RNA–Protein interactions for RNA: ENST00000590701.5

ERCC1-211, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 3

Gene ERCC1, Length 345 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-211ENST00000590701 NISCHQ9Y2I1 1504 aa37.25■■■■□ 3.55
ERCC1-211ENST00000590701 ABCC9O60706 1549 aa34.18■■■■□ 3.06
ERCC1-211ENST00000590701 CCDC180Q9P1Z9 1646 aa33.52■■■□□ 2.96
ERCC1-211ENST00000590701 DNAJC5BQ9UF47 199 aa32.63■■■□□ 2.81
ERCC1-211ENST00000590701 RB1CC1Q8TDY2 1594 aa32.19■■■□□ 2.74
ERCC1-211ENST00000590701 DCAF8L2P0C7V8 631 aa31.89■■■□□ 2.7
ERCC1-211ENST00000590701 PABPN1Q86U42 306 aaKnown RBP eCLIP31.85■■■□□ 2.69
ERCC1-211ENST00000590701 NACADO15069 1562 aa31.85■■■□□ 2.69
ERCC1-211ENST00000590701 UNC13AQ9UPW8 1703 aa31.56■■■□□ 2.64
ERCC1-211ENST00000590701 BICRAQ9NZM4 1560 aa31.34■■■□□ 2.61
ERCC1-211ENST00000590701 MYO15BQ96JP2 1530 aa31.18■■■□□ 2.58
ERCC1-211ENST00000590701 CC2D2AQ9P2K1 1620 aa30.8■■■□□ 2.52
ERCC1-211ENST00000590701 CECR2Q9BXF3 1484 aa30.79■■■□□ 2.52
ERCC1-211ENST00000590701 ZCCHC6Q5VYS8 1495 aaKnown RBP30.71■■■□□ 2.51
ERCC1-211ENST00000590701 SHROOM4Q9ULL8 1493 aa30.65■■■□□ 2.5
ERCC1-211ENST00000590701 SCRIBQ14160 1630 aa30.65■■■□□ 2.5
ERCC1-211ENST00000590701 DCAF1Q9Y4B6 1507 aa30.63■■■□□ 2.49
ERCC1-211ENST00000590701 EIF4G1Q04637 1599 aaKnown RBP30.58■■■□□ 2.49
ERCC1-211ENST00000590701 DNAJC5Q9H3Z4 198 aa30.21■■■□□ 2.43
ERCC1-211ENST00000590701 CUX2O14529 1486 aa29.51■■■□□ 2.31
ERCC1-211ENST00000590701 ERCC6Q03468 1493 aa29.48■■■□□ 2.31
ERCC1-211ENST00000590701 NCAPD3P42695 1498 aa29.45■■■□□ 2.31
ERCC1-211ENST00000590701 ATAD2BQ9ULI0 1458 aa29.32■■■□□ 2.28
ERCC1-211ENST00000590701 NESP48681 1621 aa29.25■■■□□ 2.27
ERCC1-211ENST00000590701 SMARCA4P51532 1647 aa29.14■■■□□ 2.26
ERCC1-211ENST00000590701 SMARCA2P51531 1590 aa29.13■■■□□ 2.25
ERCC1-211ENST00000590701 HMGXB3Q12766 1538 aa29.11■■■□□ 2.25
ERCC1-211ENST00000590701 BAZ1BQ9UIG0 1483 aaKnown RBP28.98■■■□□ 2.23
ERCC1-211ENST00000590701 THOC2Q8NI27 1593 aaKnown RBP28.92■■■□□ 2.22
ERCC1-211ENST00000590701 BAZ1AQ9NRL2 1556 aaPredicted RBP28.89■■■□□ 2.22
ERCC1-211ENST00000590701 LAMC3Q9Y6N6 1575 aa28.82■■■□□ 2.2
ERCC1-211ENST00000590701 PEG3Q9GZU2 1588 aa28.8■■■□□ 2.2
ERCC1-211ENST00000590701 KIF21AQ7Z4S6 1674 aa28.8■■■□□ 2.2
ERCC1-211ENST00000590701 TRIM41Q8WV44 630 aa28.76■■■□□ 2.19
ERCC1-211ENST00000590701 MROH2BQ7Z745 1585 aa28.75■■■□□ 2.19
ERCC1-211ENST00000590701 PDS5BQ9NTI5 1447 aa28.7■■■□□ 2.19
ERCC1-211ENST00000590701 CADPSQ9ULU8 1353 aa28.56■■■□□ 2.16
ERCC1-211ENST00000590701 MRC2Q9UBG0 1479 aa28.48■■■□□ 2.15
ERCC1-211ENST00000590701 WDR62O43379 1518 aa28.4■■■□□ 2.14
ERCC1-211ENST00000590701 WIZO95785 1651 aa28.4■■■□□ 2.14
ERCC1-211ENST00000590701 CEP164Q9UPV0 1460 aa28.27■■■□□ 2.12
ERCC1-211ENST00000590701 OSCARQ8IYS5 282 aa28.24■■■□□ 2.11
ERCC1-211ENST00000590701 FANCD2Q9BXW9 1451 aa28.23■■■□□ 2.11
ERCC1-211ENST00000590701 CFTRP13569 1480 aa28.1■■■□□ 2.09
ERCC1-211ENST00000590701 URB2Q14146 1524 aaKnown RBP28.06■■■□□ 2.08
ERCC1-211ENST00000590701 RSF1Q96T23 1441 aaPredicted RBP27.97■■■□□ 2.07
ERCC1-211ENST00000590701 TOP2AP11388 1531 aaKnown RBP27.89■■■□□ 2.06
ERCC1-211ENST00000590701 RIMBP3CA6NJZ7 1639 aa27.87■■■□□ 2.05
ERCC1-211ENST00000590701 RIMBP3BA6NNM3 1639 aa27.87■■■□□ 2.05
ERCC1-211ENST00000590701 RIMBP3Q9UFD9 1639 aa27.87■■■□□ 2.05
ERCC1-211ENST00000590701 ZNF608Q9ULD9 1512 aaPredicted RBP27.82■■■□□ 2.04
ERCC1-211ENST00000590701 PRDM2Q13029 1718 aa27.74■■■□□ 2.03
ERCC1-211ENST00000590701 IFT140Q96RY7 1462 aa27.72■■■□□ 2.03
ERCC1-211ENST00000590701 ARHGEF11O15085 1522 aa27.7■■■□□ 2.02
ERCC1-211ENST00000590701 CCDC88BA6NC98 1476 aa27.7■■■□□ 2.02
ERCC1-211ENST00000590701 CYB5RLQ6IPT4 315 aa27.68■■■□□ 2.02
ERCC1-211ENST00000590701 TOPBP1Q92547 1522 aa27.64■■■□□ 2.02
ERCC1-211ENST00000590701 EIF4G3O43432 1585 aaKnown RBP27.55■■■□□ 2
ERCC1-211ENST00000590701 AQRO60306 1485 aaKnown RBP eCLIP27.53■■■□□ 21e-18■■■■■ 53.6
ERCC1-211ENST00000590701 TRHP20396 242 aaPredicted RBP27.52■■■□□ 2
ERCC1-211ENST00000590701 FBLN2P98095 1184 aa27.51■■□□□ 1.99
ERCC1-211ENST00000590701 CHD1O14646 1710 aa27.5■■□□□ 1.99
ERCC1-211ENST00000590701 ABCC8Q09428 1581 aa27.48■■□□□ 1.99
ERCC1-211ENST00000590701 DNMBPQ6XZF7 1577 aa27.45■■□□□ 1.99
ERCC1-211ENST00000590701 TARBP1Q13395 1621 aaKnown RBP27.43■■□□□ 1.98
ERCC1-211ENST00000590701 ARAP1Q96P48 1450 aa27.41■■□□□ 1.98
ERCC1-211ENST00000590701 POLA1P09884 1462 aaPredicted RBP27.32■■□□□ 1.96
ERCC1-211ENST00000590701 RAD54L2Q9Y4B4 1467 aa27.32■■□□□ 1.96
ERCC1-211ENST00000590701 TDRD9Q8NDG6 1382 aaKnown RBP27.3■■□□□ 1.96
ERCC1-211ENST00000590701 SOGA1O94964 1423 aa27.24■■□□□ 1.95
ERCC1-211ENST00000590701 CHMP7Q8WUX9 453 aaPredicted RBP27.17■■□□□ 1.94
ERCC1-211ENST00000590701 SNAPC4Q5SXM2 1469 aa27.16■■□□□ 1.94
ERCC1-211ENST00000590701 CLASP1Q7Z460 1538 aa27.11■■□□□ 1.93
ERCC1-211ENST00000590701 FGD5Q6ZNL6 1462 aa27.1■■□□□ 1.93
ERCC1-211ENST00000590701 AEBP2Q6ZN18 517 aaPredicted RBP27.04■■□□□ 1.92
ERCC1-211ENST00000590701 SYNJ1O43426 1573 aa27.03■■□□□ 1.92
ERCC1-211ENST00000590701 CUX1P39880 1505 aa27.01■■□□□ 1.91
ERCC1-211ENST00000590701 MAGI1Q96QZ7 1491 aaPredicted RBP27■■□□□ 1.91
ERCC1-211ENST00000590701 GRIN2BQ13224 1484 aa27■■□□□ 1.91
ERCC1-211ENST00000590701 WDR97A6NE52 1622 aa26.97■■□□□ 1.91
ERCC1-211ENST00000590701 SYNJ2O15056 1496 aa26.95■■□□□ 1.91
ERCC1-211ENST00000590701 GAPVD1Q14C86 1478 aa26.89■■□□□ 1.9
ERCC1-211ENST00000590701 PBRM1Q86U86 1689 aa26.86■■□□□ 1.89
ERCC1-211ENST00000590701 ERCC6L2Q5T890 1561 aa26.76■■□□□ 1.87
ERCC1-211ENST00000590701 ABCA10Q8WWZ4 1543 aa26.72■■□□□ 1.87
ERCC1-211ENST00000590701 ABCA5Q8WWZ7 1642 aa26.72■■□□□ 1.87
ERCC1-211ENST00000590701 GRIN2AQ12879 1464 aa26.65■■□□□ 1.86
ERCC1-211ENST00000590701 CEP170Q5SW79 1584 aa26.61■■□□□ 1.85
ERCC1-211ENST00000590701 NUP160Q12769 1436 aa26.56■■□□□ 1.84
ERCC1-211ENST00000590701 SUPT5HO00267 1087 aaKnown RBP26.54■■□□□ 1.84
ERCC1-211ENST00000590701 WRNQ14191 1432 aaPredicted RBP eCLIP26.54■■□□□ 1.84
ERCC1-211ENST00000590701 ADAMTS12P58397 1594 aa26.54■■□□□ 1.84
ERCC1-211ENST00000590701 SHROOM2Q13796 1616 aa26.49■■□□□ 1.83
ERCC1-211ENST00000590701 FHAD1B1AJZ9 1412 aa26.48■■□□□ 1.83
ERCC1-211ENST00000590701 KIF13AQ9H1H9 1805 aa26.47■■□□□ 1.83
ERCC1-211ENST00000590701 PRG4Q92954 1404 aaPredicted RBP26.42■■□□□ 1.82
ERCC1-211ENST00000590701 JPH4Q96JJ6 628 aa26.42■■□□□ 1.82
ERCC1-211ENST00000590701 TOP2BQ02880 1626 aa26.39■■□□□ 1.82
ERCC1-211ENST00000590701 BIVM-ERCC5R4GMW8 1640 aa26.39■■□□□ 1.82
ERCC1-211ENST00000590701 FAM69CQ0P6D2 419 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms