RNA–Protein interactions for RNA: ENST00000590498.5

TUBD1-210, Transcript of tubulin delta 1, humanhuman

TSL 4

Gene TUBD1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-210ENST00000590498 AEBP2Q6ZN18 517 aaPredicted RBP28.53■■■□□ 2.16
TUBD1-210ENST00000590498 NISCHQ9Y2I1 1504 aa26.98■■□□□ 1.91
TUBD1-210ENST00000590498 CHIC1Q5VXU3 224 aa26.77■■□□□ 1.88
TUBD1-210ENST00000590498 ABCC9O60706 1549 aa24.45■■□□□ 1.5
TUBD1-210ENST00000590498 SENP3Q9H4L4 574 aaPredicted RBP24.44■■□□□ 1.5
TUBD1-210ENST00000590498 CCDC180Q9P1Z9 1646 aa24.18■■□□□ 1.46
TUBD1-210ENST00000590498 PHF23Q9BUL5 403 aaPredicted RBP24.05■■□□□ 1.44
TUBD1-210ENST00000590498 DNAJC5BQ9UF47 199 aa23.21■■□□□ 1.31
TUBD1-210ENST00000590498 RB1CC1Q8TDY2 1594 aa23.11■■□□□ 1.29
TUBD1-210ENST00000590498 NACADO15069 1562 aa22.93■■□□□ 1.26
TUBD1-210ENST00000590498 DCAF8L2P0C7V8 631 aa22.85■■□□□ 1.25
TUBD1-210ENST00000590498 FOXD1Q16676 465 aa22.79■■□□□ 1.24
TUBD1-210ENST00000590498 PABPN1Q86U42 306 aaKnown RBP eCLIP22.78■■□□□ 1.24
TUBD1-210ENST00000590498 UNC13AQ9UPW8 1703 aa22.62■■□□□ 1.21
TUBD1-210ENST00000590498 MYO15BQ96JP2 1530 aa22.57■■□□□ 1.2
TUBD1-210ENST00000590498 BICRAQ9NZM4 1560 aa22.56■■□□□ 1.2
TUBD1-210ENST00000590498 ZCCHC6Q5VYS8 1495 aaKnown RBP22.31■■□□□ 1.16
TUBD1-210ENST00000590498 DCAF1Q9Y4B6 1507 aa22.24■■□□□ 1.15
TUBD1-210ENST00000590498 SHROOM4Q9ULL8 1493 aa22.09■■□□□ 1.13
TUBD1-210ENST00000590498 SCRIBQ14160 1630 aa22.09■■□□□ 1.13
TUBD1-210ENST00000590498 CC2D2AQ9P2K1 1620 aa22.05■■□□□ 1.12
TUBD1-210ENST00000590498 CECR2Q9BXF3 1484 aa22.01■■□□□ 1.11
TUBD1-210ENST00000590498 EIF4G1Q04637 1599 aaKnown RBP21.95■■□□□ 1.11
TUBD1-210ENST00000590498 POTEDQ86YR6 584 aa21.58■■□□□ 1.05
TUBD1-210ENST00000590498 MSH5O43196 834 aa21.51■■□□□ 1.03
TUBD1-210ENST00000590498 DNAJC5Q9H3Z4 198 aa21.33■■□□□ 1.01
TUBD1-210ENST00000590498 PLPPR3Q6T4P5 718 aa21.24■□□□□ 0.99
TUBD1-210ENST00000590498 NCAPD3P42695 1498 aa21.23■□□□□ 0.99
TUBD1-210ENST00000590498 PIAS4Q8N2W9 510 aaPredicted RBP21.21■□□□□ 0.99
TUBD1-210ENST00000590498 ATAD2BQ9ULI0 1458 aa21.15■□□□□ 0.98
TUBD1-210ENST00000590498 CUX2O14529 1486 aa21.06■□□□□ 0.96
TUBD1-210ENST00000590498 SMARCA4P51532 1647 aa21.05■□□□□ 0.96
TUBD1-210ENST00000590498 ERCC6Q03468 1493 aa21.03■□□□□ 0.96
TUBD1-210ENST00000590498 PPP6R1Q9UPN7 881 aa21.02■□□□□ 0.96
TUBD1-210ENST00000590498 HMGXB3Q12766 1538 aa21■□□□□ 0.95
TUBD1-210ENST00000590498 SMARCA2P51531 1590 aa21■□□□□ 0.95
TUBD1-210ENST00000590498 NESP48681 1621 aa20.99■□□□□ 0.95
TUBD1-210ENST00000590498 ADRA2BP18089 450 aa20.93■□□□□ 0.94
TUBD1-210ENST00000590498 BAZ1AQ9NRL2 1556 aaPredicted RBP20.89■□□□□ 0.94
TUBD1-210ENST00000590498 BAZ1BQ9UIG0 1483 aaKnown RBP20.88■□□□□ 0.93
TUBD1-210ENST00000590498 PEG3Q9GZU2 1588 aa20.85■□□□□ 0.93
TUBD1-210ENST00000590498 MROH2BQ7Z745 1585 aa20.83■□□□□ 0.92
TUBD1-210ENST00000590498 THOC2Q8NI27 1593 aaKnown RBP20.74■□□□□ 0.91
TUBD1-210ENST00000590498 LAMC3Q9Y6N6 1575 aa20.72■□□□□ 0.91
TUBD1-210ENST00000590498 KIF21AQ7Z4S6 1674 aa20.63■□□□□ 0.89
TUBD1-210ENST00000590498 PDS5BQ9NTI5 1447 aa20.61■□□□□ 0.89
TUBD1-210ENST00000590498 CADPSQ9ULU8 1353 aa20.58■□□□□ 0.88
TUBD1-210ENST00000590498 WIZO95785 1651 aa20.54■□□□□ 0.88
TUBD1-210ENST00000590498 MRC2Q9UBG0 1479 aa20.45■□□□□ 0.86
TUBD1-210ENST00000590498 WDR62O43379 1518 aa20.42■□□□□ 0.86
TUBD1-210ENST00000590498 RSF1Q96T23 1441 aaPredicted RBP20.34■□□□□ 0.85
TUBD1-210ENST00000590498 FANCD2Q9BXW9 1451 aa20.32■□□□□ 0.84
TUBD1-210ENST00000590498 CEP164Q9UPV0 1460 aa20.32■□□□□ 0.84
TUBD1-210ENST00000590498 CFTRP13569 1480 aa20.3■□□□□ 0.84
TUBD1-210ENST00000590498 TRIM41Q8WV44 630 aa20.29■□□□□ 0.84
TUBD1-210ENST00000590498 TOP2AP11388 1531 aaKnown RBP20.22■□□□□ 0.83
TUBD1-210ENST00000590498 URB2Q14146 1524 aaKnown RBP20.21■□□□□ 0.83
TUBD1-210ENST00000590498 OSCARQ8IYS5 282 aa20.12■□□□□ 0.81
TUBD1-210ENST00000590498 CCDC88BA6NC98 1476 aa20.06■□□□□ 0.8
TUBD1-210ENST00000590498 ZNF608Q9ULD9 1512 aaPredicted RBP20■□□□□ 0.79
TUBD1-210ENST00000590498 PRDM2Q13029 1718 aa19.96■□□□□ 0.79
TUBD1-210ENST00000590498 IFT140Q96RY7 1462 aa19.93■□□□□ 0.78
TUBD1-210ENST00000590498 TOPBP1Q92547 1522 aa19.93■□□□□ 0.78
TUBD1-210ENST00000590498 RIMBP3CA6NJZ7 1639 aa19.87■□□□□ 0.77
TUBD1-210ENST00000590498 RIMBP3BA6NNM3 1639 aa19.87■□□□□ 0.77
TUBD1-210ENST00000590498 RIMBP3Q9UFD9 1639 aa19.87■□□□□ 0.77
TUBD1-210ENST00000590498 DNMBPQ6XZF7 1577 aa19.81■□□□□ 0.76
TUBD1-210ENST00000590498 EIF4G3O43432 1585 aaKnown RBP19.8■□□□□ 0.76
TUBD1-210ENST00000590498 ABCC8Q09428 1581 aa19.8■□□□□ 0.76
TUBD1-210ENST00000590498 AQRO60306 1485 aaKnown RBP eCLIP19.79■□□□□ 0.76
TUBD1-210ENST00000590498 ARHGEF11O15085 1522 aa19.79■□□□□ 0.76
TUBD1-210ENST00000590498 TARBP1Q13395 1621 aaKnown RBP19.78■□□□□ 0.76
TUBD1-210ENST00000590498 POLA1P09884 1462 aaPredicted RBP19.72■□□□□ 0.75
TUBD1-210ENST00000590498 RAD54L2Q9Y4B4 1467 aa19.69■□□□□ 0.74
TUBD1-210ENST00000590498 CYB5RLQ6IPT4 315 aa19.69■□□□□ 0.74
TUBD1-210ENST00000590498 CHD1O14646 1710 aa19.68■□□□□ 0.74
TUBD1-210ENST00000590498 FBLN2P98095 1184 aa19.65■□□□□ 0.74
TUBD1-210ENST00000590498 TDRD9Q8NDG6 1382 aaKnown RBP19.65■□□□□ 0.74
TUBD1-210ENST00000590498 SOGA1O94964 1423 aa19.63■□□□□ 0.73
TUBD1-210ENST00000590498 ARAP1Q96P48 1450 aa19.61■□□□□ 0.73
TUBD1-210ENST00000590498 FGD5Q6ZNL6 1462 aa19.57■□□□□ 0.72
TUBD1-210ENST00000590498 CUX1P39880 1505 aa19.56■□□□□ 0.72
TUBD1-210ENST00000590498 SNAPC4Q5SXM2 1469 aa19.54■□□□□ 0.72
TUBD1-210ENST00000590498 CLASP1Q7Z460 1538 aa19.49■□□□□ 0.71
TUBD1-210ENST00000590498 TRHP20396 242 aaPredicted RBP19.47■□□□□ 0.71
TUBD1-210ENST00000590498 CHMP7Q8WUX9 453 aaPredicted RBP19.46■□□□□ 0.71
TUBD1-210ENST00000590498 WDR97A6NE52 1622 aa19.45■□□□□ 0.7
TUBD1-210ENST00000590498 GRIN2BQ13224 1484 aa19.44■□□□□ 0.7
TUBD1-210ENST00000590498 MAGI1Q96QZ7 1491 aaPredicted RBP19.44■□□□□ 0.7
TUBD1-210ENST00000590498 SYNJ2O15056 1496 aa19.4■□□□□ 0.7
TUBD1-210ENST00000590498 SYNJ1O43426 1573 aa19.39■□□□□ 0.69
TUBD1-210ENST00000590498 GAPVD1Q14C86 1478 aa19.37■□□□□ 0.69
TUBD1-210ENST00000590498 ABCA10Q8WWZ4 1543 aa19.33■□□□□ 0.68
TUBD1-210ENST00000590498 MAPK8IP2Q13387 824 aaPredicted RBP19.32■□□□□ 0.68
TUBD1-210ENST00000590498 DMRT2Q9Y5R5 561 aa19.32■□□□□ 0.68
TUBD1-210ENST00000590498 PBRM1Q86U86 1689 aa19.32■□□□□ 0.68
TUBD1-210ENST00000590498 ABCA5Q8WWZ7 1642 aa19.31■□□□□ 0.68
TUBD1-210ENST00000590498 SUPT5HO00267 1087 aaKnown RBP19.3■□□□□ 0.68
TUBD1-210ENST00000590498 ERCC6L2Q5T890 1561 aa19.24■□□□□ 0.67
TUBD1-210ENST00000590498 GRIN2AQ12879 1464 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms