RNA–Protein interactions for RNA: ENST00000590749.2

ARID3A-206, Transcript of AT-rich interaction domain 3A, humanhuman

TSL 2

Gene ARID3A, Length 473 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3A-206ENST00000590749 NISCHQ9Y2I1 1504 aa33.14■■■□□ 2.9
ARID3A-206ENST00000590749 ABCC9O60706 1549 aa31.49■■■□□ 2.63
ARID3A-206ENST00000590749 DNAJC5BQ9UF47 199 aa30.51■■■□□ 2.47
ARID3A-206ENST00000590749 CCDC180Q9P1Z9 1646 aa30.36■■■□□ 2.45
ARID3A-206ENST00000590749 RB1CC1Q8TDY2 1594 aa29.5■■■□□ 2.31
ARID3A-206ENST00000590749 PABPN1Q86U42 306 aaKnown RBP eCLIP29.07■■■□□ 2.24
ARID3A-206ENST00000590749 DNAJC5Q9H3Z4 198 aa29.01■■■□□ 2.23
ARID3A-206ENST00000590749 NACADO15069 1562 aa28.97■■■□□ 2.23
ARID3A-206ENST00000590749 UNC13AQ9UPW8 1703 aa28.76■■■□□ 2.19
ARID3A-206ENST00000590749 BICRAQ9NZM4 1560 aa28.58■■■□□ 2.17
ARID3A-206ENST00000590749 DCAF8L2P0C7V8 631 aa28.52■■■□□ 2.16
ARID3A-206ENST00000590749 CECR2Q9BXF3 1484 aa28.52■■■□□ 2.16
ARID3A-206ENST00000590749 CC2D2AQ9P2K1 1620 aa28.4■■■□□ 2.14
ARID3A-206ENST00000590749 SHROOM4Q9ULL8 1493 aa28.2■■■□□ 2.1
ARID3A-206ENST00000590749 MYO15BQ96JP2 1530 aa28.15■■■□□ 2.1
ARID3A-206ENST00000590749 EIF4G1Q04637 1599 aaKnown RBP28.03■■■□□ 2.08
ARID3A-206ENST00000590749 CUX2O14529 1486 aa27.71■■■□□ 2.03
ARID3A-206ENST00000590749 SCRIBQ14160 1630 aa27.54■■■□□ 2
ARID3A-206ENST00000590749 ERCC6Q03468 1493 aa27.36■■□□□ 1.97
ARID3A-206ENST00000590749 DCAF1Q9Y4B6 1507 aa27.32■■□□□ 1.96
ARID3A-206ENST00000590749 TRIM41Q8WV44 630 aa27.28■■□□□ 1.96
ARID3A-206ENST00000590749 ZCCHC6Q5VYS8 1495 aaKnown RBP27.21■■□□□ 1.95
ARID3A-206ENST00000590749 NCAPD3P42695 1498 aa26.71■■□□□ 1.87
ARID3A-206ENST00000590749 THOC2Q8NI27 1593 aaKnown RBP26.7■■□□□ 1.86
ARID3A-206ENST00000590749 NESP48681 1621 aa26.66■■□□□ 1.86
ARID3A-206ENST00000590749 SMARCA2P51531 1590 aa26.47■■□□□ 1.83
ARID3A-206ENST00000590749 HMGXB3Q12766 1538 aa26.45■■□□□ 1.83
ARID3A-206ENST00000590749 ATAD2BQ9ULI0 1458 aa26.45■■□□□ 1.82
ARID3A-206ENST00000590749 LAMC3Q9Y6N6 1575 aa26.37■■□□□ 1.81
ARID3A-206ENST00000590749 KIF21AQ7Z4S6 1674 aa26.33■■□□□ 1.81
ARID3A-206ENST00000590749 BAZ1AQ9NRL2 1556 aaPredicted RBP26.29■■□□□ 1.8
ARID3A-206ENST00000590749 PDS5BQ9NTI5 1447 aa26.26■■□□□ 1.79
ARID3A-206ENST00000590749 OSCARQ8IYS5 282 aa26.2■■□□□ 1.78
ARID3A-206ENST00000590749 BAZ1BQ9UIG0 1483 aaKnown RBP26.18■■□□□ 1.78
ARID3A-206ENST00000590749 SMARCA4P51532 1647 aa26.14■■□□□ 1.78
ARID3A-206ENST00000590749 MRC2Q9UBG0 1479 aa26.1■■□□□ 1.77
ARID3A-206ENST00000590749 WDR62O43379 1518 aa26.06■■□□□ 1.76
ARID3A-206ENST00000590749 AEBP2Q6ZN18 517 aaPredicted RBP26.05■■□□□ 1.76
ARID3A-206ENST00000590749 RIMBP3CA6NJZ7 1639 aa26■■□□□ 1.75
ARID3A-206ENST00000590749 RIMBP3BA6NNM3 1639 aa26■■□□□ 1.75
ARID3A-206ENST00000590749 RIMBP3Q9UFD9 1639 aa26■■□□□ 1.75
ARID3A-206ENST00000590749 PEG3Q9GZU2 1588 aa25.89■■□□□ 1.73
ARID3A-206ENST00000590749 CADPSQ9ULU8 1353 aa25.85■■□□□ 1.73
ARID3A-206ENST00000590749 TRHP20396 242 aaPredicted RBP25.83■■□□□ 1.73
ARID3A-206ENST00000590749 ARHGEF11O15085 1522 aa25.79■■□□□ 1.72
ARID3A-206ENST00000590749 CEP164Q9UPV0 1460 aa25.76■■□□□ 1.71
ARID3A-206ENST00000590749 CYB5RLQ6IPT4 315 aa25.65■■□□□ 1.7
ARID3A-206ENST00000590749 FANCD2Q9BXW9 1451 aa25.58■■□□□ 1.69
ARID3A-206ENST00000590749 MROH2BQ7Z745 1585 aa25.49■■□□□ 1.67
ARID3A-206ENST00000590749 ARAP1Q96P48 1450 aa25.43■■□□□ 1.66
ARID3A-206ENST00000590749 URB2Q14146 1524 aaKnown RBP25.41■■□□□ 1.66
ARID3A-206ENST00000590749 CFTRP13569 1480 aa25.29■■□□□ 1.64
ARID3A-206ENST00000590749 ZNF608Q9ULD9 1512 aaPredicted RBP25.29■■□□□ 1.64
ARID3A-206ENST00000590749 IFT140Q96RY7 1462 aa25.28■■□□□ 1.64
ARID3A-206ENST00000590749 RSF1Q96T23 1441 aaPredicted RBP25.26■■□□□ 1.63
ARID3A-206ENST00000590749 CHD1O14646 1710 aa25.2■■□□□ 1.63
ARID3A-206ENST00000590749 EIF4G3O43432 1585 aaKnown RBP25.16■■□□□ 1.62
ARID3A-206ENST00000590749 WIZO95785 1651 aa25.15■■□□□ 1.62
ARID3A-206ENST00000590749 FBLN2P98095 1184 aa25.05■■□□□ 1.6
ARID3A-206ENST00000590749 PRDM2Q13029 1718 aa25.02■■□□□ 1.6
ARID3A-206ENST00000590749 ILDR1Q86SU0 546 aaPredicted RBP25.01■■□□□ 1.59
ARID3A-206ENST00000590749 TOPBP1Q92547 1522 aa24.95■■□□□ 1.58
ARID3A-206ENST00000590749 AQRO60306 1485 aaKnown RBP eCLIP24.9■■□□□ 1.586e-9■■■■□ 24.2
ARID3A-206ENST00000590749 ABCC8Q09428 1581 aa24.87■■□□□ 1.57
ARID3A-206ENST00000590749 CLASP1Q7Z460 1538 aa24.86■■□□□ 1.57
ARID3A-206ENST00000590749 SYNJ1O43426 1573 aa24.8■■□□□ 1.56
ARID3A-206ENST00000590749 TARBP1Q13395 1621 aaKnown RBP24.8■■□□□ 1.56
ARID3A-206ENST00000590749 TOP2AP11388 1531 aaKnown RBP24.79■■□□□ 1.56
ARID3A-206ENST00000590749 DNMBPQ6XZF7 1577 aa24.78■■□□□ 1.56
ARID3A-206ENST00000590749 GAPVD1Q14C86 1478 aa24.71■■□□□ 1.55
ARID3A-206ENST00000590749 SNAPC4Q5SXM2 1469 aa24.67■■□□□ 1.54
ARID3A-206ENST00000590749 CHMP7Q8WUX9 453 aaPredicted RBP24.67■■□□□ 1.54
ARID3A-206ENST00000590749 POLA1P09884 1462 aaPredicted RBP24.6■■□□□ 1.53
ARID3A-206ENST00000590749 MAGI1Q96QZ7 1491 aaPredicted RBP24.58■■□□□ 1.52
ARID3A-206ENST00000590749 WDR97A6NE52 1622 aa24.57■■□□□ 1.52
ARID3A-206ENST00000590749 TDRD9Q8NDG6 1382 aaKnown RBP24.56■■□□□ 1.52
ARID3A-206ENST00000590749 RAD54L2Q9Y4B4 1467 aa24.51■■□□□ 1.51
ARID3A-206ENST00000590749 SYNJ2O15056 1496 aa24.5■■□□□ 1.51
ARID3A-206ENST00000590749 SOGA1O94964 1423 aa24.48■■□□□ 1.51
ARID3A-206ENST00000590749 KIF13AQ9H1H9 1805 aa24.48■■□□□ 1.51
ARID3A-206ENST00000590749 CCDC88BA6NC98 1476 aa24.46■■□□□ 1.51
ARID3A-206ENST00000590749 KDM4FA0A1W2PPD8 638 aa24.45■■□□□ 1.5
ARID3A-206ENST00000590749 GRIN2BQ13224 1484 aa24.44■■□□□ 1.5
ARID3A-206ENST00000590749 ERCC6L2Q5T890 1561 aa24.33■■□□□ 1.48
ARID3A-206ENST00000590749 FGD5Q6ZNL6 1462 aa24.28■■□□□ 1.48
ARID3A-206ENST00000590749 KDM6BO15054 1643 aa24.28■■□□□ 1.48
ARID3A-206ENST00000590749 PBRM1Q86U86 1689 aa24.27■■□□□ 1.48
ARID3A-206ENST00000590749 FAM69CQ0P6D2 419 aa24.23■■□□□ 1.47
ARID3A-206ENST00000590749 CEP170Q5SW79 1584 aa24.22■■□□□ 1.47
ARID3A-206ENST00000590749 ABCC10Q5T3U5 1492 aa24.19■■□□□ 1.46
ARID3A-206ENST00000590749 HECW2Q9P2P5 1572 aa24.12■■□□□ 1.45
ARID3A-206ENST00000590749 GRIN2AQ12879 1464 aa24.11■■□□□ 1.45
ARID3A-206ENST00000590749 DIP2BQ9P265 1576 aa24.11■■□□□ 1.45
ARID3A-206ENST00000590749 SHROOM2Q13796 1616 aa24.1■■□□□ 1.45
ARID3A-206ENST00000590749 NPM1P06748 294 aaKnown RBP eCLIP24.08■■□□□ 1.45
ARID3A-206ENST00000590749 MAPKBP1O60336 1514 aa24.06■■□□□ 1.44
ARID3A-206ENST00000590749 FBXO41Q8TF61 875 aa24.06■■□□□ 1.44
ARID3A-206ENST00000590749 NUP160Q12769 1436 aa24.05■■□□□ 1.44
ARID3A-206ENST00000590749 ADGRL1O94910 1474 aa24.05■■□□□ 1.44
ARID3A-206ENST00000590749 CUX1P39880 1505 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms