RNA–Protein interactions for RNA: ENST00000590636.1

CCDC159-216, Transcript of coiled-coil domain containing 159, humanhuman

TSL 4

Gene CCDC159, Length 561 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC159-216ENST00000590636 NISCHQ9Y2I1 1504 aa35.71■■■■□ 3.31
CCDC159-216ENST00000590636 ABCC9O60706 1549 aa32.16■■■□□ 2.74
CCDC159-216ENST00000590636 CCDC180Q9P1Z9 1646 aa31.95■■■□□ 2.71
CCDC159-216ENST00000590636 RB1CC1Q8TDY2 1594 aa30.49■■■□□ 2.47
CCDC159-216ENST00000590636 DNAJC5BQ9UF47 199 aa30.31■■■□□ 2.44
CCDC159-216ENST00000590636 NACADO15069 1562 aa30.28■■■□□ 2.44
CCDC159-216ENST00000590636 DCAF8L2P0C7V8 631 aa30.26■■■□□ 2.43
CCDC159-216ENST00000590636 PABPN1Q86U42 306 aaKnown RBP eCLIP30■■■□□ 2.39
CCDC159-216ENST00000590636 MYO15BQ96JP2 1530 aa29.85■■■□□ 2.37
CCDC159-216ENST00000590636 UNC13AQ9UPW8 1703 aa29.76■■■□□ 2.35
CCDC159-216ENST00000590636 BICRAQ9NZM4 1560 aa29.66■■■□□ 2.34
CCDC159-216ENST00000590636 ZCCHC6Q5VYS8 1495 aaKnown RBP29.56■■■□□ 2.32
CCDC159-216ENST00000590636 DCAF1Q9Y4B6 1507 aa29.45■■■□□ 2.3
CCDC159-216ENST00000590636 SCRIBQ14160 1630 aa29.2■■■□□ 2.27
CCDC159-216ENST00000590636 SHROOM4Q9ULL8 1493 aa29.18■■■□□ 2.26
CCDC159-216ENST00000590636 CC2D2AQ9P2K1 1620 aa28.99■■■□□ 2.23
CCDC159-216ENST00000590636 CECR2Q9BXF3 1484 aa28.96■■■□□ 2.23
CCDC159-216ENST00000590636 EIF4G1Q04637 1599 aaKnown RBP28.92■■■□□ 2.22
CCDC159-216ENST00000590636 NCAPD3P42695 1498 aa28.02■■■□□ 2.08
CCDC159-216ENST00000590636 ATAD2BQ9ULI0 1458 aa27.93■■■□□ 2.06
CCDC159-216ENST00000590636 SMARCA4P51532 1647 aa27.83■■■□□ 2.05
CCDC159-216ENST00000590636 DNAJC5Q9H3Z4 198 aa27.82■■■□□ 2.04
CCDC159-216ENST00000590636 SMARCA2P51531 1590 aa27.79■■■□□ 2.04
CCDC159-216ENST00000590636 HMGXB3Q12766 1538 aa27.74■■■□□ 2.03
CCDC159-216ENST00000590636 ERCC6Q03468 1493 aa27.74■■■□□ 2.03
CCDC159-216ENST00000590636 CUX2O14529 1486 aa27.68■■■□□ 2.02
CCDC159-216ENST00000590636 BAZ1AQ9NRL2 1556 aaPredicted RBP27.68■■■□□ 2.02
CCDC159-216ENST00000590636 BAZ1BQ9UIG0 1483 aaKnown RBP27.63■■■□□ 2.01
CCDC159-216ENST00000590636 NESP48681 1621 aa27.62■■■□□ 2.01
CCDC159-216ENST00000590636 PEG3Q9GZU2 1588 aa27.55■■■□□ 2
CCDC159-216ENST00000590636 MROH2BQ7Z745 1585 aa27.54■■■□□ 2
CCDC159-216ENST00000590636 LAMC3Q9Y6N6 1575 aa27.32■■□□□ 1.96
CCDC159-216ENST00000590636 THOC2Q8NI27 1593 aaKnown RBP27.26■■□□□ 1.96
CCDC159-216ENST00000590636 PDS5BQ9NTI5 1447 aa27.22■■□□□ 1.95
CCDC159-216ENST00000590636 CADPSQ9ULU8 1353 aa27.18■■□□□ 1.94
CCDC159-216ENST00000590636 WIZO95785 1651 aa27.16■■□□□ 1.94
CCDC159-216ENST00000590636 KIF21AQ7Z4S6 1674 aa27.16■■□□□ 1.94
CCDC159-216ENST00000590636 MRC2Q9UBG0 1479 aa26.99■■□□□ 1.91
CCDC159-216ENST00000590636 RSF1Q96T23 1441 aaPredicted RBP26.98■■□□□ 1.91
CCDC159-216ENST00000590636 WDR62O43379 1518 aa26.9■■□□□ 1.9
CCDC159-216ENST00000590636 CEP164Q9UPV0 1460 aa26.86■■□□□ 1.89
CCDC159-216ENST00000590636 FANCD2Q9BXW9 1451 aa26.85■■□□□ 1.89
CCDC159-216ENST00000590636 CFTRP13569 1480 aa26.84■■□□□ 1.89
CCDC159-216ENST00000590636 TOP2AP11388 1531 aaKnown RBP26.8■■□□□ 1.88
CCDC159-216ENST00000590636 URB2Q14146 1524 aaKnown RBP26.65■■□□□ 1.86
CCDC159-216ENST00000590636 TRIM41Q8WV44 630 aa26.59■■□□□ 1.85
CCDC159-216ENST00000590636 CCDC88BA6NC98 1476 aa26.56■■□□□ 1.84
CCDC159-216ENST00000590636 OSCARQ8IYS5 282 aa26.48■■□□□ 1.83
CCDC159-216ENST00000590636 PRDM2Q13029 1718 aa26.4■■□□□ 1.82
CCDC159-216ENST00000590636 ZNF608Q9ULD9 1512 aaPredicted RBP26.34■■□□□ 1.81
CCDC159-216ENST00000590636 IFT140Q96RY7 1462 aa26.34■■□□□ 1.81
CCDC159-216ENST00000590636 TOPBP1Q92547 1522 aa26.33■■□□□ 1.81
CCDC159-216ENST00000590636 ABCC8Q09428 1581 aa26.23■■□□□ 1.79
CCDC159-216ENST00000590636 DNMBPQ6XZF7 1577 aa26.19■■□□□ 1.78
CCDC159-216ENST00000590636 AQRO60306 1485 aaKnown RBP eCLIP26.11■■□□□ 1.77
CCDC159-216ENST00000590636 EIF4G3O43432 1585 aaKnown RBP26.11■■□□□ 1.77
CCDC159-216ENST00000590636 TARBP1Q13395 1621 aaKnown RBP26.07■■□□□ 1.76
CCDC159-216ENST00000590636 RIMBP3CA6NJZ7 1639 aa26.06■■□□□ 1.76
CCDC159-216ENST00000590636 RIMBP3BA6NNM3 1639 aa26.06■■□□□ 1.76
CCDC159-216ENST00000590636 RIMBP3Q9UFD9 1639 aa26.06■■□□□ 1.76
CCDC159-216ENST00000590636 POLA1P09884 1462 aaPredicted RBP26.06■■□□□ 1.76
CCDC159-216ENST00000590636 ARHGEF11O15085 1522 aa26.01■■□□□ 1.75
CCDC159-216ENST00000590636 RAD54L2Q9Y4B4 1467 aa26■■□□□ 1.75
CCDC159-216ENST00000590636 FBLN2P98095 1184 aa25.97■■□□□ 1.75
CCDC159-216ENST00000590636 SOGA1O94964 1423 aa25.97■■□□□ 1.75
CCDC159-216ENST00000590636 TDRD9Q8NDG6 1382 aaKnown RBP25.96■■□□□ 1.75
CCDC159-216ENST00000590636 CYB5RLQ6IPT4 315 aa25.9■■□□□ 1.74
CCDC159-216ENST00000590636 CHD1O14646 1710 aa25.9■■□□□ 1.74
CCDC159-216ENST00000590636 FGD5Q6ZNL6 1462 aa25.89■■□□□ 1.73
CCDC159-216ENST00000590636 CUX1P39880 1505 aa25.87■■□□□ 1.73
CCDC159-216ENST00000590636 SNAPC4Q5SXM2 1469 aa25.8■■□□□ 1.72
CCDC159-216ENST00000590636 SUPT5HO00267 1087 aaKnown RBP25.79■■□□□ 1.72
CCDC159-216ENST00000590636 ARAP1Q96P48 1450 aa25.77■■□□□ 1.72
CCDC159-216ENST00000590636 CHMP7Q8WUX9 453 aaPredicted RBP25.75■■□□□ 1.71
CCDC159-216ENST00000590636 WDR97A6NE52 1622 aa25.74■■□□□ 1.71
CCDC159-216ENST00000590636 GRIN2BQ13224 1484 aa25.72■■□□□ 1.71
CCDC159-216ENST00000590636 MAGI1Q96QZ7 1491 aaPredicted RBP25.7■■□□□ 1.7
CCDC159-216ENST00000590636 CLASP1Q7Z460 1538 aa25.65■■□□□ 1.7
CCDC159-216ENST00000590636 SYNJ2O15056 1496 aa25.64■■□□□ 1.69
CCDC159-216ENST00000590636 GAPVD1Q14C86 1478 aa25.63■■□□□ 1.69
CCDC159-216ENST00000590636 SYNJ1O43426 1573 aa25.61■■□□□ 1.69
CCDC159-216ENST00000590636 TRHP20396 242 aaPredicted RBP25.6■■□□□ 1.69
CCDC159-216ENST00000590636 ABCA10Q8WWZ4 1543 aa25.58■■□□□ 1.69
CCDC159-216ENST00000590636 PBRM1Q86U86 1689 aa25.52■■□□□ 1.68
CCDC159-216ENST00000590636 ABCA5Q8WWZ7 1642 aa25.51■■□□□ 1.67
CCDC159-216ENST00000590636 WRNQ14191 1432 aaPredicted RBP eCLIP25.49■■□□□ 1.67
CCDC159-216ENST00000590636 TOP2BQ02880 1626 aa25.39■■□□□ 1.66
CCDC159-216ENST00000590636 GRIN2AQ12879 1464 aa25.38■■□□□ 1.65
CCDC159-216ENST00000590636 BIVM-ERCC5R4GMW8 1640 aa25.37■■□□□ 1.65
CCDC159-216ENST00000590636 ADAMTS12P58397 1594 aa25.33■■□□□ 1.65
CCDC159-216ENST00000590636 NUP160Q12769 1436 aa25.31■■□□□ 1.64
CCDC159-216ENST00000590636 FHAD1B1AJZ9 1412 aa25.3■■□□□ 1.64
CCDC159-216ENST00000590636 ERCC6L2Q5T890 1561 aa25.3■■□□□ 1.64
CCDC159-216ENST00000590636 CEP170Q5SW79 1584 aa25.29■■□□□ 1.64
CCDC159-216ENST00000590636 ERICH3Q5RHP9 1530 aa25.23■■□□□ 1.63
CCDC159-216ENST00000590636 SHROOM2Q13796 1616 aa25.15■■□□□ 1.62
CCDC159-216ENST00000590636 JPH4Q96JJ6 628 aa25.1■■□□□ 1.61
CCDC159-216ENST00000590636 PRG4Q92954 1404 aaPredicted RBP25.1■■□□□ 1.61
CCDC159-216ENST00000590636 IGF1RP08069 1367 aa24.99■■□□□ 1.59
CCDC159-216ENST00000590636 RUSC2Q8N2Y8 1516 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms