RNA–Protein interactions for RNA: ENST00000590650.1

U2AF1L4-214, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, humanhuman

TSL 3

Gene U2AF1L4, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4-214ENST00000590650 NISCHQ9Y2I1 1504 aa59.73■■■■■ 7.15
U2AF1L4-214ENST00000590650 CCDC180Q9P1Z9 1646 aa53.13■■■■■ 6.1
U2AF1L4-214ENST00000590650 ABCC9O60706 1549 aa52.09■■■■■ 5.93
U2AF1L4-214ENST00000590650 RB1CC1Q8TDY2 1594 aa50.08■■■■■ 5.61
U2AF1L4-214ENST00000590650 DCAF8L2P0C7V8 631 aa50.06■■■■■ 5.6
U2AF1L4-214ENST00000590650 NACADO15069 1562 aa49.99■■■■■ 5.59
U2AF1L4-214ENST00000590650 ZCCHC6Q5VYS8 1495 aaKnown RBP49.74■■■■■ 5.55
U2AF1L4-214ENST00000590650 MYO15BQ96JP2 1530 aa49.65■■■■■ 5.54
U2AF1L4-214ENST00000590650 DCAF1Q9Y4B6 1507 aa49.4■■■■■ 5.5
U2AF1L4-214ENST00000590650 UNC13AQ9UPW8 1703 aa48.83■■■■■ 5.41
U2AF1L4-214ENST00000590650 PABPN1Q86U42 306 aaKnown RBP eCLIP48.68■■■■■ 5.38
U2AF1L4-214ENST00000590650 SCRIBQ14160 1630 aa48.5■■■■■ 5.35
U2AF1L4-214ENST00000590650 BICRAQ9NZM4 1560 aa48.47■■■■■ 5.35
U2AF1L4-214ENST00000590650 SHROOM4Q9ULL8 1493 aa48.04■■■■■ 5.28
U2AF1L4-214ENST00000590650 DNAJC5BQ9UF47 199 aa47.8■■■■■ 5.24
U2AF1L4-214ENST00000590650 EIF4G1Q04637 1599 aaKnown RBP47.26■■■■■ 5.16
U2AF1L4-214ENST00000590650 CC2D2AQ9P2K1 1620 aa47.08■■■■■ 5.13
U2AF1L4-214ENST00000590650 CECR2Q9BXF3 1484 aa46.82■■■■■ 5.09
U2AF1L4-214ENST00000590650 SMARCA4P51532 1647 aa46.36■■■■■ 5.01
U2AF1L4-214ENST00000590650 BAZ1AQ9NRL2 1556 aaPredicted RBP46.33■■■■■ 5.01
U2AF1L4-214ENST00000590650 ATAD2BQ9ULI0 1458 aa46.13■■■■■ 4.98
U2AF1L4-214ENST00000590650 NCAPD3P42695 1498 aa46.11■■■■■ 4.97
U2AF1L4-214ENST00000590650 SMARCA2P51531 1590 aa46.1■■■■■ 4.97
U2AF1L4-214ENST00000590650 MROH2BQ7Z745 1585 aa46.02■■■■■ 4.96
U2AF1L4-214ENST00000590650 HMGXB3Q12766 1538 aa45.89■■■■■ 4.94
U2AF1L4-214ENST00000590650 PEG3Q9GZU2 1588 aa45.88■■■■■ 4.94
U2AF1L4-214ENST00000590650 BAZ1BQ9UIG0 1483 aaKnown RBP45.8■■■■■ 4.92
U2AF1L4-214ENST00000590650 WIZO95785 1651 aa45.52■■■■■ 4.88
U2AF1L4-214ENST00000590650 RSF1Q96T23 1441 aaPredicted RBP45.48■■■■■ 4.87
U2AF1L4-214ENST00000590650 TOP2AP11388 1531 aaKnown RBP45.06■■■■■ 4.8
U2AF1L4-214ENST00000590650 NESP48681 1621 aa45.02■■■■■ 4.8
U2AF1L4-214ENST00000590650 ERCC6Q03468 1493 aa44.96■■■■■ 4.79
U2AF1L4-214ENST00000590650 LAMC3Q9Y6N6 1575 aa44.92■■■■■ 4.78
U2AF1L4-214ENST00000590650 CADPSQ9ULU8 1353 aa44.8■■■■■ 4.76
U2AF1L4-214ENST00000590650 PDS5BQ9NTI5 1447 aa44.67■■■■■ 4.74
U2AF1L4-214ENST00000590650 CCDC88BA6NC98 1476 aa44.53■■■■■ 4.72
U2AF1L4-214ENST00000590650 CFTRP13569 1480 aa44.49■■■■■ 4.71
U2AF1L4-214ENST00000590650 KIF21AQ7Z4S6 1674 aa44.47■■■■■ 4.71
U2AF1L4-214ENST00000590650 CUX2O14529 1486 aa44.46■■■■■ 4.71
U2AF1L4-214ENST00000590650 SUPT5HO00267 1087 aaKnown RBP44.38■■■■■ 4.7
U2AF1L4-214ENST00000590650 THOC2Q8NI27 1593 aaKnown RBP44.34■■■■■ 4.69
U2AF1L4-214ENST00000590650 FANCD2Q9BXW9 1451 aa44.28■■■■■ 4.68
U2AF1L4-214ENST00000590650 CEP164Q9UPV0 1460 aa44.25■■■■■ 4.67
U2AF1L4-214ENST00000590650 MRC2Q9UBG0 1479 aa44.19■■■■■ 4.66
U2AF1L4-214ENST00000590650 PRDM2Q13029 1718 aa44.12■■■■■ 4.65
U2AF1L4-214ENST00000590650 WDR62O43379 1518 aa44.02■■■■■ 4.64
U2AF1L4-214ENST00000590650 URB2Q14146 1524 aaKnown RBP43.81■■■■■ 4.6
U2AF1L4-214ENST00000590650 ABCC8Q09428 1581 aa43.58■■■■■ 4.57
U2AF1L4-214ENST00000590650 TOPBP1Q92547 1522 aa43.55■■■■■ 4.56
U2AF1L4-214ENST00000590650 DNMBPQ6XZF7 1577 aa43.5■■■■■ 4.55
U2AF1L4-214ENST00000590650 IFT140Q96RY7 1462 aa43.32■■■■■ 4.52
U2AF1L4-214ENST00000590650 CUX1P39880 1505 aa43.18■■■■■ 4.5
U2AF1L4-214ENST00000590650 POLA1P09884 1462 aaPredicted RBP43.18■■■■■ 4.5
U2AF1L4-214ENST00000590650 DNAJC5Q9H3Z4 198 aa43.15■■■■■ 4.5
U2AF1L4-214ENST00000590650 ZNF608Q9ULD9 1512 aaPredicted RBP43.09■■■■■ 4.49
U2AF1L4-214ENST00000590650 FGD5Q6ZNL6 1462 aa43.08■■■■■ 4.49
U2AF1L4-214ENST00000590650 SOGA1O94964 1423 aa43.04■■■■■ 4.48
U2AF1L4-214ENST00000590650 TARBP1Q13395 1621 aaKnown RBP43.04■■■■■ 4.48
U2AF1L4-214ENST00000590650 RAD54L2Q9Y4B4 1467 aa43■■■■■ 4.47
U2AF1L4-214ENST00000590650 WRNQ14191 1432 aaPredicted RBP eCLIP42.93■■■■■ 4.46
U2AF1L4-214ENST00000590650 EIF4G3O43432 1585 aaKnown RBP42.93■■■■■ 4.46
U2AF1L4-214ENST00000590650 AQRO60306 1485 aaKnown RBP eCLIP42.87■■■■■ 4.45
U2AF1L4-214ENST00000590650 TOP2BQ02880 1626 aa42.8■■■■■ 4.44
U2AF1L4-214ENST00000590650 TDRD9Q8NDG6 1382 aaKnown RBP42.79■■■■■ 4.44
U2AF1L4-214ENST00000590650 BIVM-ERCC5R4GMW8 1640 aa42.79■■■■■ 4.44
U2AF1L4-214ENST00000590650 SYNJ1O43426 1573 aa42.78■■■■■ 4.44
U2AF1L4-214ENST00000590650 WDR97A6NE52 1622 aa42.75■■■■■ 4.43
U2AF1L4-214ENST00000590650 ABCA10Q8WWZ4 1543 aa42.65■■■■■ 4.42
U2AF1L4-214ENST00000590650 OSCARQ8IYS5 282 aa42.64■■■■■ 4.42
U2AF1L4-214ENST00000590650 GRIN2BQ13224 1484 aa42.54■■■■■ 4.4
U2AF1L4-214ENST00000590650 GAPVD1Q14C86 1478 aa42.53■■■■■ 4.4
U2AF1L4-214ENST00000590650 SNAPC4Q5SXM2 1469 aa42.48■■■■■ 4.39
U2AF1L4-214ENST00000590650 ABCA5Q8WWZ7 1642 aa42.46■■■■■ 4.39
U2AF1L4-214ENST00000590650 FBLN2P98095 1184 aa42.45■■■■■ 4.39
U2AF1L4-214ENST00000590650 MAGI1Q96QZ7 1491 aaPredicted RBP42.43■■■■■ 4.38
U2AF1L4-214ENST00000590650 PBRM1Q86U86 1689 aa42.4■■■■■ 4.38
U2AF1L4-214ENST00000590650 CHD1O14646 1710 aa42.38■■■■■ 4.38
U2AF1L4-214ENST00000590650 CHMP7Q8WUX9 453 aaPredicted RBP42.31■■■■■ 4.36
U2AF1L4-214ENST00000590650 SYNJ2O15056 1496 aa42.26■■■■■ 4.36
U2AF1L4-214ENST00000590650 ERICH3Q5RHP9 1530 aa42.15■■■■■ 4.34
U2AF1L4-214ENST00000590650 ADAMTS12P58397 1594 aa42.08■■■■■ 4.33
U2AF1L4-214ENST00000590650 KIF27Q86VH2 1401 aa42.06■■■■■ 4.32
U2AF1L4-214ENST00000590650 FHAD1B1AJZ9 1412 aa42.04■■■■■ 4.32
U2AF1L4-214ENST00000590650 GRIN2AQ12879 1464 aa41.98■■■■■ 4.31
U2AF1L4-214ENST00000590650 TRIM41Q8WV44 630 aa41.93■■■■■ 4.3
U2AF1L4-214ENST00000590650 CLASP1Q7Z460 1538 aa41.92■■■■■ 4.3
U2AF1L4-214ENST00000590650 ARHGEF11O15085 1522 aa41.9■■■■■ 4.3
U2AF1L4-214ENST00000590650 RIMBP3CA6NJZ7 1639 aa41.89■■■■■ 4.3
U2AF1L4-214ENST00000590650 RIMBP3BA6NNM3 1639 aa41.89■■■■■ 4.3
U2AF1L4-214ENST00000590650 RIMBP3Q9UFD9 1639 aa41.89■■■■■ 4.3
U2AF1L4-214ENST00000590650 IGF1RP08069 1367 aa41.85■■■■■ 4.29
U2AF1L4-214ENST00000590650 NUP160Q12769 1436 aa41.78■■■■■ 4.28
U2AF1L4-214ENST00000590650 CUL7Q14999 1698 aa41.76■■■■■ 4.28
U2AF1L4-214ENST00000590650 CEP170Q5SW79 1584 aa41.74■■■■■ 4.27
U2AF1L4-214ENST00000590650 CARMIL1Q5VZK9 1371 aa41.63■■■■■ 4.26
U2AF1L4-214ENST00000590650 RUSC2Q8N2Y8 1516 aa41.58■■■■■ 4.25
U2AF1L4-214ENST00000590650 CYB5RLQ6IPT4 315 aa41.56■■■■■ 4.24
U2AF1L4-214ENST00000590650 ARAP1Q96P48 1450 aa41.54■■■■■ 4.24
U2AF1L4-214ENST00000590650 SHROOM2Q13796 1616 aa41.44■■■■■ 4.22
U2AF1L4-214ENST00000590650 KIAA0586Q9BVV6 1533 aa41.39■■■■■ 4.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms