RNA–Protein interactions for RNA: ENST00000590472.5

GCDH-211, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 5

Gene GCDH, Length 545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-211ENST00000590472 NISCHQ9Y2I1 1504 aa39.4■■■■□ 3.9
GCDH-211ENST00000590472 CCDC180Q9P1Z9 1646 aa35.14■■■■□ 3.22
GCDH-211ENST00000590472 ABCC9O60706 1549 aa34.58■■■■□ 3.13
GCDH-211ENST00000590472 RB1CC1Q8TDY2 1594 aa33.16■■■□□ 2.9
GCDH-211ENST00000590472 NACADO15069 1562 aa33.07■■■□□ 2.88
GCDH-211ENST00000590472 DCAF8L2P0C7V8 631 aa32.94■■■□□ 2.86
GCDH-211ENST00000590472 MYO15BQ96JP2 1530 aa32.81■■■□□ 2.84
GCDH-211ENST00000590472 ZCCHC6Q5VYS8 1495 aaKnown RBP32.78■■■□□ 2.84
GCDH-211ENST00000590472 DCAF1Q9Y4B6 1507 aa32.58■■■□□ 2.81
GCDH-211ENST00000590472 UNC13AQ9UPW8 1703 aa32.48■■■□□ 2.79
GCDH-211ENST00000590472 PABPN1Q86U42 306 aaKnown RBP eCLIP32.26■■■□□ 2.75
GCDH-211ENST00000590472 BICRAQ9NZM4 1560 aa32.23■■■□□ 2.75
GCDH-211ENST00000590472 SCRIBQ14160 1630 aa32.04■■■□□ 2.72
GCDH-211ENST00000590472 DNAJC5BQ9UF47 199 aa31.98■■■□□ 2.71
GCDH-211ENST00000590472 SHROOM4Q9ULL8 1493 aa31.8■■■□□ 2.68
GCDH-211ENST00000590472 EIF4G1Q04637 1599 aaKnown RBP31.35■■■□□ 2.61
GCDH-211ENST00000590472 CC2D2AQ9P2K1 1620 aa31.29■■■□□ 2.6
GCDH-211ENST00000590472 CECR2Q9BXF3 1484 aa31.09■■■□□ 2.57
GCDH-211ENST00000590472 SMARCA4P51532 1647 aa30.63■■■□□ 2.49
GCDH-211ENST00000590472 BAZ1AQ9NRL2 1556 aaPredicted RBP30.54■■■□□ 2.48
GCDH-211ENST00000590472 NCAPD3P42695 1498 aa30.52■■■□□ 2.48
GCDH-211ENST00000590472 ATAD2BQ9ULI0 1458 aa30.5■■■□□ 2.47
GCDH-211ENST00000590472 SMARCA2P51531 1590 aa30.45■■■□□ 2.46
GCDH-211ENST00000590472 MROH2BQ7Z745 1585 aa30.38■■■□□ 2.45
GCDH-211ENST00000590472 HMGXB3Q12766 1538 aa30.36■■■□□ 2.45
GCDH-211ENST00000590472 PEG3Q9GZU2 1588 aa30.34■■■□□ 2.45
GCDH-211ENST00000590472 BAZ1BQ9UIG0 1483 aaKnown RBP30.23■■■□□ 2.43
GCDH-211ENST00000590472 WIZO95785 1651 aa30.04■■■□□ 2.4
GCDH-211ENST00000590472 RSF1Q96T23 1441 aaPredicted RBP29.93■■■□□ 2.38
GCDH-211ENST00000590472 NESP48681 1621 aa29.89■■■□□ 2.37
GCDH-211ENST00000590472 ERCC6Q03468 1493 aa29.79■■■□□ 2.36
GCDH-211ENST00000590472 LAMC3Q9Y6N6 1575 aa29.75■■■□□ 2.35
GCDH-211ENST00000590472 TOP2AP11388 1531 aaKnown RBP29.69■■■□□ 2.34
GCDH-211ENST00000590472 CADPSQ9ULU8 1353 aa29.6■■■□□ 2.33
GCDH-211ENST00000590472 CUX2O14529 1486 aa29.58■■■□□ 2.33
GCDH-211ENST00000590472 KIF21AQ7Z4S6 1674 aa29.53■■■□□ 2.32
GCDH-211ENST00000590472 PDS5BQ9NTI5 1447 aa29.53■■■□□ 2.32
GCDH-211ENST00000590472 THOC2Q8NI27 1593 aaKnown RBP29.49■■■□□ 2.31
GCDH-211ENST00000590472 CFTRP13569 1480 aa29.41■■■□□ 2.3
GCDH-211ENST00000590472 CCDC88BA6NC98 1476 aa29.34■■■□□ 2.29
GCDH-211ENST00000590472 FANCD2Q9BXW9 1451 aa29.27■■■□□ 2.28
GCDH-211ENST00000590472 MRC2Q9UBG0 1479 aa29.27■■■□□ 2.28
GCDH-211ENST00000590472 CEP164Q9UPV0 1460 aa29.25■■■□□ 2.27
GCDH-211ENST00000590472 WDR62O43379 1518 aa29.2■■■□□ 2.26
GCDH-211ENST00000590472 PRDM2Q13029 1718 aa29.19■■■□□ 2.26
GCDH-211ENST00000590472 URB2Q14146 1524 aaKnown RBP29.02■■■□□ 2.24
GCDH-211ENST00000590472 SUPT5HO00267 1087 aaKnown RBP28.95■■■□□ 2.22
GCDH-211ENST00000590472 DNAJC5Q9H3Z4 198 aa28.94■■■□□ 2.22
GCDH-211ENST00000590472 TOPBP1Q92547 1522 aa28.79■■■□□ 2.2
GCDH-211ENST00000590472 ABCC8Q09428 1581 aa28.74■■■□□ 2.19
GCDH-211ENST00000590472 DNMBPQ6XZF7 1577 aa28.74■■■□□ 2.19
GCDH-211ENST00000590472 IFT140Q96RY7 1462 aa28.65■■■□□ 2.18
GCDH-211ENST00000590472 ZNF608Q9ULD9 1512 aaPredicted RBP28.57■■■□□ 2.16
GCDH-211ENST00000590472 POLA1P09884 1462 aaPredicted RBP28.53■■■□□ 2.16
GCDH-211ENST00000590472 TARBP1Q13395 1621 aaKnown RBP28.52■■■□□ 2.16
GCDH-211ENST00000590472 CUX1P39880 1505 aa28.51■■■□□ 2.15
GCDH-211ENST00000590472 EIF4G3O43432 1585 aaKnown RBP28.45■■■□□ 2.14
GCDH-211ENST00000590472 FGD5Q6ZNL6 1462 aa28.43■■■□□ 2.14
GCDH-211ENST00000590472 RAD54L2Q9Y4B4 1467 aa28.41■■■□□ 2.14
GCDH-211ENST00000590472 SOGA1O94964 1423 aa28.39■■■□□ 2.14
GCDH-211ENST00000590472 AQRO60306 1485 aaKnown RBP eCLIP28.36■■■□□ 2.137e-7■■■■■ 35.2
GCDH-211ENST00000590472 OSCARQ8IYS5 282 aa28.29■■■□□ 2.12
GCDH-211ENST00000590472 TDRD9Q8NDG6 1382 aaKnown RBP28.27■■■□□ 2.12
GCDH-211ENST00000590472 WDR97A6NE52 1622 aa28.25■■■□□ 2.11
GCDH-211ENST00000590472 BIVM-ERCC5R4GMW8 1640 aa28.21■■■□□ 2.11
GCDH-211ENST00000590472 WRNQ14191 1432 aaPredicted RBP eCLIP28.2■■■□□ 2.11
GCDH-211ENST00000590472 TOP2BQ02880 1626 aa28.2■■■□□ 2.1
GCDH-211ENST00000590472 SYNJ1O43426 1573 aa28.19■■■□□ 2.1
GCDH-211ENST00000590472 CHD1O14646 1710 aa28.15■■■□□ 2.1
GCDH-211ENST00000590472 ABCA10Q8WWZ4 1543 aa28.14■■■□□ 2.1
GCDH-211ENST00000590472 GRIN2BQ13224 1484 aa28.09■■■□□ 2.09
GCDH-211ENST00000590472 SNAPC4Q5SXM2 1469 aa28.09■■■□□ 2.09
GCDH-211ENST00000590472 ABCA5Q8WWZ7 1642 aa28.08■■■□□ 2.09
GCDH-211ENST00000590472 GAPVD1Q14C86 1478 aa28.06■■■□□ 2.08
GCDH-211ENST00000590472 PBRM1Q86U86 1689 aa28.06■■■□□ 2.08
GCDH-211ENST00000590472 MAGI1Q96QZ7 1491 aaPredicted RBP28.04■■■□□ 2.08
GCDH-211ENST00000590472 FBLN2P98095 1184 aa28.02■■■□□ 2.08
GCDH-211ENST00000590472 SYNJ2O15056 1496 aa27.95■■■□□ 2.06
GCDH-211ENST00000590472 RIMBP3CA6NJZ7 1639 aa27.92■■■□□ 2.06
GCDH-211ENST00000590472 RIMBP3BA6NNM3 1639 aa27.92■■■□□ 2.06
GCDH-211ENST00000590472 RIMBP3Q9UFD9 1639 aa27.92■■■□□ 2.06
GCDH-211ENST00000590472 CHMP7Q8WUX9 453 aaPredicted RBP27.91■■■□□ 2.06
GCDH-211ENST00000590472 ARHGEF11O15085 1522 aa27.87■■■□□ 2.05
GCDH-211ENST00000590472 TRIM41Q8WV44 630 aa27.86■■■□□ 2.05
GCDH-211ENST00000590472 CLASP1Q7Z460 1538 aa27.83■■■□□ 2.05
GCDH-211ENST00000590472 ADAMTS12P58397 1594 aa27.81■■■□□ 2.04
GCDH-211ENST00000590472 ERICH3Q5RHP9 1530 aa27.79■■■□□ 2.04
GCDH-211ENST00000590472 GRIN2AQ12879 1464 aa27.74■■■□□ 2.03
GCDH-211ENST00000590472 FHAD1B1AJZ9 1412 aa27.73■■■□□ 2.03
GCDH-211ENST00000590472 ARAP1Q96P48 1450 aa27.64■■■□□ 2.02
GCDH-211ENST00000590472 CEP170Q5SW79 1584 aa27.64■■■□□ 2.01
GCDH-211ENST00000590472 NUP160Q12769 1436 aa27.63■■■□□ 2.01
GCDH-211ENST00000590472 KIF27Q86VH2 1401 aa27.62■■■□□ 2.01
GCDH-211ENST00000590472 CYB5RLQ6IPT4 315 aa27.6■■■□□ 2.01
GCDH-211ENST00000590472 IGF1RP08069 1367 aa27.56■■■□□ 2
GCDH-211ENST00000590472 CUL7Q14999 1698 aa27.5■■□□□ 1.99
GCDH-211ENST00000590472 SHROOM2Q13796 1616 aa27.48■■□□□ 1.99
GCDH-211ENST00000590472 ERCC6L2Q5T890 1561 aa27.45■■□□□ 1.99
GCDH-211ENST00000590472 RUSC2Q8N2Y8 1516 aa27.41■■□□□ 1.98
GCDH-211ENST00000590472 CARMIL1Q5VZK9 1371 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms