RNA–Protein interactions for RNA: ENST00000590775.5

CYTH1-213, Transcript of cytohesin 1, humanhuman

TSL 5

Gene CYTH1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH1-213ENST00000590775 NISCHQ9Y2I1 1504 aa50.46■■■■■ 5.67
CYTH1-213ENST00000590775 CCDC180Q9P1Z9 1646 aa45.2■■■■■ 4.83
CYTH1-213ENST00000590775 ABCC9O60706 1549 aa44.83■■■■■ 4.77
CYTH1-213ENST00000590775 RB1CC1Q8TDY2 1594 aa42.93■■■■■ 4.46
CYTH1-213ENST00000590775 NACADO15069 1562 aa42.73■■■■■ 4.43
CYTH1-213ENST00000590775 DCAF8L2P0C7V8 631 aa42.42■■■■■ 4.38
CYTH1-213ENST00000590775 MYO15BQ96JP2 1530 aa42.31■■■■■ 4.36
CYTH1-213ENST00000590775 ZCCHC6Q5VYS8 1495 aaKnown RBP41.85■■■■■ 4.29
CYTH1-213ENST00000590775 DCAF1Q9Y4B6 1507 aa41.81■■■■■ 4.28
CYTH1-213ENST00000590775 DNAJC5BQ9UF47 199 aa41.81■■■■■ 4.28
CYTH1-213ENST00000590775 PABPN1Q86U42 306 aaKnown RBP eCLIP41.77■■■■■ 4.28
CYTH1-213ENST00000590775 UNC13AQ9UPW8 1703 aa41.76■■■■■ 4.28
CYTH1-213ENST00000590775 BICRAQ9NZM4 1560 aa41.54■■■■■ 4.24
CYTH1-213ENST00000590775 SHROOM4Q9ULL8 1493 aa41.28■■■■■ 4.2
CYTH1-213ENST00000590775 SCRIBQ14160 1630 aa41.04■■■■■ 4.16
CYTH1-213ENST00000590775 EIF4G1Q04637 1599 aaKnown RBP40.55■■■■■ 4.08
CYTH1-213ENST00000590775 CC2D2AQ9P2K1 1620 aa40.55■■■■■ 4.08
CYTH1-213ENST00000590775 CECR2Q9BXF3 1484 aa40.45■■■■■ 4.07
CYTH1-213ENST00000590775 NCAPD3P42695 1498 aa39.44■■■■□ 3.9
CYTH1-213ENST00000590775 ATAD2BQ9ULI0 1458 aa39.28■■■■□ 3.88
CYTH1-213ENST00000590775 SMARCA4P51532 1647 aa39.25■■■■□ 3.87
CYTH1-213ENST00000590775 SMARCA2P51531 1590 aa39.25■■■■□ 3.87
CYTH1-213ENST00000590775 BAZ1AQ9NRL2 1556 aaPredicted RBP39.2■■■■□ 3.87
CYTH1-213ENST00000590775 HMGXB3Q12766 1538 aa39.14■■■■□ 3.86
CYTH1-213ENST00000590775 PEG3Q9GZU2 1588 aa38.97■■■■□ 3.83
CYTH1-213ENST00000590775 BAZ1BQ9UIG0 1483 aaKnown RBP38.92■■■■□ 3.82
CYTH1-213ENST00000590775 ERCC6Q03468 1493 aa38.79■■■■□ 3.8
CYTH1-213ENST00000590775 MROH2BQ7Z745 1585 aa38.79■■■■□ 3.8
CYTH1-213ENST00000590775 CUX2O14529 1486 aa38.72■■■■□ 3.79
CYTH1-213ENST00000590775 NESP48681 1621 aa38.54■■■■□ 3.76
CYTH1-213ENST00000590775 LAMC3Q9Y6N6 1575 aa38.5■■■■□ 3.75
CYTH1-213ENST00000590775 DNAJC5Q9H3Z4 198 aa38.4■■■■□ 3.74
CYTH1-213ENST00000590775 PDS5BQ9NTI5 1447 aa38.32■■■■□ 3.73
CYTH1-213ENST00000590775 WIZO95785 1651 aa38.3■■■■□ 3.72
CYTH1-213ENST00000590775 CADPSQ9ULU8 1353 aa38.24■■■■□ 3.71
CYTH1-213ENST00000590775 THOC2Q8NI27 1593 aaKnown RBP38.15■■■■□ 3.7
CYTH1-213ENST00000590775 RSF1Q96T23 1441 aaPredicted RBP38.14■■■■□ 3.7
CYTH1-213ENST00000590775 KIF21AQ7Z4S6 1674 aa38.05■■■■□ 3.68
CYTH1-213ENST00000590775 TOP2AP11388 1531 aaKnown RBP37.94■■■■□ 3.66
CYTH1-213ENST00000590775 MRC2Q9UBG0 1479 aa37.88■■■■□ 3.65
CYTH1-213ENST00000590775 CFTRP13569 1480 aa37.84■■■■□ 3.65
CYTH1-213ENST00000590775 CEP164Q9UPV0 1460 aa37.78■■■■□ 3.64
CYTH1-213ENST00000590775 WDR62O43379 1518 aa37.77■■■■□ 3.64
CYTH1-213ENST00000590775 FANCD2Q9BXW9 1451 aa37.75■■■■□ 3.63
CYTH1-213ENST00000590775 CCDC88BA6NC98 1476 aa37.49■■■■□ 3.59
CYTH1-213ENST00000590775 PRDM2Q13029 1718 aa37.4■■■■□ 3.58
CYTH1-213ENST00000590775 URB2Q14146 1524 aaKnown RBP37.36■■■■□ 3.57
CYTH1-213ENST00000590775 ABCC8Q09428 1581 aa37.16■■■■□ 3.54
CYTH1-213ENST00000590775 IFT140Q96RY7 1462 aa37.07■■■■□ 3.52
CYTH1-213ENST00000590775 TOPBP1Q92547 1522 aa37.04■■■■□ 3.52
CYTH1-213ENST00000590775 OSCARQ8IYS5 282 aa37.01■■■■□ 3.52
CYTH1-213ENST00000590775 DNMBPQ6XZF7 1577 aa36.95■■■■□ 3.51
CYTH1-213ENST00000590775 ZNF608Q9ULD9 1512 aaPredicted RBP36.83■■■■□ 3.49
CYTH1-213ENST00000590775 TARBP1Q13395 1621 aaKnown RBP36.67■■■■□ 3.46
CYTH1-213ENST00000590775 TRIM41Q8WV44 630 aa36.67■■■■□ 3.46
CYTH1-213ENST00000590775 POLA1P09884 1462 aaPredicted RBP36.67■■■■□ 3.46
CYTH1-213ENST00000590775 EIF4G3O43432 1585 aaKnown RBP36.66■■■■□ 3.46
CYTH1-213ENST00000590775 SOGA1O94964 1423 aa36.57■■■■□ 3.44
CYTH1-213ENST00000590775 SUPT5HO00267 1087 aaKnown RBP36.56■■■■□ 3.44
CYTH1-213ENST00000590775 AQRO60306 1485 aaKnown RBP eCLIP36.56■■■■□ 3.449e-7■■■■■ 31.4
CYTH1-213ENST00000590775 WDR97A6NE52 1622 aa36.48■■■■□ 3.43
CYTH1-213ENST00000590775 FGD5Q6ZNL6 1462 aa36.46■■■■□ 3.43
CYTH1-213ENST00000590775 RAD54L2Q9Y4B4 1467 aa36.46■■■■□ 3.43
CYTH1-213ENST00000590775 CUX1P39880 1505 aa36.44■■■■□ 3.42
CYTH1-213ENST00000590775 TDRD9Q8NDG6 1382 aaKnown RBP36.4■■■■□ 3.42
CYTH1-213ENST00000590775 RIMBP3CA6NJZ7 1639 aa36.33■■■■□ 3.41
CYTH1-213ENST00000590775 RIMBP3BA6NNM3 1639 aa36.33■■■■□ 3.41
CYTH1-213ENST00000590775 RIMBP3Q9UFD9 1639 aa36.33■■■■□ 3.41
CYTH1-213ENST00000590775 FBLN2P98095 1184 aa36.31■■■■□ 3.4
CYTH1-213ENST00000590775 CHD1O14646 1710 aa36.3■■■■□ 3.4
CYTH1-213ENST00000590775 ARHGEF11O15085 1522 aa36.29■■■■□ 3.4
CYTH1-213ENST00000590775 GRIN2BQ13224 1484 aa36.24■■■■□ 3.39
CYTH1-213ENST00000590775 MAGI1Q96QZ7 1491 aaPredicted RBP36.24■■■■□ 3.39
CYTH1-213ENST00000590775 SNAPC4Q5SXM2 1469 aa36.2■■■■□ 3.39
CYTH1-213ENST00000590775 CHMP7Q8WUX9 453 aaPredicted RBP36.17■■■■□ 3.38
CYTH1-213ENST00000590775 ABCA10Q8WWZ4 1543 aa36.14■■■■□ 3.38
CYTH1-213ENST00000590775 GAPVD1Q14C86 1478 aa36.11■■■■□ 3.37
CYTH1-213ENST00000590775 SYNJ2O15056 1496 aa36.09■■■■□ 3.37
CYTH1-213ENST00000590775 WRNQ14191 1432 aaPredicted RBP eCLIP36.08■■■■□ 3.37
CYTH1-213ENST00000590775 SYNJ1O43426 1573 aa36.04■■■■□ 3.36
CYTH1-213ENST00000590775 CYB5RLQ6IPT4 315 aa36.02■■■■□ 3.36
CYTH1-213ENST00000590775 TOP2BQ02880 1626 aa35.99■■■■□ 3.35
CYTH1-213ENST00000590775 ABCA5Q8WWZ7 1642 aa35.98■■■■□ 3.35
CYTH1-213ENST00000590775 PBRM1Q86U86 1689 aa35.98■■■■□ 3.35
CYTH1-213ENST00000590775 CLASP1Q7Z460 1538 aa35.98■■■■□ 3.35
CYTH1-213ENST00000590775 BIVM-ERCC5R4GMW8 1640 aa35.96■■■■□ 3.35
CYTH1-213ENST00000590775 ARAP1Q96P48 1450 aa35.92■■■■□ 3.34
CYTH1-213ENST00000590775 GRIN2AQ12879 1464 aa35.73■■■■□ 3.31
CYTH1-213ENST00000590775 ERICH3Q5RHP9 1530 aa35.72■■■■□ 3.31
CYTH1-213ENST00000590775 FHAD1B1AJZ9 1412 aa35.71■■■■□ 3.31
CYTH1-213ENST00000590775 ADAMTS12P58397 1594 aa35.69■■■■□ 3.3
CYTH1-213ENST00000590775 NUP160Q12769 1436 aa35.62■■■■□ 3.29
CYTH1-213ENST00000590775 TRHP20396 242 aaPredicted RBP35.56■■■■□ 3.28
CYTH1-213ENST00000590775 CEP170Q5SW79 1584 aa35.51■■■■□ 3.28
CYTH1-213ENST00000590775 SHROOM2Q13796 1616 aa35.4■■■■□ 3.26
CYTH1-213ENST00000590775 KIF27Q86VH2 1401 aa35.36■■■■□ 3.25
CYTH1-213ENST00000590775 JPH4Q96JJ6 628 aa35.3■■■■□ 3.24
CYTH1-213ENST00000590775 ERCC6L2Q5T890 1561 aa35.3■■■■□ 3.24
CYTH1-213ENST00000590775 IGF1RP08069 1367 aa35.28■■■■□ 3.24
CYTH1-213ENST00000590775 PRG4Q92954 1404 aaPredicted RBP35.24■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms