RNA–Protein interactions for RNA: ENST00000590635.5

CTDP1-206, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 5

Gene CTDP1, Length 489 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-206ENST00000590635 NISCHQ9Y2I1 1504 aa29.54■■■□□ 2.32
CTDP1-206ENST00000590635 CCDC180Q9P1Z9 1646 aa26.28■■□□□ 1.8
CTDP1-206ENST00000590635 ABCC9O60706 1549 aa25.83■■□□□ 1.73
CTDP1-206ENST00000590635 RB1CC1Q8TDY2 1594 aa24.85■■□□□ 1.57
CTDP1-206ENST00000590635 DCAF8L2P0C7V8 631 aa24.83■■□□□ 1.57
CTDP1-206ENST00000590635 NACADO15069 1562 aa24.81■■□□□ 1.56
CTDP1-206ENST00000590635 MYO15BQ96JP2 1530 aa24.66■■□□□ 1.54
CTDP1-206ENST00000590635 ZCCHC6Q5VYS8 1495 aaKnown RBP24.55■■□□□ 1.52
CTDP1-206ENST00000590635 DCAF1Q9Y4B6 1507 aa24.48■■□□□ 1.51
CTDP1-206ENST00000590635 PABPN1Q86U42 306 aaKnown RBP eCLIP24.17■■□□□ 1.46
CTDP1-206ENST00000590635 UNC13AQ9UPW8 1703 aa24.1■■□□□ 1.45
CTDP1-206ENST00000590635 BICRAQ9NZM4 1560 aa24■■□□□ 1.43
CTDP1-206ENST00000590635 SCRIBQ14160 1630 aa23.92■■□□□ 1.42
CTDP1-206ENST00000590635 SHROOM4Q9ULL8 1493 aa23.9■■□□□ 1.42
CTDP1-206ENST00000590635 DNAJC5BQ9UF47 199 aa23.85■■□□□ 1.41
CTDP1-206ENST00000590635 EIF4G1Q04637 1599 aaKnown RBP23.44■■□□□ 1.34
CTDP1-206ENST00000590635 CC2D2AQ9P2K1 1620 aa23.35■■□□□ 1.33
CTDP1-206ENST00000590635 CECR2Q9BXF3 1484 aa23.28■■□□□ 1.32
CTDP1-206ENST00000590635 BAZ1AQ9NRL2 1556 aaPredicted RBP22.93■■□□□ 1.26
CTDP1-206ENST00000590635 NCAPD3P42695 1498 aa22.92■■□□□ 1.26
CTDP1-206ENST00000590635 SMARCA4P51532 1647 aa22.9■■□□□ 1.26
CTDP1-206ENST00000590635 ATAD2BQ9ULI0 1458 aa22.86■■□□□ 1.25
CTDP1-206ENST00000590635 SMARCA2P51531 1590 aa22.85■■□□□ 1.25
CTDP1-206ENST00000590635 HMGXB3Q12766 1538 aa22.74■■□□□ 1.23
CTDP1-206ENST00000590635 MROH2BQ7Z745 1585 aa22.72■■□□□ 1.23
CTDP1-206ENST00000590635 PEG3Q9GZU2 1588 aa22.72■■□□□ 1.23
CTDP1-206ENST00000590635 BAZ1BQ9UIG0 1483 aaKnown RBP22.67■■□□□ 1.22
CTDP1-206ENST00000590635 RSF1Q96T23 1441 aaPredicted RBP22.47■■□□□ 1.19
CTDP1-206ENST00000590635 WIZO95785 1651 aa22.42■■□□□ 1.18
CTDP1-206ENST00000590635 ERCC6Q03468 1493 aa22.34■■□□□ 1.17
CTDP1-206ENST00000590635 LAMC3Q9Y6N6 1575 aa22.29■■□□□ 1.16
CTDP1-206ENST00000590635 NESP48681 1621 aa22.28■■□□□ 1.16
CTDP1-206ENST00000590635 CADPSQ9ULU8 1353 aa22.26■■□□□ 1.15
CTDP1-206ENST00000590635 TOP2AP11388 1531 aaKnown RBP22.24■■□□□ 1.15
CTDP1-206ENST00000590635 PDS5BQ9NTI5 1447 aa22.23■■□□□ 1.15
CTDP1-206ENST00000590635 CUX2O14529 1486 aa22.16■■□□□ 1.14
CTDP1-206ENST00000590635 CFTRP13569 1480 aa22.06■■□□□ 1.12
CTDP1-206ENST00000590635 CCDC88BA6NC98 1476 aa22■■□□□ 1.11
CTDP1-206ENST00000590635 KIF21AQ7Z4S6 1674 aa21.97■■□□□ 1.11
CTDP1-206ENST00000590635 THOC2Q8NI27 1593 aaKnown RBP21.95■■□□□ 1.11
CTDP1-206ENST00000590635 FANCD2Q9BXW9 1451 aa21.95■■□□□ 1.1
CTDP1-206ENST00000590635 CEP164Q9UPV0 1460 aa21.94■■□□□ 1.1
CTDP1-206ENST00000590635 MRC2Q9UBG0 1479 aa21.92■■□□□ 1.1
CTDP1-206ENST00000590635 SUPT5HO00267 1087 aaKnown RBP21.84■■□□□ 1.09
CTDP1-206ENST00000590635 WDR62O43379 1518 aa21.83■■□□□ 1.09
CTDP1-206ENST00000590635 PRDM2Q13029 1718 aa21.75■■□□□ 1.07
CTDP1-206ENST00000590635 URB2Q14146 1524 aaKnown RBP21.69■■□□□ 1.06
CTDP1-206ENST00000590635 DNAJC5Q9H3Z4 198 aa21.68■■□□□ 1.06
CTDP1-206ENST00000590635 ABCC8Q09428 1581 aa21.67■■□□□ 1.06
CTDP1-206ENST00000590635 TOPBP1Q92547 1522 aa21.56■■□□□ 1.04
CTDP1-206ENST00000590635 DNMBPQ6XZF7 1577 aa21.52■■□□□ 1.04
CTDP1-206ENST00000590635 IFT140Q96RY7 1462 aa21.51■■□□□ 1.03
CTDP1-206ENST00000590635 POLA1P09884 1462 aaPredicted RBP21.37■■□□□ 1.01
CTDP1-206ENST00000590635 SOGA1O94964 1423 aa21.35■■□□□ 1.01
CTDP1-206ENST00000590635 ZNF608Q9ULD9 1512 aaPredicted RBP21.34■■□□□ 1.01
CTDP1-206ENST00000590635 CUX1P39880 1505 aa21.31■■□□□ 1
CTDP1-206ENST00000590635 OSCARQ8IYS5 282 aa21.31■■□□□ 1
CTDP1-206ENST00000590635 FGD5Q6ZNL6 1462 aa21.29■■□□□ 1
CTDP1-206ENST00000590635 TARBP1Q13395 1621 aaKnown RBP21.29■■□□□ 1
CTDP1-206ENST00000590635 RAD54L2Q9Y4B4 1467 aa21.26■□□□□ 0.99
CTDP1-206ENST00000590635 AQRO60306 1485 aaKnown RBP eCLIP21.25■□□□□ 0.99
CTDP1-206ENST00000590635 EIF4G3O43432 1585 aaKnown RBP21.22■□□□□ 0.99
CTDP1-206ENST00000590635 WRNQ14191 1432 aaPredicted RBP eCLIP21.21■□□□□ 0.992e-8■■■■■ 75.2
CTDP1-206ENST00000590635 TDRD9Q8NDG6 1382 aaKnown RBP21.21■□□□□ 0.99
CTDP1-206ENST00000590635 WDR97A6NE52 1622 aa21.2■□□□□ 0.98
CTDP1-206ENST00000590635 TOP2BQ02880 1626 aa21.12■□□□□ 0.97
CTDP1-206ENST00000590635 ABCA10Q8WWZ4 1543 aa21.11■□□□□ 0.97
CTDP1-206ENST00000590635 GRIN2BQ13224 1484 aa21.1■□□□□ 0.97
CTDP1-206ENST00000590635 FBLN2P98095 1184 aa21.1■□□□□ 0.97
CTDP1-206ENST00000590635 BIVM-ERCC5R4GMW8 1640 aa21.08■□□□□ 0.97
CTDP1-206ENST00000590635 GAPVD1Q14C86 1478 aa21.07■□□□□ 0.96
CTDP1-206ENST00000590635 MAGI1Q96QZ7 1491 aaPredicted RBP21.06■□□□□ 0.96
CTDP1-206ENST00000590635 CHMP7Q8WUX9 453 aaPredicted RBP21.05■□□□□ 0.96
CTDP1-206ENST00000590635 SYNJ1O43426 1573 aa21.05■□□□□ 0.96
CTDP1-206ENST00000590635 SNAPC4Q5SXM2 1469 aa21.02■□□□□ 0.96
CTDP1-206ENST00000590635 ABCA5Q8WWZ7 1642 aa20.96■□□□□ 0.95
CTDP1-206ENST00000590635 SYNJ2O15056 1496 aa20.96■□□□□ 0.95
CTDP1-206ENST00000590635 CHD1O14646 1710 aa20.93■□□□□ 0.94
CTDP1-206ENST00000590635 PBRM1Q86U86 1689 aa20.9■□□□□ 0.94
CTDP1-206ENST00000590635 TRIM41Q8WV44 630 aa20.87■□□□□ 0.93
CTDP1-206ENST00000590635 ERICH3Q5RHP9 1530 aa20.87■□□□□ 0.93
CTDP1-206ENST00000590635 FHAD1B1AJZ9 1412 aa20.85■□□□□ 0.93
CTDP1-206ENST00000590635 ARHGEF11O15085 1522 aa20.83■□□□□ 0.92
CTDP1-206ENST00000590635 KIF27Q86VH2 1401 aa20.82■□□□□ 0.92
CTDP1-206ENST00000590635 RIMBP3CA6NJZ7 1639 aa20.79■□□□□ 0.92
CTDP1-206ENST00000590635 RIMBP3BA6NNM3 1639 aa20.79■□□□□ 0.92
CTDP1-206ENST00000590635 RIMBP3Q9UFD9 1639 aa20.79■□□□□ 0.92
CTDP1-206ENST00000590635 GRIN2AQ12879 1464 aa20.79■□□□□ 0.92
CTDP1-206ENST00000590635 CLASP1Q7Z460 1538 aa20.78■□□□□ 0.92
CTDP1-206ENST00000590635 ADAMTS12P58397 1594 aa20.77■□□□□ 0.92
CTDP1-206ENST00000590635 IGF1RP08069 1367 aa20.73■□□□□ 0.91
CTDP1-206ENST00000590635 CYB5RLQ6IPT4 315 aa20.73■□□□□ 0.91
CTDP1-206ENST00000590635 NUP160Q12769 1436 aa20.71■□□□□ 0.91
CTDP1-206ENST00000590635 CEP170Q5SW79 1584 aa20.63■□□□□ 0.89
CTDP1-206ENST00000590635 ARAP1Q96P48 1450 aa20.62■□□□□ 0.89
CTDP1-206ENST00000590635 CARMIL1Q5VZK9 1371 aa20.61■□□□□ 0.89
CTDP1-206ENST00000590635 CUL7Q14999 1698 aa20.61■□□□□ 0.89
CTDP1-206ENST00000590635 JPH4Q96JJ6 628 aa20.59■□□□□ 0.89
CTDP1-206ENST00000590635 KIAA0586Q9BVV6 1533 aa20.52■□□□□ 0.87
CTDP1-206ENST00000590635 SHROOM2Q13796 1616 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms