RNA–Protein interactions for RNA: ENST00000590875.1

SLC39A3-206, Transcript of solute carrier family 39 member 3, humanhuman

TSL 2

Gene SLC39A3, Length 572 nt, Biotype processed transcript, Subcellular localisation Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A3-206ENST00000590875 NISCHQ9Y2I1 1504 aa50.88■■■■■ 5.74
SLC39A3-206ENST00000590875 CCDC180Q9P1Z9 1646 aa45.66■■■■■ 4.9
SLC39A3-206ENST00000590875 ABCC9O60706 1549 aa45.52■■■■■ 4.88
SLC39A3-206ENST00000590875 RB1CC1Q8TDY2 1594 aa43.37■■■■■ 4.53
SLC39A3-206ENST00000590875 NACADO15069 1562 aa43.09■■■■■ 4.49
SLC39A3-206ENST00000590875 DCAF8L2P0C7V8 631 aa42.91■■■■■ 4.46
SLC39A3-206ENST00000590875 DNAJC5BQ9UF47 199 aa42.58■■■■■ 4.41
SLC39A3-206ENST00000590875 UNC13AQ9UPW8 1703 aa42.55■■■■■ 4.4
SLC39A3-206ENST00000590875 MYO15BQ96JP2 1530 aa42.51■■■■■ 4.39
SLC39A3-206ENST00000590875 PABPN1Q86U42 306 aaKnown RBP eCLIP42.38■■■■■ 4.37
SLC39A3-206ENST00000590875 ZCCHC6Q5VYS8 1495 aaKnown RBP42.19■■■■■ 4.34
SLC39A3-206ENST00000590875 BICRAQ9NZM4 1560 aa42.14■■■■■ 4.34
SLC39A3-206ENST00000590875 DCAF1Q9Y4B6 1507 aa42.01■■■■■ 4.32
SLC39A3-206ENST00000590875 SCRIBQ14160 1630 aa41.62■■■■■ 4.25
SLC39A3-206ENST00000590875 SHROOM4Q9ULL8 1493 aa41.49■■■■■ 4.23
SLC39A3-206ENST00000590875 CC2D2AQ9P2K1 1620 aa41.15■■■■■ 4.18
SLC39A3-206ENST00000590875 EIF4G1Q04637 1599 aaKnown RBP41.08■■■■■ 4.17
SLC39A3-206ENST00000590875 CECR2Q9BXF3 1484 aa40.96■■■■■ 4.15
SLC39A3-206ENST00000590875 NCAPD3P42695 1498 aa39.75■■■■□ 3.95
SLC39A3-206ENST00000590875 SMARCA4P51532 1647 aa39.71■■■■□ 3.95
SLC39A3-206ENST00000590875 ATAD2BQ9ULI0 1458 aa39.66■■■■□ 3.94
SLC39A3-206ENST00000590875 SMARCA2P51531 1590 aa39.57■■■■□ 3.92
SLC39A3-206ENST00000590875 HMGXB3Q12766 1538 aa39.5■■■■□ 3.91
SLC39A3-206ENST00000590875 BAZ1AQ9NRL2 1556 aaPredicted RBP39.49■■■■□ 3.91
SLC39A3-206ENST00000590875 BAZ1BQ9UIG0 1483 aaKnown RBP39.3■■■■□ 3.88
SLC39A3-206ENST00000590875 PEG3Q9GZU2 1588 aa39.29■■■■□ 3.88
SLC39A3-206ENST00000590875 ERCC6Q03468 1493 aa39.27■■■■□ 3.88
SLC39A3-206ENST00000590875 MROH2BQ7Z745 1585 aa39.23■■■■□ 3.87
SLC39A3-206ENST00000590875 NESP48681 1621 aa39.15■■■■□ 3.86
SLC39A3-206ENST00000590875 CUX2O14529 1486 aa39.14■■■■□ 3.86
SLC39A3-206ENST00000590875 DNAJC5Q9H3Z4 198 aa38.98■■■■□ 3.83
SLC39A3-206ENST00000590875 LAMC3Q9Y6N6 1575 aa38.89■■■■□ 3.82
SLC39A3-206ENST00000590875 WIZO95785 1651 aa38.83■■■■□ 3.81
SLC39A3-206ENST00000590875 THOC2Q8NI27 1593 aaKnown RBP38.74■■■■□ 3.79
SLC39A3-206ENST00000590875 KIF21AQ7Z4S6 1674 aa38.73■■■■□ 3.79
SLC39A3-206ENST00000590875 PDS5BQ9NTI5 1447 aa38.61■■■■□ 3.77
SLC39A3-206ENST00000590875 CADPSQ9ULU8 1353 aa38.55■■■■□ 3.76
SLC39A3-206ENST00000590875 RSF1Q96T23 1441 aaPredicted RBP38.43■■■■□ 3.74
SLC39A3-206ENST00000590875 MRC2Q9UBG0 1479 aa38.29■■■■□ 3.72
SLC39A3-206ENST00000590875 TOP2AP11388 1531 aaKnown RBP38.28■■■■□ 3.72
SLC39A3-206ENST00000590875 WDR62O43379 1518 aa38.21■■■■□ 3.71
SLC39A3-206ENST00000590875 CEP164Q9UPV0 1460 aa38.16■■■■□ 3.7
SLC39A3-206ENST00000590875 CFTRP13569 1480 aa38.15■■■■□ 3.7
SLC39A3-206ENST00000590875 FANCD2Q9BXW9 1451 aa38.13■■■■□ 3.69
SLC39A3-206ENST00000590875 PRDM2Q13029 1718 aa37.93■■■■□ 3.66
SLC39A3-206ENST00000590875 CCDC88BA6NC98 1476 aa37.84■■■■□ 3.65
SLC39A3-206ENST00000590875 URB2Q14146 1524 aaKnown RBP37.83■■■■□ 3.65
SLC39A3-206ENST00000590875 TOPBP1Q92547 1522 aa37.44■■■■□ 3.58
SLC39A3-206ENST00000590875 IFT140Q96RY7 1462 aa37.39■■■■□ 3.58
SLC39A3-206ENST00000590875 OSCARQ8IYS5 282 aa37.38■■■■□ 3.57
SLC39A3-206ENST00000590875 TRIM41Q8WV44 630 aa37.35■■■■□ 3.57
SLC39A3-206ENST00000590875 ZNF608Q9ULD9 1512 aaPredicted RBP37.35■■■■□ 3.57
SLC39A3-206ENST00000590875 ABCC8Q09428 1581 aa37.34■■■■□ 3.57
SLC39A3-206ENST00000590875 DNMBPQ6XZF7 1577 aa37.33■■■■□ 3.57
SLC39A3-206ENST00000590875 EIF4G3O43432 1585 aaKnown RBP37.18■■■■□ 3.54
SLC39A3-206ENST00000590875 TARBP1Q13395 1621 aaKnown RBP37.14■■■■□ 3.54
SLC39A3-206ENST00000590875 POLA1P09884 1462 aaPredicted RBP37.06■■■■□ 3.52
SLC39A3-206ENST00000590875 AQRO60306 1485 aaKnown RBP eCLIP37.01■■■■□ 3.52
SLC39A3-206ENST00000590875 RIMBP3CA6NJZ7 1639 aa36.96■■■■□ 3.51
SLC39A3-206ENST00000590875 RIMBP3BA6NNM3 1639 aa36.96■■■■□ 3.51
SLC39A3-206ENST00000590875 RIMBP3Q9UFD9 1639 aa36.96■■■■□ 3.51
SLC39A3-206ENST00000590875 CHD1O14646 1710 aa36.95■■■■□ 3.51
SLC39A3-206ENST00000590875 RAD54L2Q9Y4B4 1467 aa36.94■■■■□ 3.5
SLC39A3-206ENST00000590875 SOGA1O94964 1423 aa36.88■■■■□ 3.49
SLC39A3-206ENST00000590875 FGD5Q6ZNL6 1462 aa36.86■■■■□ 3.49
SLC39A3-206ENST00000590875 CUX1P39880 1505 aa36.85■■■■□ 3.49
SLC39A3-206ENST00000590875 SUPT5HO00267 1087 aaKnown RBP36.83■■■■□ 3.49
SLC39A3-206ENST00000590875 ARHGEF11O15085 1522 aa36.8■■■■□ 3.48
SLC39A3-206ENST00000590875 TDRD9Q8NDG6 1382 aaKnown RBP36.79■■■■□ 3.48
SLC39A3-206ENST00000590875 FBLN2P98095 1184 aa36.74■■■■□ 3.47
SLC39A3-206ENST00000590875 WDR97A6NE52 1622 aa36.73■■■■□ 3.47
SLC39A3-206ENST00000590875 SNAPC4Q5SXM2 1469 aa36.64■■■■□ 3.46
SLC39A3-206ENST00000590875 GRIN2BQ13224 1484 aa36.54■■■■□ 3.44
SLC39A3-206ENST00000590875 MAGI1Q96QZ7 1491 aaPredicted RBP36.54■■■■□ 3.44
SLC39A3-206ENST00000590875 PBRM1Q86U86 1689 aa36.53■■■■□ 3.44
SLC39A3-206ENST00000590875 CYB5RLQ6IPT4 315 aa36.51■■■■□ 3.44
SLC39A3-206ENST00000590875 CHMP7Q8WUX9 453 aaPredicted RBP36.48■■■■□ 3.43
SLC39A3-206ENST00000590875 GAPVD1Q14C86 1478 aa36.44■■■■□ 3.42
SLC39A3-206ENST00000590875 ARAP1Q96P48 1450 aa36.44■■■■□ 3.42
SLC39A3-206ENST00000590875 CLASP1Q7Z460 1538 aa36.44■■■■□ 3.42
SLC39A3-206ENST00000590875 SYNJ1O43426 1573 aa36.43■■■■□ 3.42
SLC39A3-206ENST00000590875 ABCA10Q8WWZ4 1543 aa36.42■■■■□ 3.42
SLC39A3-206ENST00000590875 SYNJ2O15056 1496 aa36.42■■■■□ 3.42
SLC39A3-206ENST00000590875 ABCA5Q8WWZ7 1642 aa36.41■■■■□ 3.42
SLC39A3-206ENST00000590875 BIVM-ERCC5R4GMW8 1640 aa36.34■■■■□ 3.41
SLC39A3-206ENST00000590875 TOP2BQ02880 1626 aa36.3■■■■□ 3.4
SLC39A3-206ENST00000590875 WRNQ14191 1432 aaPredicted RBP eCLIP36.27■■■■□ 3.4
SLC39A3-206ENST00000590875 ADAMTS12P58397 1594 aa36.11■■■■□ 3.37
SLC39A3-206ENST00000590875 GRIN2AQ12879 1464 aa36.09■■■■□ 3.37
SLC39A3-206ENST00000590875 TRHP20396 242 aaPredicted RBP36.07■■■■□ 3.36
SLC39A3-206ENST00000590875 CEP170Q5SW79 1584 aa35.99■■■■□ 3.35
SLC39A3-206ENST00000590875 ERICH3Q5RHP9 1530 aa35.98■■■■□ 3.35
SLC39A3-206ENST00000590875 FHAD1B1AJZ9 1412 aa35.97■■■■□ 3.35
SLC39A3-206ENST00000590875 NUP160Q12769 1436 aa35.94■■■■□ 3.34
SLC39A3-206ENST00000590875 ERCC6L2Q5T890 1561 aa35.91■■■■□ 3.34
SLC39A3-206ENST00000590875 SHROOM2Q13796 1616 aa35.83■■■■□ 3.33
SLC39A3-206ENST00000590875 RUSC2Q8N2Y8 1516 aa35.61■■■■□ 3.29
SLC39A3-206ENST00000590875 PRG4Q92954 1404 aaPredicted RBP35.59■■■■□ 3.29
SLC39A3-206ENST00000590875 JPH4Q96JJ6 628 aa35.58■■■■□ 3.29
SLC39A3-206ENST00000590875 KIF27Q86VH2 1401 aa35.55■■■■□ 3.28
Retrieved 100 of 20,778 RNA–protein pairs in 136.1 ms