GFAP-217ENST00000590922 ABCA5Q8WWZ7 1642 aa19.69■□□□□ 0.74
GFAP-217ENST00000590922 GRIN2AQ12879 1464 aa19.6■□□□□ 0.73
GFAP-217ENST00000590922 ERCC6L2Q5T890 1561 aa19.59■□□□□ 0.73
GFAP-217ENST00000590922 ADAMTS12P58397 1594 aa19.56■□□□□ 0.72
GFAP-217ENST00000590922 CEP170Q5SW79 1584 aa19.56■□□□□ 0.72
GFAP-217ENST00000590922 NUP160Q12769 1436 aa19.55■□□□□ 0.72
GFAP-217ENST00000590922 WRNQ14191 1432 aaPredicted RBP eCLIP19.55■□□□□ 0.72
GFAP-217ENST00000590922 SHROOM2Q13796 1616 aa19.51■□□□□ 0.71
GFAP-217ENST00000590922 FHAD1B1AJZ9 1412 aa19.5■□□□□ 0.71
GFAP-217ENST00000590922 BIVM-ERCC5R4GMW8 1640 aa19.47■□□□□ 0.71
GFAP-217ENST00000590922 TOP2BQ02880 1626 aa19.46■□□□□ 0.71
GFAP-217ENST00000590922 ERICH3Q5RHP9 1530 aa19.44■□□□□ 0.7
GFAP-217ENST00000590922 KIF13AQ9H1H9 1805 aa19.43■□□□□ 0.7
GFAP-217ENST00000590922 PRG4Q92954 1404 aaPredicted RBP19.39■□□□□ 0.69
GFAP-217ENST00000590922 JPH4Q96JJ6 628 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms