RNA–Protein interactions for RNA: ENST00000590778.1

RFX2-216, Transcript of regulatory factor X2, humanhuman

TSL 2

Gene RFX2, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX2-216ENST00000590778 NISCHQ9Y2I1 1504 aa43.73■■■■■ 4.59
RFX2-216ENST00000590778 CCDC180Q9P1Z9 1646 aa39■■■■□ 3.83
RFX2-216ENST00000590778 ABCC9O60706 1549 aa38.11■■■■□ 3.69
RFX2-216ENST00000590778 RB1CC1Q8TDY2 1594 aa36.7■■■■□ 3.46
RFX2-216ENST00000590778 NACADO15069 1562 aa36.64■■■■□ 3.46
RFX2-216ENST00000590778 ZCCHC6Q5VYS8 1495 aaKnown RBP36.45■■■■□ 3.43
RFX2-216ENST00000590778 MYO15BQ96JP2 1530 aa36.43■■■■□ 3.42
RFX2-216ENST00000590778 DCAF8L2P0C7V8 631 aa36.36■■■■□ 3.41
RFX2-216ENST00000590778 DCAF1Q9Y4B6 1507 aa36.24■■■■□ 3.39
RFX2-216ENST00000590778 UNC13AQ9UPW8 1703 aa35.88■■■■□ 3.34
RFX2-216ENST00000590778 BICRAQ9NZM4 1560 aa35.59■■■■□ 3.29
RFX2-216ENST00000590778 PABPN1Q86U42 306 aaKnown RBP eCLIP35.51■■■■□ 3.28
RFX2-216ENST00000590778 SCRIBQ14160 1630 aa35.49■■■■□ 3.27
RFX2-216ENST00000590778 SHROOM4Q9ULL8 1493 aa35.29■■■■□ 3.24
RFX2-216ENST00000590778 DNAJC5BQ9UF47 199 aa34.98■■■■□ 3.19
RFX2-216ENST00000590778 EIF4G1Q04637 1599 aaKnown RBP34.65■■■■□ 3.14
RFX2-216ENST00000590778 CC2D2AQ9P2K1 1620 aa34.52■■■■□ 3.12
RFX2-216ENST00000590778 CECR2Q9BXF3 1484 aa34.27■■■■□ 3.08
RFX2-216ENST00000590778 SMARCA4P51532 1647 aa33.97■■■■□ 3.03
RFX2-216ENST00000590778 BAZ1AQ9NRL2 1556 aaPredicted RBP33.92■■■■□ 3.02
RFX2-216ENST00000590778 NCAPD3P42695 1498 aa33.78■■■■□ 3
RFX2-216ENST00000590778 ATAD2BQ9ULI0 1458 aa33.77■■■■□ 3
RFX2-216ENST00000590778 SMARCA2P51531 1590 aa33.77■■■■□ 3
RFX2-216ENST00000590778 MROH2BQ7Z745 1585 aa33.68■■■□□ 2.98
RFX2-216ENST00000590778 PEG3Q9GZU2 1588 aa33.68■■■□□ 2.98
RFX2-216ENST00000590778 HMGXB3Q12766 1538 aa33.67■■■□□ 2.98
RFX2-216ENST00000590778 BAZ1BQ9UIG0 1483 aaKnown RBP33.5■■■□□ 2.95
RFX2-216ENST00000590778 WIZO95785 1651 aa33.32■■■□□ 2.92
RFX2-216ENST00000590778 RSF1Q96T23 1441 aaPredicted RBP33.25■■■□□ 2.91
RFX2-216ENST00000590778 TOP2AP11388 1531 aaKnown RBP33■■■□□ 2.87
RFX2-216ENST00000590778 NESP48681 1621 aa32.96■■■□□ 2.87
RFX2-216ENST00000590778 LAMC3Q9Y6N6 1575 aa32.94■■■□□ 2.86
RFX2-216ENST00000590778 ERCC6Q03468 1493 aa32.86■■■□□ 2.85
RFX2-216ENST00000590778 CADPSQ9ULU8 1353 aa32.76■■■□□ 2.83
RFX2-216ENST00000590778 PDS5BQ9NTI5 1447 aa32.66■■■□□ 2.82
RFX2-216ENST00000590778 KIF21AQ7Z4S6 1674 aa32.62■■■□□ 2.81
RFX2-216ENST00000590778 CUX2O14529 1486 aa32.61■■■□□ 2.81
RFX2-216ENST00000590778 CFTRP13569 1480 aa32.58■■■□□ 2.81
RFX2-216ENST00000590778 THOC2Q8NI27 1593 aaKnown RBP32.58■■■□□ 2.81
RFX2-216ENST00000590778 CCDC88BA6NC98 1476 aa32.54■■■□□ 2.8
RFX2-216ENST00000590778 PRDM2Q13029 1718 aa32.41■■■□□ 2.78
RFX2-216ENST00000590778 FANCD2Q9BXW9 1451 aa32.4■■■□□ 2.78
RFX2-216ENST00000590778 CEP164Q9UPV0 1460 aa32.39■■■□□ 2.78
RFX2-216ENST00000590778 MRC2Q9UBG0 1479 aa32.36■■■□□ 2.77
RFX2-216ENST00000590778 WDR62O43379 1518 aa32.29■■■□□ 2.76
RFX2-216ENST00000590778 SUPT5HO00267 1087 aaKnown RBP32.21■■■□□ 2.75
RFX2-216ENST00000590778 URB2Q14146 1524 aaKnown RBP32.09■■■□□ 2.73
RFX2-216ENST00000590778 TOPBP1Q92547 1522 aa31.89■■■□□ 2.7
RFX2-216ENST00000590778 ABCC8Q09428 1581 aa31.89■■■□□ 2.7
RFX2-216ENST00000590778 DNMBPQ6XZF7 1577 aa31.87■■■□□ 2.69
RFX2-216ENST00000590778 IFT140Q96RY7 1462 aa31.71■■■□□ 2.67
RFX2-216ENST00000590778 CUX1P39880 1505 aa31.61■■■□□ 2.65
RFX2-216ENST00000590778 POLA1P09884 1462 aaPredicted RBP31.61■■■□□ 2.65
RFX2-216ENST00000590778 DNAJC5Q9H3Z4 198 aa31.61■■■□□ 2.65
RFX2-216ENST00000590778 TARBP1Q13395 1621 aaKnown RBP31.57■■■□□ 2.64
RFX2-216ENST00000590778 ZNF608Q9ULD9 1512 aaPredicted RBP31.54■■■□□ 2.64
RFX2-216ENST00000590778 FGD5Q6ZNL6 1462 aa31.52■■■□□ 2.64
RFX2-216ENST00000590778 EIF4G3O43432 1585 aaKnown RBP31.48■■■□□ 2.63
RFX2-216ENST00000590778 RAD54L2Q9Y4B4 1467 aa31.43■■■□□ 2.62
RFX2-216ENST00000590778 SOGA1O94964 1423 aa31.42■■■□□ 2.62
RFX2-216ENST00000590778 WDR97A6NE52 1622 aa31.38■■■□□ 2.61
RFX2-216ENST00000590778 BIVM-ERCC5R4GMW8 1640 aa31.37■■■□□ 2.61
RFX2-216ENST00000590778 WRNQ14191 1432 aaPredicted RBP eCLIP31.35■■■□□ 2.61
RFX2-216ENST00000590778 TOP2BQ02880 1626 aa31.35■■■□□ 2.61
RFX2-216ENST00000590778 AQRO60306 1485 aaKnown RBP eCLIP31.33■■■□□ 2.61
RFX2-216ENST00000590778 SYNJ1O43426 1573 aa31.32■■■□□ 2.6
RFX2-216ENST00000590778 TDRD9Q8NDG6 1382 aaKnown RBP31.24■■■□□ 2.59
RFX2-216ENST00000590778 ABCA10Q8WWZ4 1543 aa31.23■■■□□ 2.59
RFX2-216ENST00000590778 ABCA5Q8WWZ7 1642 aa31.15■■■□□ 2.58
RFX2-216ENST00000590778 OSCARQ8IYS5 282 aa31.12■■■□□ 2.57
RFX2-216ENST00000590778 GRIN2BQ13224 1484 aa31.12■■■□□ 2.57
RFX2-216ENST00000590778 PBRM1Q86U86 1689 aa31.1■■■□□ 2.57
RFX2-216ENST00000590778 CHD1O14646 1710 aa31.1■■■□□ 2.57
RFX2-216ENST00000590778 GAPVD1Q14C86 1478 aa31.09■■■□□ 2.57
RFX2-216ENST00000590778 SNAPC4Q5SXM2 1469 aa31.08■■■□□ 2.57
RFX2-216ENST00000590778 MAGI1Q96QZ7 1491 aaPredicted RBP31.07■■■□□ 2.56
RFX2-216ENST00000590778 SYNJ2O15056 1496 aa30.94■■■□□ 2.54
RFX2-216ENST00000590778 FBLN2P98095 1184 aa30.88■■■□□ 2.53
RFX2-216ENST00000590778 ERICH3Q5RHP9 1530 aa30.87■■■□□ 2.53
RFX2-216ENST00000590778 ADAMTS12P58397 1594 aa30.86■■■□□ 2.53
RFX2-216ENST00000590778 CHMP7Q8WUX9 453 aaPredicted RBP30.82■■■□□ 2.52
RFX2-216ENST00000590778 CLASP1Q7Z460 1538 aa30.78■■■□□ 2.52
RFX2-216ENST00000590778 FHAD1B1AJZ9 1412 aa30.74■■■□□ 2.51
RFX2-216ENST00000590778 RIMBP3CA6NJZ7 1639 aa30.73■■■□□ 2.51
RFX2-216ENST00000590778 RIMBP3BA6NNM3 1639 aa30.73■■■□□ 2.51
RFX2-216ENST00000590778 RIMBP3Q9UFD9 1639 aa30.73■■■□□ 2.51
RFX2-216ENST00000590778 GRIN2AQ12879 1464 aa30.72■■■□□ 2.51
RFX2-216ENST00000590778 ARHGEF11O15085 1522 aa30.72■■■□□ 2.51
RFX2-216ENST00000590778 KIF27Q86VH2 1401 aa30.7■■■□□ 2.5
RFX2-216ENST00000590778 NUP160Q12769 1436 aa30.61■■■□□ 2.49
RFX2-216ENST00000590778 CUL7Q14999 1698 aa30.59■■■□□ 2.49
RFX2-216ENST00000590778 CEP170Q5SW79 1584 aa30.59■■■□□ 2.49
RFX2-216ENST00000590778 IGF1RP08069 1367 aa30.55■■■□□ 2.48
RFX2-216ENST00000590778 ARAP1Q96P48 1450 aa30.47■■■□□ 2.47
RFX2-216ENST00000590778 TRIM41Q8WV44 630 aa30.47■■■□□ 2.47
RFX2-216ENST00000590778 SHROOM2Q13796 1616 aa30.42■■■□□ 2.46
RFX2-216ENST00000590778 RUSC2Q8N2Y8 1516 aa30.41■■■□□ 2.46
RFX2-216ENST00000590778 CARMIL1Q5VZK9 1371 aa30.38■■■□□ 2.45
RFX2-216ENST00000590778 CYB5RLQ6IPT4 315 aa30.31■■■□□ 2.44
RFX2-216ENST00000590778 ERCC6L2Q5T890 1561 aa30.29■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms