RNA–Protein interactions for RNA: ENST00000590599.1

CTDP1-205, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 2

Gene CTDP1, Length 1,762 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-205ENST00000590599 NISCHQ9Y2I1 1504 aa41.39■■■■■ 4.22
CTDP1-205ENST00000590599 CCDC180Q9P1Z9 1646 aa36.39■■■■□ 3.42
CTDP1-205ENST00000590599 ABCC9O60706 1549 aa35.99■■■■□ 3.35
CTDP1-205ENST00000590599 ZCCHC6Q5VYS8 1495 aaKnown RBP34.75■■■■□ 3.15
CTDP1-205ENST00000590599 DCAF8L2P0C7V8 631 aa34.39■■■■□ 3.1
CTDP1-205ENST00000590599 RB1CC1Q8TDY2 1594 aa34.35■■■■□ 3.09
CTDP1-205ENST00000590599 DCAF1Q9Y4B6 1507 aa34.24■■■■□ 3.07
CTDP1-205ENST00000590599 NACADO15069 1562 aa34.23■■■■□ 3.07
CTDP1-205ENST00000590599 MYO15BQ96JP2 1530 aa33.9■■■■□ 3.02
CTDP1-205ENST00000590599 UNC13AQ9UPW8 1703 aa33.83■■■■□ 3.01
CTDP1-205ENST00000590599 PABPN1Q86U42 306 aaKnown RBP eCLIP33.63■■■□□ 2.97
CTDP1-205ENST00000590599 SHROOM4Q9ULL8 1493 aa33.61■■■□□ 2.97
CTDP1-205ENST00000590599 BICRAQ9NZM4 1560 aa33.47■■■□□ 2.95
CTDP1-205ENST00000590599 SCRIBQ14160 1630 aa33.38■■■□□ 2.93
CTDP1-205ENST00000590599 DNAJC5BQ9UF47 199 aa33.32■■■□□ 2.92
CTDP1-205ENST00000590599 EIF4G1Q04637 1599 aaKnown RBP32.54■■■□□ 2.8
CTDP1-205ENST00000590599 CC2D2AQ9P2K1 1620 aa32.51■■■□□ 2.8
CTDP1-205ENST00000590599 CECR2Q9BXF3 1484 aa32.27■■■□□ 2.76
CTDP1-205ENST00000590599 SUPT5HO00267 1087 aaKnown RBP32.24■■■□□ 2.75
CTDP1-205ENST00000590599 RSF1Q96T23 1441 aaPredicted RBP32.01■■■□□ 2.72
CTDP1-205ENST00000590599 BAZ1AQ9NRL2 1556 aaPredicted RBP32.01■■■□□ 2.71
CTDP1-205ENST00000590599 MROH2BQ7Z745 1585 aa31.95■■■□□ 2.71
CTDP1-205ENST00000590599 SMARCA4P51532 1647 aa31.88■■■□□ 2.69
CTDP1-205ENST00000590599 WIZO95785 1651 aa31.71■■■□□ 2.67
CTDP1-205ENST00000590599 ATAD2BQ9ULI0 1458 aa31.65■■■□□ 2.66
CTDP1-205ENST00000590599 NCAPD3P42695 1498 aa31.59■■■□□ 2.65
CTDP1-205ENST00000590599 SMARCA2P51531 1590 aa31.53■■■□□ 2.64
CTDP1-205ENST00000590599 PEG3Q9GZU2 1588 aa31.49■■■□□ 2.63
CTDP1-205ENST00000590599 HMGXB3Q12766 1538 aa31.42■■■□□ 2.62
CTDP1-205ENST00000590599 TOP2AP11388 1531 aaKnown RBP31.4■■■□□ 2.62
CTDP1-205ENST00000590599 BAZ1BQ9UIG0 1483 aaKnown RBP31.37■■■□□ 2.61
CTDP1-205ENST00000590599 NESP48681 1621 aa31.13■■■□□ 2.57
CTDP1-205ENST00000590599 CCDC88BA6NC98 1476 aa31.03■■■□□ 2.56
CTDP1-205ENST00000590599 ERCC6Q03468 1493 aa30.93■■■□□ 2.54
CTDP1-205ENST00000590599 LAMC3Q9Y6N6 1575 aa30.81■■■□□ 2.52
CTDP1-205ENST00000590599 KIF21AQ7Z4S6 1674 aa30.76■■■□□ 2.51
CTDP1-205ENST00000590599 CHIC1Q5VXU3 224 aa30.74■■■□□ 2.51
CTDP1-205ENST00000590599 CADPSQ9ULU8 1353 aa30.69■■■□□ 2.5
CTDP1-205ENST00000590599 THOC2Q8NI27 1593 aaKnown RBP30.62■■■□□ 2.49
CTDP1-205ENST00000590599 CUX2O14529 1486 aa30.57■■■□□ 2.48
CTDP1-205ENST00000590599 PDS5BQ9NTI5 1447 aa30.57■■■□□ 2.48
CTDP1-205ENST00000590599 CFTRP13569 1480 aa30.47■■■□□ 2.47
CTDP1-205ENST00000590599 FANCD2Q9BXW9 1451 aa30.39■■■□□ 2.46
CTDP1-205ENST00000590599 TRIM41Q8WV44 630 aa30.35■■■□□ 2.45
CTDP1-205ENST00000590599 CEP164Q9UPV0 1460 aa30.34■■■□□ 2.45
CTDP1-205ENST00000590599 ABCC8Q09428 1581 aa30.34■■■□□ 2.45
CTDP1-205ENST00000590599 MRC2Q9UBG0 1479 aa30.33■■■□□ 2.45
CTDP1-205ENST00000590599 PRDM2Q13029 1718 aa30.32■■■□□ 2.44
CTDP1-205ENST00000590599 WDR62O43379 1518 aa30.26■■■□□ 2.43
CTDP1-205ENST00000590599 WRNQ14191 1432 aaPredicted RBP eCLIP30.17■■■□□ 2.42
CTDP1-205ENST00000590599 URB2Q14146 1524 aaKnown RBP30.16■■■□□ 2.42
CTDP1-205ENST00000590599 SYNJ1O43426 1573 aa30.06■■■□□ 2.4
CTDP1-205ENST00000590599 DNAJC5Q9H3Z4 198 aa29.98■■■□□ 2.39
CTDP1-205ENST00000590599 TOP2BQ02880 1626 aa29.97■■■□□ 2.39
CTDP1-205ENST00000590599 BIVM-ERCC5R4GMW8 1640 aa29.95■■■□□ 2.38
CTDP1-205ENST00000590599 CUX1P39880 1505 aa29.91■■■□□ 2.38
CTDP1-205ENST00000590599 TOPBP1Q92547 1522 aa29.9■■■□□ 2.38
CTDP1-205ENST00000590599 DNMBPQ6XZF7 1577 aa29.81■■■□□ 2.36
CTDP1-205ENST00000590599 FAM9AQ8IZU1 332 aaPredicted RBP29.77■■■□□ 2.36
CTDP1-205ENST00000590599 ZNF608Q9ULD9 1512 aaPredicted RBP29.73■■■□□ 2.35
CTDP1-205ENST00000590599 SOGA1O94964 1423 aa29.7■■■□□ 2.34
CTDP1-205ENST00000590599 IFT140Q96RY7 1462 aa29.66■■■□□ 2.34
CTDP1-205ENST00000590599 EEA1Q15075 1411 aa29.66■■■□□ 2.34
CTDP1-205ENST00000590599 POLA1P09884 1462 aaPredicted RBP29.64■■■□□ 2.33
CTDP1-205ENST00000590599 TARBP1Q13395 1621 aaKnown RBP29.62■■■□□ 2.33
CTDP1-205ENST00000590599 FGD5Q6ZNL6 1462 aa29.62■■■□□ 2.33
CTDP1-205ENST00000590599 RAD54L2Q9Y4B4 1467 aa29.59■■■□□ 2.33
CTDP1-205ENST00000590599 RUSC2Q8N2Y8 1516 aa29.58■■■□□ 2.33
CTDP1-205ENST00000590599 EIF4G3O43432 1585 aaKnown RBP29.56■■■□□ 2.32
CTDP1-205ENST00000590599 LOC105371045A0A1W2PR82 267 aa29.54■■■□□ 2.32
CTDP1-205ENST00000590599 AQRO60306 1485 aaKnown RBP eCLIP29.52■■■□□ 2.32
CTDP1-205ENST00000590599 CSRNP3Q8WYN3 585 aa29.46■■■□□ 2.31
CTDP1-205ENST00000590599 KIF27Q86VH2 1401 aa29.44■■■□□ 2.3
CTDP1-205ENST00000590599 TDRD9Q8NDG6 1382 aaKnown RBP29.42■■■□□ 2.3
CTDP1-205ENST00000590599 ABCA10Q8WWZ4 1543 aa29.35■■■□□ 2.29
CTDP1-205ENST00000590599 WDR97A6NE52 1622 aa29.35■■■□□ 2.29
CTDP1-205ENST00000590599 EHMT2Q96KQ7 1210 aa29.34■■■□□ 2.29
CTDP1-205ENST00000590599 OSCARQ8IYS5 282 aa29.32■■■□□ 2.28
CTDP1-205ENST00000590599 CHD1O14646 1710 aa29.31■■■□□ 2.28
CTDP1-205ENST00000590599 KIF21BO75037 1637 aa29.3■■■□□ 2.28
CTDP1-205ENST00000590599 GOLGA3Q08378 1498 aa29.25■■■□□ 2.27
CTDP1-205ENST00000590599 FBLN2P98095 1184 aa29.2■■■□□ 2.26
CTDP1-205ENST00000590599 SNAPC4Q5SXM2 1469 aa29.2■■■□□ 2.26
CTDP1-205ENST00000590599 PBRM1Q86U86 1689 aa29.19■■■□□ 2.26
CTDP1-205ENST00000590599 PRXQ9BXM0 1461 aa29.16■■■□□ 2.26
CTDP1-205ENST00000590599 ABCA5Q8WWZ7 1642 aa29.15■■■□□ 2.26
CTDP1-205ENST00000590599 IGF1RP08069 1367 aa29.13■■■□□ 2.25
CTDP1-205ENST00000590599 GAPVD1Q14C86 1478 aa29.13■■■□□ 2.25
CTDP1-205ENST00000590599 ERICH3Q5RHP9 1530 aa29.13■■■□□ 2.25
CTDP1-205ENST00000590599 RAPGEF2Q9Y4G8 1499 aa29.12■■■□□ 2.25
CTDP1-205ENST00000590599 GRIN2BQ13224 1484 aa29.11■■■□□ 2.25
CTDP1-205ENST00000590599 UBTFP17480 764 aaKnown RBP29.09■■■□□ 2.25
CTDP1-205ENST00000590599 TNIKQ9UKE5 1360 aa29.08■■■□□ 2.25
CTDP1-205ENST00000590599 MAGI1Q96QZ7 1491 aaPredicted RBP29.03■■■□□ 2.24
CTDP1-205ENST00000590599 CUL7Q14999 1698 aa29.03■■■□□ 2.24
CTDP1-205ENST00000590599 RIMBP3CA6NJZ7 1639 aa29.01■■■□□ 2.24
CTDP1-205ENST00000590599 RIMBP3BA6NNM3 1639 aa29.01■■■□□ 2.24
CTDP1-205ENST00000590599 CARMIL1Q5VZK9 1371 aa29.01■■■□□ 2.24
CTDP1-205ENST00000590599 RIMBP3Q9UFD9 1639 aa29.01■■■□□ 2.24
CTDP1-205ENST00000590599 CHMP7Q8WUX9 453 aaPredicted RBP28.99■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms