RNA–Protein interactions for RNA: ENST00000590890.1

LIN37-205, Transcript of lin-37 DREAM MuvB core complex component, humanhuman

TSL 2

Gene LIN37, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN37-205ENST00000590890 NISCHQ9Y2I1 1504 aa29.54■■■□□ 2.32
LIN37-205ENST00000590890 ABCC9O60706 1549 aa26.95■■□□□ 1.9
LIN37-205ENST00000590890 CCDC180Q9P1Z9 1646 aa26.76■■□□□ 1.87
LIN37-205ENST00000590890 RB1CC1Q8TDY2 1594 aa25.61■■□□□ 1.69
LIN37-205ENST00000590890 DNAJC5BQ9UF47 199 aa25.47■■□□□ 1.67
LIN37-205ENST00000590890 NACADO15069 1562 aa25.35■■□□□ 1.65
LIN37-205ENST00000590890 UNC13AQ9UPW8 1703 aa24.99■■□□□ 1.59
LIN37-205ENST00000590890 DCAF8L2P0C7V8 631 aa24.96■■□□□ 1.59
LIN37-205ENST00000590890 PABPN1Q86U42 306 aaKnown RBP eCLIP24.96■■□□□ 1.59
LIN37-205ENST00000590890 MYO15BQ96JP2 1530 aa24.91■■□□□ 1.58
LIN37-205ENST00000590890 BICRAQ9NZM4 1560 aa24.8■■□□□ 1.56
LIN37-205ENST00000590890 SHROOM4Q9ULL8 1493 aa24.59■■□□□ 1.53
LIN37-205ENST00000590890 DCAF1Q9Y4B6 1507 aa24.45■■□□□ 1.5
LIN37-205ENST00000590890 ZCCHC6Q5VYS8 1495 aaKnown RBP24.42■■□□□ 1.5
LIN37-205ENST00000590890 CC2D2AQ9P2K1 1620 aa24.38■■□□□ 1.49
LIN37-205ENST00000590890 CECR2Q9BXF3 1484 aa24.35■■□□□ 1.49
LIN37-205ENST00000590890 EIF4G1Q04637 1599 aaKnown RBP24.25■■□□□ 1.47
LIN37-205ENST00000590890 SCRIBQ14160 1630 aa24.25■■□□□ 1.47
LIN37-205ENST00000590890 DNAJC5Q9H3Z4 198 aa23.75■■□□□ 1.39
LIN37-205ENST00000590890 CUX2O14529 1486 aa23.48■■□□□ 1.35
LIN37-205ENST00000590890 ERCC6Q03468 1493 aa23.36■■□□□ 1.33
LIN37-205ENST00000590890 NCAPD3P42695 1498 aa23.36■■□□□ 1.33
LIN37-205ENST00000590890 ATAD2BQ9ULI0 1458 aa23.21■■□□□ 1.31
LIN37-205ENST00000590890 HMGXB3Q12766 1538 aa23.21■■□□□ 1.31
LIN37-205ENST00000590890 SMARCA2P51531 1590 aa23.21■■□□□ 1.31
LIN37-205ENST00000590890 SMARCA4P51532 1647 aa23.14■■□□□ 1.29
LIN37-205ENST00000590890 NESP48681 1621 aa23.02■■□□□ 1.28
LIN37-205ENST00000590890 BAZ1AQ9NRL2 1556 aaPredicted RBP23.01■■□□□ 1.27
LIN37-205ENST00000590890 BAZ1BQ9UIG0 1483 aaKnown RBP23■■□□□ 1.27
LIN37-205ENST00000590890 THOC2Q8NI27 1593 aaKnown RBP22.96■■□□□ 1.27
LIN37-205ENST00000590890 PEG3Q9GZU2 1588 aa22.95■■□□□ 1.26
LIN37-205ENST00000590890 LAMC3Q9Y6N6 1575 aa22.94■■□□□ 1.26
LIN37-205ENST00000590890 KIF21AQ7Z4S6 1674 aa22.81■■□□□ 1.24
LIN37-205ENST00000590890 PDS5BQ9NTI5 1447 aa22.8■■□□□ 1.24
LIN37-205ENST00000590890 MROH2BQ7Z745 1585 aa22.7■■□□□ 1.22
LIN37-205ENST00000590890 MRC2Q9UBG0 1479 aa22.61■■□□□ 1.21
LIN37-205ENST00000590890 CADPSQ9ULU8 1353 aa22.61■■□□□ 1.21
LIN37-205ENST00000590890 WDR62O43379 1518 aa22.57■■□□□ 1.2
LIN37-205ENST00000590890 TRIM41Q8WV44 630 aa22.53■■□□□ 1.2
LIN37-205ENST00000590890 CEP164Q9UPV0 1460 aa22.46■■□□□ 1.19
LIN37-205ENST00000590890 WIZO95785 1651 aa22.43■■□□□ 1.18
LIN37-205ENST00000590890 FANCD2Q9BXW9 1451 aa22.37■■□□□ 1.17
LIN37-205ENST00000590890 CFTRP13569 1480 aa22.29■■□□□ 1.16
LIN37-205ENST00000590890 OSCARQ8IYS5 282 aa22.26■■□□□ 1.15
LIN37-205ENST00000590890 TOP2AP11388 1531 aaKnown RBP22.19■■□□□ 1.14
LIN37-205ENST00000590890 URB2Q14146 1524 aaKnown RBP22.17■■□□□ 1.14
LIN37-205ENST00000590890 PRDM2Q13029 1718 aa22.15■■□□□ 1.14
LIN37-205ENST00000590890 RSF1Q96T23 1441 aaPredicted RBP22.11■■□□□ 1.13
LIN37-205ENST00000590890 RIMBP3CA6NJZ7 1639 aa22.05■■□□□ 1.12
LIN37-205ENST00000590890 RIMBP3BA6NNM3 1639 aa22.05■■□□□ 1.12
LIN37-205ENST00000590890 RIMBP3Q9UFD9 1639 aa22.05■■□□□ 1.12
LIN37-205ENST00000590890 IFT140Q96RY7 1462 aa22.02■■□□□ 1.12
LIN37-205ENST00000590890 ARHGEF11O15085 1522 aa21.95■■□□□ 1.1
LIN37-205ENST00000590890 ZNF608Q9ULD9 1512 aaPredicted RBP21.93■■□□□ 1.1
LIN37-205ENST00000590890 ABCC8Q09428 1581 aa21.91■■□□□ 1.1
LIN37-205ENST00000590890 TOPBP1Q92547 1522 aa21.9■■□□□ 1.1
LIN37-205ENST00000590890 EIF4G3O43432 1585 aaKnown RBP21.88■■□□□ 1.09
LIN37-205ENST00000590890 CCDC88BA6NC98 1476 aa21.86■■□□□ 1.09
LIN37-205ENST00000590890 DNMBPQ6XZF7 1577 aa21.83■■□□□ 1.09
LIN37-205ENST00000590890 CHD1O14646 1710 aa21.78■■□□□ 1.08
LIN37-205ENST00000590890 TARBP1Q13395 1621 aaKnown RBP21.74■■□□□ 1.07
LIN37-205ENST00000590890 CYB5RLQ6IPT4 315 aa21.72■■□□□ 1.07
LIN37-205ENST00000590890 AQRO60306 1485 aaKnown RBP eCLIP21.68■■□□□ 1.06
LIN37-205ENST00000590890 ARAP1Q96P48 1450 aa21.68■■□□□ 1.06
LIN37-205ENST00000590890 POLA1P09884 1462 aaPredicted RBP21.65■■□□□ 1.06
LIN37-205ENST00000590890 TRHP20396 242 aaPredicted RBP21.62■■□□□ 1.05
LIN37-205ENST00000590890 WDR97A6NE52 1622 aa21.62■■□□□ 1.05
LIN37-205ENST00000590890 FBLN2P98095 1184 aa21.61■■□□□ 1.05
LIN37-205ENST00000590890 SOGA1O94964 1423 aa21.53■■□□□ 1.04
LIN37-205ENST00000590890 CLASP1Q7Z460 1538 aa21.52■■□□□ 1.04
LIN37-205ENST00000590890 SYNJ1O43426 1573 aa21.52■■□□□ 1.04
LIN37-205ENST00000590890 RAD54L2Q9Y4B4 1467 aa21.52■■□□□ 1.03
LIN37-205ENST00000590890 SNAPC4Q5SXM2 1469 aa21.51■■□□□ 1.03
LIN37-205ENST00000590890 MAGI1Q96QZ7 1491 aaPredicted RBP21.5■■□□□ 1.03
LIN37-205ENST00000590890 TDRD9Q8NDG6 1382 aaKnown RBP21.48■■□□□ 1.03
LIN37-205ENST00000590890 FGD5Q6ZNL6 1462 aa21.46■■□□□ 1.03
LIN37-205ENST00000590890 CHMP7Q8WUX9 453 aaPredicted RBP21.43■■□□□ 1.02
LIN37-205ENST00000590890 GRIN2BQ13224 1484 aa21.43■■□□□ 1.02
LIN37-205ENST00000590890 SYNJ2O15056 1496 aa21.41■■□□□ 1.02
LIN37-205ENST00000590890 CUX1P39880 1505 aa21.37■■□□□ 1.01
LIN37-205ENST00000590890 PBRM1Q86U86 1689 aa21.35■■□□□ 1.01
LIN37-205ENST00000590890 GAPVD1Q14C86 1478 aa21.29■■□□□ 1
LIN37-205ENST00000590890 AEBP2Q6ZN18 517 aaPredicted RBP21.29■■□□□ 1
LIN37-205ENST00000590890 ABCA5Q8WWZ7 1642 aa21.24■□□□□ 0.99
LIN37-205ENST00000590890 ABCA10Q8WWZ4 1543 aa21.23■□□□□ 0.99
LIN37-205ENST00000590890 GRIN2AQ12879 1464 aa21.14■□□□□ 0.98
LIN37-205ENST00000590890 ADAMTS12P58397 1594 aa21.1■□□□□ 0.97
LIN37-205ENST00000590890 NUP160Q12769 1436 aa21.08■□□□□ 0.97
LIN37-205ENST00000590890 CEP170Q5SW79 1584 aa21.08■□□□□ 0.97
LIN37-205ENST00000590890 ERCC6L2Q5T890 1561 aa21.07■□□□□ 0.96
LIN37-205ENST00000590890 WRNQ14191 1432 aaPredicted RBP eCLIP21.07■□□□□ 0.96
LIN37-205ENST00000590890 SHROOM2Q13796 1616 aa21.06■□□□□ 0.96
LIN37-205ENST00000590890 FHAD1B1AJZ9 1412 aa21.02■□□□□ 0.96
LIN37-205ENST00000590890 BIVM-ERCC5R4GMW8 1640 aa21■□□□□ 0.95
LIN37-205ENST00000590890 TOP2BQ02880 1626 aa20.99■□□□□ 0.95
LIN37-205ENST00000590890 ERICH3Q5RHP9 1530 aa20.99■□□□□ 0.95
LIN37-205ENST00000590890 KIF13AQ9H1H9 1805 aa20.96■□□□□ 0.95
LIN37-205ENST00000590890 PRG4Q92954 1404 aaPredicted RBP20.88■□□□□ 0.93
LIN37-205ENST00000590890 RUSC2Q8N2Y8 1516 aa20.83■□□□□ 0.92
LIN37-205ENST00000590890 JPH4Q96JJ6 628 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms