RNA–Protein interactions for RNA: ENST00000590789.1

TINCR-203, Transcript of TINCR ubiquitin domain containing, humanhuman

TSL 1 (best)

Gene TINCR, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TINCR-203ENST00000590789 NISCHQ9Y2I1 1504 aa31.84■■■□□ 2.69
TINCR-203ENST00000590789 CCDC180Q9P1Z9 1646 aa28.41■■■□□ 2.14
TINCR-203ENST00000590789 ABCC9O60706 1549 aa27.58■■■□□ 2.01
TINCR-203ENST00000590789 RB1CC1Q8TDY2 1594 aa26.65■■□□□ 1.86
TINCR-203ENST00000590789 NACADO15069 1562 aa26.63■■□□□ 1.85
TINCR-203ENST00000590789 ZCCHC6Q5VYS8 1495 aaKnown RBP26.55■■□□□ 1.84
TINCR-203ENST00000590789 MYO15BQ96JP2 1530 aa26.55■■□□□ 1.84
TINCR-203ENST00000590789 DCAF1Q9Y4B6 1507 aa26.43■■□□□ 1.82
TINCR-203ENST00000590789 DCAF8L2P0C7V8 631 aa26.3■■□□□ 1.8
TINCR-203ENST00000590789 UNC13AQ9UPW8 1703 aa26.12■■□□□ 1.77
TINCR-203ENST00000590789 BICRAQ9NZM4 1560 aa25.87■■□□□ 1.73
TINCR-203ENST00000590789 SCRIBQ14160 1630 aa25.79■■□□□ 1.72
TINCR-203ENST00000590789 PABPN1Q86U42 306 aaKnown RBP eCLIP25.68■■□□□ 1.7
TINCR-203ENST00000590789 SHROOM4Q9ULL8 1493 aa25.66■■□□□ 1.7
TINCR-203ENST00000590789 DNAJC5BQ9UF47 199 aa25.26■■□□□ 1.63
TINCR-203ENST00000590789 EIF4G1Q04637 1599 aaKnown RBP25.16■■□□□ 1.62
TINCR-203ENST00000590789 CC2D2AQ9P2K1 1620 aa25.03■■□□□ 1.6
TINCR-203ENST00000590789 CECR2Q9BXF3 1484 aa24.81■■□□□ 1.56
TINCR-203ENST00000590789 SMARCA4P51532 1647 aa24.73■■□□□ 1.55
TINCR-203ENST00000590789 BAZ1AQ9NRL2 1556 aaPredicted RBP24.68■■□□□ 1.54
TINCR-203ENST00000590789 SMARCA2P51531 1590 aa24.55■■□□□ 1.52
TINCR-203ENST00000590789 NCAPD3P42695 1498 aa24.55■■□□□ 1.52
TINCR-203ENST00000590789 PEG3Q9GZU2 1588 aa24.54■■□□□ 1.52
TINCR-203ENST00000590789 ATAD2BQ9ULI0 1458 aa24.54■■□□□ 1.52
TINCR-203ENST00000590789 MROH2BQ7Z745 1585 aa24.51■■□□□ 1.51
TINCR-203ENST00000590789 HMGXB3Q12766 1538 aa24.49■■□□□ 1.51
TINCR-203ENST00000590789 BAZ1BQ9UIG0 1483 aaKnown RBP24.32■■□□□ 1.48
TINCR-203ENST00000590789 WIZO95785 1651 aa24.26■■□□□ 1.47
TINCR-203ENST00000590789 RSF1Q96T23 1441 aaPredicted RBP24.21■■□□□ 1.47
TINCR-203ENST00000590789 TOP2AP11388 1531 aaKnown RBP24.04■■□□□ 1.44
TINCR-203ENST00000590789 LAMC3Q9Y6N6 1575 aa23.93■■□□□ 1.42
TINCR-203ENST00000590789 NESP48681 1621 aa23.89■■□□□ 1.42
TINCR-203ENST00000590789 CADPSQ9ULU8 1353 aa23.78■■□□□ 1.4
TINCR-203ENST00000590789 ERCC6Q03468 1493 aa23.77■■□□□ 1.4
TINCR-203ENST00000590789 KIF21AQ7Z4S6 1674 aa23.71■■□□□ 1.39
TINCR-203ENST00000590789 CFTRP13569 1480 aa23.69■■□□□ 1.38
TINCR-203ENST00000590789 CCDC88BA6NC98 1476 aa23.68■■□□□ 1.38
TINCR-203ENST00000590789 PDS5BQ9NTI5 1447 aa23.68■■□□□ 1.38
TINCR-203ENST00000590789 THOC2Q8NI27 1593 aaKnown RBP23.65■■□□□ 1.38
TINCR-203ENST00000590789 PRDM2Q13029 1718 aa23.64■■□□□ 1.38
TINCR-203ENST00000590789 CUX2O14529 1486 aa23.61■■□□□ 1.37
TINCR-203ENST00000590789 FANCD2Q9BXW9 1451 aa23.52■■□□□ 1.36
TINCR-203ENST00000590789 CEP164Q9UPV0 1460 aa23.5■■□□□ 1.35
TINCR-203ENST00000590789 MRC2Q9UBG0 1479 aa23.48■■□□□ 1.35
TINCR-203ENST00000590789 WDR62O43379 1518 aa23.45■■□□□ 1.34
TINCR-203ENST00000590789 SUPT5HO00267 1087 aaKnown RBP23.42■■□□□ 1.34
TINCR-203ENST00000590789 URB2Q14146 1524 aaKnown RBP23.31■■□□□ 1.32
TINCR-203ENST00000590789 ABCC8Q09428 1581 aa23.18■■□□□ 1.3
TINCR-203ENST00000590789 DNMBPQ6XZF7 1577 aa23.18■■□□□ 1.3
TINCR-203ENST00000590789 TOPBP1Q92547 1522 aa23.17■■□□□ 1.3
TINCR-203ENST00000590789 IFT140Q96RY7 1462 aa23.02■■□□□ 1.28
TINCR-203ENST00000590789 CUX1P39880 1505 aa23.01■■□□□ 1.27
TINCR-203ENST00000590789 POLA1P09884 1462 aaPredicted RBP22.98■■□□□ 1.27
TINCR-203ENST00000590789 TARBP1Q13395 1621 aaKnown RBP22.97■■□□□ 1.27
TINCR-203ENST00000590789 FGD5Q6ZNL6 1462 aa22.9■■□□□ 1.26
TINCR-203ENST00000590789 ZNF608Q9ULD9 1512 aaPredicted RBP22.88■■□□□ 1.25
TINCR-203ENST00000590789 BIVM-ERCC5R4GMW8 1640 aa22.88■■□□□ 1.25
TINCR-203ENST00000590789 EIF4G3O43432 1585 aaKnown RBP22.87■■□□□ 1.25
TINCR-203ENST00000590789 WDR97A6NE52 1622 aa22.85■■□□□ 1.25
TINCR-203ENST00000590789 TOP2BQ02880 1626 aa22.85■■□□□ 1.25
TINCR-203ENST00000590789 SYNJ1O43426 1573 aa22.82■■□□□ 1.24
TINCR-203ENST00000590789 WRNQ14191 1432 aaPredicted RBP eCLIP22.82■■□□□ 1.24
TINCR-203ENST00000590789 RAD54L2Q9Y4B4 1467 aa22.81■■□□□ 1.24
TINCR-203ENST00000590789 SOGA1O94964 1423 aa22.81■■□□□ 1.24
TINCR-203ENST00000590789 DNAJC5Q9H3Z4 198 aa22.76■■□□□ 1.23
TINCR-203ENST00000590789 AQRO60306 1485 aaKnown RBP eCLIP22.72■■□□□ 1.23
TINCR-203ENST00000590789 ABCA10Q8WWZ4 1543 aa22.72■■□□□ 1.23
TINCR-203ENST00000590789 ABCA5Q8WWZ7 1642 aa22.68■■□□□ 1.22
TINCR-203ENST00000590789 TDRD9Q8NDG6 1382 aaKnown RBP22.65■■□□□ 1.22
TINCR-203ENST00000590789 PBRM1Q86U86 1689 aa22.63■■□□□ 1.21
TINCR-203ENST00000590789 GRIN2BQ13224 1484 aa22.6■■□□□ 1.21
TINCR-203ENST00000590789 CHD1O14646 1710 aa22.59■■□□□ 1.21
TINCR-203ENST00000590789 GAPVD1Q14C86 1478 aa22.59■■□□□ 1.21
TINCR-203ENST00000590789 MAGI1Q96QZ7 1491 aaPredicted RBP22.57■■□□□ 1.2
TINCR-203ENST00000590789 SNAPC4Q5SXM2 1469 aa22.55■■□□□ 1.2
TINCR-203ENST00000590789 OSCARQ8IYS5 282 aa22.49■■□□□ 1.19
TINCR-203ENST00000590789 SYNJ2O15056 1496 aa22.47■■□□□ 1.19
TINCR-203ENST00000590789 ERICH3Q5RHP9 1530 aa22.47■■□□□ 1.19
TINCR-203ENST00000590789 ADAMTS12P58397 1594 aa22.44■■□□□ 1.18
TINCR-203ENST00000590789 CLASP1Q7Z460 1538 aa22.35■■□□□ 1.17
TINCR-203ENST00000590789 FHAD1B1AJZ9 1412 aa22.33■■□□□ 1.17
TINCR-203ENST00000590789 KIF27Q86VH2 1401 aa22.33■■□□□ 1.17
TINCR-203ENST00000590789 FBLN2P98095 1184 aa22.32■■□□□ 1.16
TINCR-203ENST00000590789 GRIN2AQ12879 1464 aa22.32■■□□□ 1.16
TINCR-203ENST00000590789 CHMP7Q8WUX9 453 aaPredicted RBP22.31■■□□□ 1.16
TINCR-203ENST00000590789 CUL7Q14999 1698 aa22.29■■□□□ 1.16
TINCR-203ENST00000590789 RIMBP3CA6NJZ7 1639 aa22.27■■□□□ 1.16
TINCR-203ENST00000590789 RIMBP3BA6NNM3 1639 aa22.27■■□□□ 1.16
TINCR-203ENST00000590789 RIMBP3Q9UFD9 1639 aa22.27■■□□□ 1.16
TINCR-203ENST00000590789 NUP160Q12769 1436 aa22.24■■□□□ 1.15
TINCR-203ENST00000590789 ARHGEF11O15085 1522 aa22.24■■□□□ 1.15
TINCR-203ENST00000590789 CEP170Q5SW79 1584 aa22.23■■□□□ 1.15
TINCR-203ENST00000590789 IGF1RP08069 1367 aa22.23■■□□□ 1.15
TINCR-203ENST00000590789 TRIM41Q8WV44 630 aa22.16■■□□□ 1.14
TINCR-203ENST00000590789 SHROOM2Q13796 1616 aa22.13■■□□□ 1.13
TINCR-203ENST00000590789 RUSC2Q8N2Y8 1516 aa22.12■■□□□ 1.13
TINCR-203ENST00000590789 CARMIL1Q5VZK9 1371 aa22.08■■□□□ 1.12
TINCR-203ENST00000590789 ARAP1Q96P48 1450 aa22.07■■□□□ 1.12
TINCR-203ENST00000590789 KIAA0586Q9BVV6 1533 aa22■■□□□ 1.11
TINCR-203ENST00000590789 RAPGEF2Q9Y4G8 1499 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms