RNA–Protein interactions for RNA: ENST00000590709.3

POLRMT-206, Transcript of RNA polymerase mitochondrial, humanhuman

TSL 2

Gene POLRMT, Length 1,106 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLRMT-206ENST00000590709 NISCHQ9Y2I1 1504 aa41.23■■■■■ 4.19
POLRMT-206ENST00000590709 ABCC9O60706 1549 aa36.86■■■■□ 3.49
POLRMT-206ENST00000590709 CCDC180Q9P1Z9 1646 aa36.81■■■■□ 3.48
POLRMT-206ENST00000590709 RB1CC1Q8TDY2 1594 aa35.04■■■■□ 3.2
POLRMT-206ENST00000590709 DCAF8L2P0C7V8 631 aa34.89■■■■□ 3.18
POLRMT-206ENST00000590709 NACADO15069 1562 aa34.85■■■■□ 3.17
POLRMT-206ENST00000590709 DNAJC5BQ9UF47 199 aa34.62■■■■□ 3.13
POLRMT-206ENST00000590709 PABPN1Q86U42 306 aaKnown RBP eCLIP34.44■■■■□ 3.1
POLRMT-206ENST00000590709 MYO15BQ96JP2 1530 aa34.41■■■■□ 3.1
POLRMT-206ENST00000590709 UNC13AQ9UPW8 1703 aa34.21■■■■□ 3.07
POLRMT-206ENST00000590709 ZCCHC6Q5VYS8 1495 aaKnown RBP34.16■■■■□ 3.06
POLRMT-206ENST00000590709 BICRAQ9NZM4 1560 aa34.07■■■■□ 3.05
POLRMT-206ENST00000590709 DCAF1Q9Y4B6 1507 aa34.02■■■■□ 3.04
POLRMT-206ENST00000590709 SCRIBQ14160 1630 aa33.63■■■□□ 2.97
POLRMT-206ENST00000590709 SHROOM4Q9ULL8 1493 aa33.54■■■□□ 2.96
POLRMT-206ENST00000590709 CC2D2AQ9P2K1 1620 aa33.25■■■□□ 2.91
POLRMT-206ENST00000590709 EIF4G1Q04637 1599 aaKnown RBP33.21■■■□□ 2.91
POLRMT-206ENST00000590709 CECR2Q9BXF3 1484 aa33.18■■■□□ 2.9
POLRMT-206ENST00000590709 NCAPD3P42695 1498 aa32.24■■■□□ 2.75
POLRMT-206ENST00000590709 ATAD2BQ9ULI0 1458 aa32.16■■■□□ 2.74
POLRMT-206ENST00000590709 SMARCA4P51532 1647 aa32.08■■■□□ 2.73
POLRMT-206ENST00000590709 SMARCA2P51531 1590 aa32■■■□□ 2.71
POLRMT-206ENST00000590709 BAZ1AQ9NRL2 1556 aaPredicted RBP31.94■■■□□ 2.7
POLRMT-206ENST00000590709 HMGXB3Q12766 1538 aa31.92■■■□□ 2.7
POLRMT-206ENST00000590709 BAZ1BQ9UIG0 1483 aaKnown RBP31.81■■■□□ 2.68
POLRMT-206ENST00000590709 MROH2BQ7Z745 1585 aa31.79■■■□□ 2.68
POLRMT-206ENST00000590709 ERCC6Q03468 1493 aa31.78■■■□□ 2.68
POLRMT-206ENST00000590709 PEG3Q9GZU2 1588 aa31.77■■■□□ 2.68
POLRMT-206ENST00000590709 NESP48681 1621 aa31.71■■■□□ 2.67
POLRMT-206ENST00000590709 DNAJC5Q9H3Z4 198 aa31.66■■■□□ 2.66
POLRMT-206ENST00000590709 CUX2O14529 1486 aa31.65■■■□□ 2.66
POLRMT-206ENST00000590709 LAMC3Q9Y6N6 1575 aa31.41■■■□□ 2.62
POLRMT-206ENST00000590709 WIZO95785 1651 aa31.37■■■□□ 2.61
POLRMT-206ENST00000590709 PDS5BQ9NTI5 1447 aa31.3■■■□□ 2.6
POLRMT-206ENST00000590709 CADPSQ9ULU8 1353 aa31.3■■■□□ 2.6
POLRMT-206ENST00000590709 THOC2Q8NI27 1593 aaKnown RBP31.26■■■□□ 2.6
POLRMT-206ENST00000590709 RSF1Q96T23 1441 aaPredicted RBP31.21■■■□□ 2.59
POLRMT-206ENST00000590709 KIF21AQ7Z4S6 1674 aa31.19■■■□□ 2.58
POLRMT-206ENST00000590709 MRC2Q9UBG0 1479 aa30.99■■■□□ 2.55
POLRMT-206ENST00000590709 TOP2AP11388 1531 aaKnown RBP30.96■■■□□ 2.55
POLRMT-206ENST00000590709 CFTRP13569 1480 aa30.93■■■□□ 2.54
POLRMT-206ENST00000590709 FANCD2Q9BXW9 1451 aa30.89■■■□□ 2.54
POLRMT-206ENST00000590709 WDR62O43379 1518 aa30.89■■■□□ 2.54
POLRMT-206ENST00000590709 CEP164Q9UPV0 1460 aa30.88■■■□□ 2.53
POLRMT-206ENST00000590709 CCDC88BA6NC98 1476 aa30.7■■■□□ 2.5
POLRMT-206ENST00000590709 URB2Q14146 1524 aaKnown RBP30.64■■■□□ 2.5
POLRMT-206ENST00000590709 PRDM2Q13029 1718 aa30.44■■■□□ 2.46
POLRMT-206ENST00000590709 OSCARQ8IYS5 282 aa30.36■■■□□ 2.45
POLRMT-206ENST00000590709 TOPBP1Q92547 1522 aa30.32■■■□□ 2.44
POLRMT-206ENST00000590709 TRIM41Q8WV44 630 aa30.31■■■□□ 2.44
POLRMT-206ENST00000590709 IFT140Q96RY7 1462 aa30.28■■■□□ 2.44
POLRMT-206ENST00000590709 ZNF608Q9ULD9 1512 aaPredicted RBP30.27■■■□□ 2.44
POLRMT-206ENST00000590709 ABCC8Q09428 1581 aa30.24■■■□□ 2.43
POLRMT-206ENST00000590709 DNMBPQ6XZF7 1577 aa30.17■■■□□ 2.42
POLRMT-206ENST00000590709 AQRO60306 1485 aaKnown RBP eCLIP30.04■■■□□ 2.4
POLRMT-206ENST00000590709 POLA1P09884 1462 aaPredicted RBP30.02■■■□□ 2.4
POLRMT-206ENST00000590709 TARBP1Q13395 1621 aaKnown RBP30.01■■■□□ 2.39
POLRMT-206ENST00000590709 EIF4G3O43432 1585 aaKnown RBP30■■■□□ 2.39
POLRMT-206ENST00000590709 SUPT5HO00267 1087 aaKnown RBP29.98■■■□□ 2.39
POLRMT-206ENST00000590709 RAD54L2Q9Y4B4 1467 aa29.96■■■□□ 2.39
POLRMT-206ENST00000590709 SOGA1O94964 1423 aa29.93■■■□□ 2.38
POLRMT-206ENST00000590709 TDRD9Q8NDG6 1382 aaKnown RBP29.89■■■□□ 2.37
POLRMT-206ENST00000590709 CUX1P39880 1505 aa29.85■■■□□ 2.37
POLRMT-206ENST00000590709 FBLN2P98095 1184 aa29.84■■■□□ 2.37
POLRMT-206ENST00000590709 FGD5Q6ZNL6 1462 aa29.84■■■□□ 2.37
POLRMT-206ENST00000590709 RIMBP3CA6NJZ7 1639 aa29.82■■■□□ 2.36
POLRMT-206ENST00000590709 RIMBP3BA6NNM3 1639 aa29.82■■■□□ 2.36
POLRMT-206ENST00000590709 RIMBP3Q9UFD9 1639 aa29.82■■■□□ 2.36
POLRMT-206ENST00000590709 ARHGEF11O15085 1522 aa29.77■■■□□ 2.36
POLRMT-206ENST00000590709 CHD1O14646 1710 aa29.74■■■□□ 2.35
POLRMT-206ENST00000590709 CYB5RLQ6IPT4 315 aa29.67■■■□□ 2.34
POLRMT-206ENST00000590709 SNAPC4Q5SXM2 1469 aa29.67■■■□□ 2.34
POLRMT-206ENST00000590709 WDR97A6NE52 1622 aa29.64■■■□□ 2.34
POLRMT-206ENST00000590709 CHMP7Q8WUX9 453 aaPredicted RBP29.63■■■□□ 2.33
POLRMT-206ENST00000590709 GRIN2BQ13224 1484 aa29.61■■■□□ 2.33
POLRMT-206ENST00000590709 MAGI1Q96QZ7 1491 aaPredicted RBP29.56■■■□□ 2.32
POLRMT-206ENST00000590709 GAPVD1Q14C86 1478 aa29.53■■■□□ 2.32
POLRMT-206ENST00000590709 ABCA10Q8WWZ4 1543 aa29.51■■■□□ 2.32
POLRMT-206ENST00000590709 ARAP1Q96P48 1450 aa29.5■■■□□ 2.31
POLRMT-206ENST00000590709 SYNJ2O15056 1496 aa29.48■■■□□ 2.31
POLRMT-206ENST00000590709 CLASP1Q7Z460 1538 aa29.45■■■□□ 2.31
POLRMT-206ENST00000590709 WRNQ14191 1432 aaPredicted RBP eCLIP29.43■■■□□ 2.3
POLRMT-206ENST00000590709 SYNJ1O43426 1573 aa29.42■■■□□ 2.3
POLRMT-206ENST00000590709 ABCA5Q8WWZ7 1642 aa29.39■■■□□ 2.3
POLRMT-206ENST00000590709 PBRM1Q86U86 1689 aa29.39■■■□□ 2.3
POLRMT-206ENST00000590709 TOP2BQ02880 1626 aa29.34■■■□□ 2.29
POLRMT-206ENST00000590709 BIVM-ERCC5R4GMW8 1640 aa29.31■■■□□ 2.28
POLRMT-206ENST00000590709 TRHP20396 242 aaPredicted RBP29.27■■■□□ 2.28
POLRMT-206ENST00000590709 GRIN2AQ12879 1464 aa29.22■■■□□ 2.27
POLRMT-206ENST00000590709 ADAMTS12P58397 1594 aa29.17■■■□□ 2.26
POLRMT-206ENST00000590709 FHAD1B1AJZ9 1412 aa29.16■■■□□ 2.26
POLRMT-206ENST00000590709 NUP160Q12769 1436 aa29.13■■■□□ 2.25
POLRMT-206ENST00000590709 ERICH3Q5RHP9 1530 aa29.11■■■□□ 2.25
POLRMT-206ENST00000590709 CEP170Q5SW79 1584 aa29.09■■■□□ 2.25
POLRMT-206ENST00000590709 ERCC6L2Q5T890 1561 aa29.05■■■□□ 2.24
POLRMT-206ENST00000590709 JPH4Q96JJ6 628 aa28.94■■■□□ 2.22
POLRMT-206ENST00000590709 SHROOM2Q13796 1616 aa28.93■■■□□ 2.22
POLRMT-206ENST00000590709 IGF1RP08069 1367 aa28.89■■■□□ 2.22
POLRMT-206ENST00000590709 PRG4Q92954 1404 aaPredicted RBP28.87■■■□□ 2.21
POLRMT-206ENST00000590709 KIF27Q86VH2 1401 aa28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms