RNA–Protein interactions for RNA: ENST00000590897.1

MARK4-206, Transcript of microtubule affinity regulating kinase 4, humanhuman

TSL 2

Gene MARK4, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK4-206ENST00000590897 NISCHQ9Y2I1 1504 aa52.24■■■■■ 5.95
MARK4-206ENST00000590897 ABCC9O60706 1549 aa47.4■■■■■ 5.18
MARK4-206ENST00000590897 CCDC180Q9P1Z9 1646 aa47.1■■■■■ 5.13
MARK4-206ENST00000590897 RB1CC1Q8TDY2 1594 aa44.99■■■■■ 4.79
MARK4-206ENST00000590897 DNAJC5BQ9UF47 199 aa44.72■■■■■ 4.75
MARK4-206ENST00000590897 NACADO15069 1562 aa44.59■■■■■ 4.73
MARK4-206ENST00000590897 DCAF8L2P0C7V8 631 aa44.19■■■■■ 4.66
MARK4-206ENST00000590897 PABPN1Q86U42 306 aaKnown RBP eCLIP44.02■■■■■ 4.64
MARK4-206ENST00000590897 UNC13AQ9UPW8 1703 aa43.98■■■■■ 4.63
MARK4-206ENST00000590897 MYO15BQ96JP2 1530 aa43.86■■■■■ 4.61
MARK4-206ENST00000590897 BICRAQ9NZM4 1560 aa43.67■■■■■ 4.58
MARK4-206ENST00000590897 ZCCHC6Q5VYS8 1495 aaKnown RBP43.23■■■■■ 4.51
MARK4-206ENST00000590897 DCAF1Q9Y4B6 1507 aa43.16■■■■■ 4.5
MARK4-206ENST00000590897 SHROOM4Q9ULL8 1493 aa43.11■■■■■ 4.49
MARK4-206ENST00000590897 SCRIBQ14160 1630 aa42.85■■■■■ 4.45
MARK4-206ENST00000590897 CC2D2AQ9P2K1 1620 aa42.82■■■■■ 4.44
MARK4-206ENST00000590897 CECR2Q9BXF3 1484 aa42.74■■■■■ 4.43
MARK4-206ENST00000590897 EIF4G1Q04637 1599 aaKnown RBP42.64■■■■■ 4.42
MARK4-206ENST00000590897 DNAJC5Q9H3Z4 198 aa41.39■■■■■ 4.22
MARK4-206ENST00000590897 NCAPD3P42695 1498 aa41.15■■■■■ 4.18
MARK4-206ENST00000590897 CUX2O14529 1486 aa41.05■■■■■ 4.16
MARK4-206ENST00000590897 ERCC6Q03468 1493 aa40.98■■■■■ 4.15
MARK4-206ENST00000590897 ATAD2BQ9ULI0 1458 aa40.96■■■■■ 4.15
MARK4-206ENST00000590897 SMARCA2P51531 1590 aa40.86■■■■■ 4.13
MARK4-206ENST00000590897 SMARCA4P51532 1647 aa40.85■■■■■ 4.13
MARK4-206ENST00000590897 HMGXB3Q12766 1538 aa40.84■■■■■ 4.13
MARK4-206ENST00000590897 BAZ1AQ9NRL2 1556 aaPredicted RBP40.6■■■■■ 4.09
MARK4-206ENST00000590897 NESP48681 1621 aa40.6■■■■■ 4.09
MARK4-206ENST00000590897 BAZ1BQ9UIG0 1483 aaKnown RBP40.57■■■■■ 4.08
MARK4-206ENST00000590897 PEG3Q9GZU2 1588 aa40.47■■■■■ 4.07
MARK4-206ENST00000590897 THOC2Q8NI27 1593 aaKnown RBP40.31■■■■■ 4.04
MARK4-206ENST00000590897 LAMC3Q9Y6N6 1575 aa40.31■■■■■ 4.04
MARK4-206ENST00000590897 MROH2BQ7Z745 1585 aa40.23■■■■■ 4.03
MARK4-206ENST00000590897 KIF21AQ7Z4S6 1674 aa40.11■■■■■ 4.01
MARK4-206ENST00000590897 PDS5BQ9NTI5 1447 aa40.08■■■■■ 4.01
MARK4-206ENST00000590897 CADPSQ9ULU8 1353 aa39.86■■■■□ 3.97
MARK4-206ENST00000590897 MRC2Q9UBG0 1479 aa39.76■■■■□ 3.96
MARK4-206ENST00000590897 WIZO95785 1651 aa39.74■■■■□ 3.95
MARK4-206ENST00000590897 WDR62O43379 1518 aa39.67■■■■□ 3.94
MARK4-206ENST00000590897 CEP164Q9UPV0 1460 aa39.53■■■■□ 3.92
MARK4-206ENST00000590897 FANCD2Q9BXW9 1451 aa39.43■■■■□ 3.9
MARK4-206ENST00000590897 TRIM41Q8WV44 630 aa39.42■■■■□ 3.9
MARK4-206ENST00000590897 CFTRP13569 1480 aa39.35■■■■□ 3.89
MARK4-206ENST00000590897 RSF1Q96T23 1441 aaPredicted RBP39.26■■■■□ 3.88
MARK4-206ENST00000590897 TOP2AP11388 1531 aaKnown RBP39.24■■■■□ 3.87
MARK4-206ENST00000590897 URB2Q14146 1524 aaKnown RBP39.12■■■■□ 3.85
MARK4-206ENST00000590897 OSCARQ8IYS5 282 aa39.06■■■■□ 3.84
MARK4-206ENST00000590897 PRDM2Q13029 1718 aa39■■■■□ 3.83
MARK4-206ENST00000590897 CCDC88BA6NC98 1476 aa38.76■■■■□ 3.8
MARK4-206ENST00000590897 IFT140Q96RY7 1462 aa38.74■■■■□ 3.79
MARK4-206ENST00000590897 ZNF608Q9ULD9 1512 aaPredicted RBP38.68■■■■□ 3.78
MARK4-206ENST00000590897 TOPBP1Q92547 1522 aa38.64■■■■□ 3.78
MARK4-206ENST00000590897 RIMBP3CA6NJZ7 1639 aa38.63■■■■□ 3.77
MARK4-206ENST00000590897 RIMBP3BA6NNM3 1639 aa38.63■■■■□ 3.77
MARK4-206ENST00000590897 RIMBP3Q9UFD9 1639 aa38.63■■■■□ 3.77
MARK4-206ENST00000590897 ABCC8Q09428 1581 aa38.56■■■■□ 3.76
MARK4-206ENST00000590897 EIF4G3O43432 1585 aaKnown RBP38.5■■■■□ 3.75
MARK4-206ENST00000590897 DNMBPQ6XZF7 1577 aa38.49■■■■□ 3.75
MARK4-206ENST00000590897 ARHGEF11O15085 1522 aa38.47■■■■□ 3.75
MARK4-206ENST00000590897 TARBP1Q13395 1621 aaKnown RBP38.34■■■■□ 3.73
MARK4-206ENST00000590897 CHD1O14646 1710 aa38.29■■■■□ 3.72
MARK4-206ENST00000590897 AQRO60306 1485 aaKnown RBP eCLIP38.28■■■■□ 3.72
MARK4-206ENST00000590897 POLA1P09884 1462 aaPredicted RBP38.22■■■■□ 3.71
MARK4-206ENST00000590897 CYB5RLQ6IPT4 315 aa38.15■■■■□ 3.7
MARK4-206ENST00000590897 FBLN2P98095 1184 aa38.1■■■■□ 3.69
MARK4-206ENST00000590897 ARAP1Q96P48 1450 aa38.06■■■■□ 3.68
MARK4-206ENST00000590897 RAD54L2Q9Y4B4 1467 aa38.06■■■■□ 3.68
MARK4-206ENST00000590897 SOGA1O94964 1423 aa38.03■■■■□ 3.68
MARK4-206ENST00000590897 TDRD9Q8NDG6 1382 aaKnown RBP37.98■■■■□ 3.67
MARK4-206ENST00000590897 WDR97A6NE52 1622 aa37.97■■■■□ 3.67
MARK4-206ENST00000590897 FGD5Q6ZNL6 1462 aa37.93■■■■□ 3.66
MARK4-206ENST00000590897 SNAPC4Q5SXM2 1469 aa37.91■■■■□ 3.66
MARK4-206ENST00000590897 TRHP20396 242 aaPredicted RBP37.87■■■■□ 3.65
MARK4-206ENST00000590897 CUX1P39880 1505 aa37.83■■■■□ 3.65
MARK4-206ENST00000590897 CLASP1Q7Z460 1538 aa37.83■■■■□ 3.65
MARK4-206ENST00000590897 MAGI1Q96QZ7 1491 aaPredicted RBP37.82■■■■□ 3.64
MARK4-206ENST00000590897 SYNJ1O43426 1573 aa37.8■■■■□ 3.64
MARK4-206ENST00000590897 CHMP7Q8WUX9 453 aaPredicted RBP37.78■■■■□ 3.64
MARK4-206ENST00000590897 GRIN2BQ13224 1484 aa37.77■■■■□ 3.64
MARK4-206ENST00000590897 SYNJ2O15056 1496 aa37.69■■■■□ 3.62
MARK4-206ENST00000590897 PBRM1Q86U86 1689 aa37.62■■■■□ 3.61
MARK4-206ENST00000590897 GAPVD1Q14C86 1478 aa37.58■■■■□ 3.61
MARK4-206ENST00000590897 ABCA10Q8WWZ4 1543 aa37.49■■■■□ 3.59
MARK4-206ENST00000590897 ABCA5Q8WWZ7 1642 aa37.48■■■■□ 3.59
MARK4-206ENST00000590897 GRIN2AQ12879 1464 aa37.28■■■■□ 3.56
MARK4-206ENST00000590897 WRNQ14191 1432 aaPredicted RBP eCLIP37.27■■■■□ 3.56
MARK4-206ENST00000590897 ADAMTS12P58397 1594 aa37.23■■■■□ 3.55
MARK4-206ENST00000590897 SUPT5HO00267 1087 aaKnown RBP37.21■■■■□ 3.55
MARK4-206ENST00000590897 ERCC6L2Q5T890 1561 aa37.18■■■■□ 3.54
MARK4-206ENST00000590897 NUP160Q12769 1436 aa37.17■■■■□ 3.54
MARK4-206ENST00000590897 BIVM-ERCC5R4GMW8 1640 aa37.16■■■■□ 3.54
MARK4-206ENST00000590897 CEP170Q5SW79 1584 aa37.16■■■■□ 3.54
MARK4-206ENST00000590897 TOP2BQ02880 1626 aa37.14■■■■□ 3.54
MARK4-206ENST00000590897 FHAD1B1AJZ9 1412 aa37.09■■■■□ 3.53
MARK4-206ENST00000590897 SHROOM2Q13796 1616 aa37.07■■■■□ 3.52
MARK4-206ENST00000590897 AEBP2Q6ZN18 517 aaPredicted RBP37.06■■■■□ 3.52
MARK4-206ENST00000590897 ERICH3Q5RHP9 1530 aa37.02■■■■□ 3.52
MARK4-206ENST00000590897 PRG4Q92954 1404 aaPredicted RBP36.83■■■■□ 3.49
MARK4-206ENST00000590897 KIF13AQ9H1H9 1805 aa36.78■■■■□ 3.48
MARK4-206ENST00000590897 JPH4Q96JJ6 628 aa36.74■■■■□ 3.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms