RNA–Protein interactions for RNA: ENST00000590581.1

TREML1-204, Transcript of triggering receptor expressed on myeloid cells like 1, humanhuman

TSL 2

Gene TREML1, Length 596 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREML1-204ENST00000590581 NISCHQ9Y2I1 1504 aa39.57■■■■□ 3.93
TREML1-204ENST00000590581 CCDC180Q9P1Z9 1646 aa35.28■■■■□ 3.24
TREML1-204ENST00000590581 ABCC9O60706 1549 aa34.82■■■■□ 3.16
TREML1-204ENST00000590581 RB1CC1Q8TDY2 1594 aa33.31■■■□□ 2.92
TREML1-204ENST00000590581 DCAF8L2P0C7V8 631 aa33.2■■■□□ 2.91
TREML1-204ENST00000590581 NACADO15069 1562 aa33.18■■■□□ 2.9
TREML1-204ENST00000590581 ZCCHC6Q5VYS8 1495 aaKnown RBP32.92■■■□□ 2.86
TREML1-204ENST00000590581 MYO15BQ96JP2 1530 aa32.84■■■□□ 2.85
TREML1-204ENST00000590581 UNC13AQ9UPW8 1703 aa32.72■■■□□ 2.83
TREML1-204ENST00000590581 DCAF1Q9Y4B6 1507 aa32.65■■■□□ 2.82
TREML1-204ENST00000590581 PABPN1Q86U42 306 aaKnown RBP eCLIP32.5■■■□□ 2.79
TREML1-204ENST00000590581 BICRAQ9NZM4 1560 aa32.39■■■□□ 2.78
TREML1-204ENST00000590581 SCRIBQ14160 1630 aa32.27■■■□□ 2.76
TREML1-204ENST00000590581 DNAJC5BQ9UF47 199 aa32.2■■■□□ 2.75
TREML1-204ENST00000590581 SHROOM4Q9ULL8 1493 aa31.84■■■□□ 2.69
TREML1-204ENST00000590581 EIF4G1Q04637 1599 aaKnown RBP31.51■■■□□ 2.64
TREML1-204ENST00000590581 CC2D2AQ9P2K1 1620 aa31.48■■■□□ 2.63
TREML1-204ENST00000590581 CECR2Q9BXF3 1484 aa31.26■■■□□ 2.59
TREML1-204ENST00000590581 SMARCA4P51532 1647 aa30.8■■■□□ 2.52
TREML1-204ENST00000590581 BAZ1AQ9NRL2 1556 aaPredicted RBP30.66■■■□□ 2.5
TREML1-204ENST00000590581 ATAD2BQ9ULI0 1458 aa30.64■■■□□ 2.5
TREML1-204ENST00000590581 NCAPD3P42695 1498 aa30.61■■■□□ 2.49
TREML1-204ENST00000590581 SMARCA2P51531 1590 aa30.56■■■□□ 2.48
TREML1-204ENST00000590581 MROH2BQ7Z745 1585 aa30.55■■■□□ 2.48
TREML1-204ENST00000590581 HMGXB3Q12766 1538 aa30.47■■■□□ 2.47
TREML1-204ENST00000590581 PEG3Q9GZU2 1588 aa30.43■■■□□ 2.46
TREML1-204ENST00000590581 BAZ1BQ9UIG0 1483 aaKnown RBP30.38■■■□□ 2.45
TREML1-204ENST00000590581 WIZO95785 1651 aa30.26■■■□□ 2.43
TREML1-204ENST00000590581 NESP48681 1621 aa30.09■■■□□ 2.41
TREML1-204ENST00000590581 RSF1Q96T23 1441 aaPredicted RBP30.06■■■□□ 2.4
TREML1-204ENST00000590581 ERCC6Q03468 1493 aa29.98■■■□□ 2.39
TREML1-204ENST00000590581 LAMC3Q9Y6N6 1575 aa29.87■■■□□ 2.37
TREML1-204ENST00000590581 TOP2AP11388 1531 aaKnown RBP29.83■■■□□ 2.37
TREML1-204ENST00000590581 KIF21AQ7Z4S6 1674 aa29.76■■■□□ 2.36
TREML1-204ENST00000590581 CADPSQ9ULU8 1353 aa29.72■■■□□ 2.35
TREML1-204ENST00000590581 CUX2O14529 1486 aa29.68■■■□□ 2.34
TREML1-204ENST00000590581 THOC2Q8NI27 1593 aaKnown RBP29.66■■■□□ 2.34
TREML1-204ENST00000590581 PDS5BQ9NTI5 1447 aa29.63■■■□□ 2.33
TREML1-204ENST00000590581 CFTRP13569 1480 aa29.5■■■□□ 2.31
TREML1-204ENST00000590581 CCDC88BA6NC98 1476 aa29.49■■■□□ 2.31
TREML1-204ENST00000590581 FANCD2Q9BXW9 1451 aa29.42■■■□□ 2.3
TREML1-204ENST00000590581 MRC2Q9UBG0 1479 aa29.41■■■□□ 2.3
TREML1-204ENST00000590581 CEP164Q9UPV0 1460 aa29.4■■■□□ 2.3
TREML1-204ENST00000590581 PRDM2Q13029 1718 aa29.37■■■□□ 2.29
TREML1-204ENST00000590581 WDR62O43379 1518 aa29.33■■■□□ 2.29
TREML1-204ENST00000590581 URB2Q14146 1524 aaKnown RBP29.19■■■□□ 2.26
TREML1-204ENST00000590581 SUPT5HO00267 1087 aaKnown RBP29.18■■■□□ 2.26
TREML1-204ENST00000590581 DNAJC5Q9H3Z4 198 aa29.07■■■□□ 2.24
TREML1-204ENST00000590581 TOPBP1Q92547 1522 aa28.94■■■□□ 2.22
TREML1-204ENST00000590581 DNMBPQ6XZF7 1577 aa28.88■■■□□ 2.21
TREML1-204ENST00000590581 ABCC8Q09428 1581 aa28.81■■■□□ 2.2
TREML1-204ENST00000590581 IFT140Q96RY7 1462 aa28.76■■■□□ 2.19
TREML1-204ENST00000590581 ZNF608Q9ULD9 1512 aaPredicted RBP28.75■■■□□ 2.19
TREML1-204ENST00000590581 POLA1P09884 1462 aaPredicted RBP28.68■■■□□ 2.18
TREML1-204ENST00000590581 TARBP1Q13395 1621 aaKnown RBP28.67■■■□□ 2.18
TREML1-204ENST00000590581 CUX1P39880 1505 aa28.67■■■□□ 2.18
TREML1-204ENST00000590581 EIF4G3O43432 1585 aaKnown RBP28.62■■■□□ 2.17
TREML1-204ENST00000590581 RAD54L2Q9Y4B4 1467 aa28.6■■■□□ 2.17
TREML1-204ENST00000590581 FGD5Q6ZNL6 1462 aa28.59■■■□□ 2.17
TREML1-204ENST00000590581 AQRO60306 1485 aaKnown RBP eCLIP28.54■■■□□ 2.16
TREML1-204ENST00000590581 SOGA1O94964 1423 aa28.52■■■□□ 2.16
TREML1-204ENST00000590581 TDRD9Q8NDG6 1382 aaKnown RBP28.44■■■□□ 2.14
TREML1-204ENST00000590581 WDR97A6NE52 1622 aa28.41■■■□□ 2.14
TREML1-204ENST00000590581 OSCARQ8IYS5 282 aa28.41■■■□□ 2.14
TREML1-204ENST00000590581 SYNJ1O43426 1573 aa28.37■■■□□ 2.13
TREML1-204ENST00000590581 CHD1O14646 1710 aa28.37■■■□□ 2.13
TREML1-204ENST00000590581 BIVM-ERCC5R4GMW8 1640 aa28.35■■■□□ 2.13
TREML1-204ENST00000590581 WRNQ14191 1432 aaPredicted RBP eCLIP28.34■■■□□ 2.13
TREML1-204ENST00000590581 TOP2BQ02880 1626 aa28.32■■■□□ 2.12
TREML1-204ENST00000590581 SNAPC4Q5SXM2 1469 aa28.27■■■□□ 2.12
TREML1-204ENST00000590581 PBRM1Q86U86 1689 aa28.26■■■□□ 2.11
TREML1-204ENST00000590581 ABCA10Q8WWZ4 1543 aa28.25■■■□□ 2.11
TREML1-204ENST00000590581 FBLN2P98095 1184 aa28.23■■■□□ 2.11
TREML1-204ENST00000590581 ABCA5Q8WWZ7 1642 aa28.22■■■□□ 2.11
TREML1-204ENST00000590581 GRIN2BQ13224 1484 aa28.21■■■□□ 2.11
TREML1-204ENST00000590581 GAPVD1Q14C86 1478 aa28.21■■■□□ 2.11
TREML1-204ENST00000590581 MAGI1Q96QZ7 1491 aaPredicted RBP28.15■■■□□ 2.1
TREML1-204ENST00000590581 TRIM41Q8WV44 630 aa28.11■■■□□ 2.09
TREML1-204ENST00000590581 RIMBP3CA6NJZ7 1639 aa28.1■■■□□ 2.09
TREML1-204ENST00000590581 RIMBP3BA6NNM3 1639 aa28.1■■■□□ 2.09
TREML1-204ENST00000590581 RIMBP3Q9UFD9 1639 aa28.1■■■□□ 2.09
TREML1-204ENST00000590581 CHMP7Q8WUX9 453 aaPredicted RBP28.06■■■□□ 2.08
TREML1-204ENST00000590581 SYNJ2O15056 1496 aa28.06■■■□□ 2.08
TREML1-204ENST00000590581 ARHGEF11O15085 1522 aa28.03■■■□□ 2.08
TREML1-204ENST00000590581 ADAMTS12P58397 1594 aa27.97■■■□□ 2.07
TREML1-204ENST00000590581 CLASP1Q7Z460 1538 aa27.97■■■□□ 2.07
TREML1-204ENST00000590581 ERICH3Q5RHP9 1530 aa27.9■■■□□ 2.06
TREML1-204ENST00000590581 GRIN2AQ12879 1464 aa27.87■■■□□ 2.05
TREML1-204ENST00000590581 FHAD1B1AJZ9 1412 aa27.84■■■□□ 2.05
TREML1-204ENST00000590581 ARAP1Q96P48 1450 aa27.81■■■□□ 2.04
TREML1-204ENST00000590581 CEP170Q5SW79 1584 aa27.81■■■□□ 2.04
TREML1-204ENST00000590581 CYB5RLQ6IPT4 315 aa27.77■■■□□ 2.04
TREML1-204ENST00000590581 NUP160Q12769 1436 aa27.74■■■□□ 2.03
TREML1-204ENST00000590581 KIF27Q86VH2 1401 aa27.73■■■□□ 2.03
TREML1-204ENST00000590581 IGF1RP08069 1367 aa27.67■■■□□ 2.02
TREML1-204ENST00000590581 ERCC6L2Q5T890 1561 aa27.65■■■□□ 2.02
TREML1-204ENST00000590581 CUL7Q14999 1698 aa27.63■■■□□ 2.01
TREML1-204ENST00000590581 SHROOM2Q13796 1616 aa27.6■■■□□ 2.01
TREML1-204ENST00000590581 RUSC2Q8N2Y8 1516 aa27.57■■■□□ 2
TREML1-204ENST00000590581 CARMIL1Q5VZK9 1371 aa27.5■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms